Hyperspectral Image Classification

Hyperspectral image (HSI) classification is a phenomenal mechanism to analyze diversified land cover in remotely sensed hyperspectral images. In the field of remote sensing, HSI classification has been an established research topic, and herein, the inherent primary challenges are (i) curse of dimensionality and (ii) insufficient samples pool during training. Given a set of observations with known class labels, the basic goal of hyperspectral image classification is to assign a class label to each pixel. This chapter discusses the recent progress in the classification of HS images in the aspects of Kernel-based methods, supervised and unsupervised classifiers, classification based on sparse representation, and spectral-spatial classification. Further, the classification methods based on machine learning and the future directions are discussed

Face Recognition and Facial Attribute Analysis from Unconstrained Visual Data

Analyzing human faces from visual data has been one of the most active research areas in the computer vision community. However, it is a very challenging problem in unconstrained environments due to variations in pose, illumination, expression, occlusion and blur between training and testing images. The task becomes even more difficult when only a limited number of images per subject is available for modeling these variations. In this dissertation, different techniques for performing classification of human faces as well as other facial attributes such as expression, age, gender, and head pose in uncontrolled settings are investigated. In the first part of the dissertation, a method for reconstructing the virtual frontal view from a given non-frontal face image using Markov Random Fields (MRFs) and an efficient variant of the Belief Propagation (BP) algorithm is introduced. In the proposed approach, the input face image is divided into a grid of overlapping patches and a globally optimal set of local warps is estimated to synthesize the patches at the frontal view. A set of possible warps for each patch is obtained by aligning it with images from a training database of frontal faces. The alignments are performed efficiently in the Fourier domain using an extension of the Lucas-Kanade (LK) algorithm that can handle illumination variations. The problem of finding the optimal warps is then formulated as a discrete labeling problem using an MRF. The reconstructed frontal face image can then be used with any face recognition technique. The two main advantages of our method are that it does not require manually selected facial landmarks as well as no head pose estimation is needed. In the second part, the task of face recognition in unconstrained settings is formulated as a domain adaptation problem. The domain shift is accounted for by deriving a latent subspace or domain, which jointly characterizes the multifactor variations using appropriate image formation models for each factor. The latent domain is defined as a product of Grassmann manifolds based on the underlying geometry of the tensor space, and recognition is performed across domain shift using statistics consistent with the tensor geometry. More specifically, given a face image from the source or target domain, multiple images of that subject are first synthesized under different illuminations, blur conditions, and 2D perturbations to form a tensor representation of the face. The orthogonal matrices obtained from the decomposition of this tensor, where each matrix corresponds to a factor variation, are used to characterize the subject as a point on a product of Grassmann manifolds. For cases with only one image per subject in the source domain, the identity of target domain faces is estimated using the geodesic distance on product manifolds. When multiple images per subject are available, an extension of kernel discriminant analysis is developed using a novel kernel based on the projection metric on product spaces. Furthermore, a probabilistic approach to the problem of classifying image sets on product manifolds is introduced. Understanding attributes such as expression, age class, and gender from face images has many applications in multimedia processing including content personalization, human-computer interaction, and facial identification. To achieve good performance in these tasks, it is important to be able to extract pertinent visual structures from the input data. In the third part of the dissertation, a fully automatic approach for performing classification of facial attributes based on hierarchical feature learning using sparse coding is presented. The proposed approach is generative in the sense that it does not use label information in the process of feature learning. As a result, the same feature representation can be applied for different tasks such as expression, age, and gender classification. Final classification is performed by linear SVM trained with the corresponding labels for each task. The last part of the dissertation presents an automatic algorithm for determining the head pose from a given face image. The face image is divided into a regular grid and represented by dense SIFT descriptors extracted from the grid points. Random Projection (RP) is then applied to reduce the dimension of the concatenated SIFT descriptor vector. Classification and regression using Support Vector Machine (SVM) are combined in order to obtain an accurate estimate of the head pose. The advantage of the proposed approach is that it does not require facial landmarks such as the eye and mouth corners, the nose tip to be extracted from the input face image as in many other methods

Toward sparse and geometry adapted video approximations

Video signals are sequences of natural images, where images are often modeled as piecewise-smooth signals. Hence, video can be seen as a 3D piecewise-smooth signal made of piecewise-smooth regions that move through time. Based on the piecewise-smooth model and on related theoretical work on rate-distortion performance of wavelet and oracle based coding schemes, one can better analyze the appropriate coding strategies that adaptive video codecs need to implement in order to be efficient. Efficient video representations for coding purposes require the use of adaptive signal decompositions able to capture appropriately the structure and redundancy appearing in video signals. Adaptivity needs to be such that it allows for proper modeling of signals in order to represent these with the lowest possible coding cost. Video is a very structured signal with high geometric content. This includes temporal geometry (normally represented by motion information) as well as spatial geometry. Clearly, most of past and present strategies used to represent video signals do not exploit properly its spatial geometry. Similarly to the case of images, a very interesting approach seems to be the decomposition of video using large over-complete libraries of basis functions able to represent salient geometric features of the signal. In the framework of video, these features should model 2D geometric video components as well as their temporal evolution, forming spatio-temporal 3D geometric primitives. Through this PhD dissertation, different aspects on the use of adaptivity in video representation are studied looking toward exploiting both aspects of video: its piecewise nature and the geometry. The first part of this work studies the use of localized temporal adaptivity in subband video coding. This is done considering two transformation schemes used for video coding: 3D wavelet representations and motion compensated temporal filtering. A theoretical R-D analysis as well as empirical results demonstrate how temporal adaptivity improves coding performance of moving edges in 3D transform (without motion compensation) based video coding. Adaptivity allows, at the same time, to equally exploit redundancy in non-moving video areas. The analogy between motion compensated video and 1D piecewise-smooth signals is studied as well. This motivates the introduction of local length adaptivity within frame-adaptive motion compensated lifted wavelet decompositions. This allows an optimal rate-distortion performance when video motion trajectories are shorter than the transformation "Group Of Pictures", or when efficient motion compensation can not be ensured. After studying temporal adaptivity, the second part of this thesis is dedicated to understand the fundamentals of how can temporal and spatial geometry be jointly exploited. This work builds on some previous results that considered the representation of spatial geometry in video (but not temporal, i.e, without motion). In order to obtain flexible and efficient (sparse) signal representations, using redundant dictionaries, the use of highly non-linear decomposition algorithms, like Matching Pursuit, is required. General signal representation using these techniques is still quite unexplored. For this reason, previous to the study of video representation, some aspects of non-linear decomposition algorithms and the efficient decomposition of images using Matching Pursuits and a geometric dictionary are investigated. A part of this investigation concerns the study on the influence of using a priori models within approximation non-linear algorithms. Dictionaries with a high internal coherence have some problems to obtain optimally sparse signal representations when used with Matching Pursuits. It is proved, theoretically and empirically, that inserting in this algorithm a priori models allows to improve the capacity to obtain sparse signal approximations, mainly when coherent dictionaries are used. Another point discussed in this preliminary study, on the use of Matching Pursuits, concerns the approach used in this work for the decompositions of video frames and images. The technique proposed in this thesis improves a previous work, where authors had to recur to sub-optimal Matching Pursuit strategies (using Genetic Algorithms), given the size of the functions library. In this work the use of full search strategies is made possible, at the same time that approximation efficiency is significantly improved and computational complexity is reduced. Finally, a priori based Matching Pursuit geometric decompositions are investigated for geometric video representations. Regularity constraints are taken into account to recover the temporal evolution of spatial geometric signal components. The results obtained for coding and multi-modal (audio-visual) signal analysis, clarify many unknowns and show to be promising, encouraging to prosecute research on the subject

MEDICAL SIGNALS ALIGNMENT AND PRIVACY PROTECTION USING BELIEF PROPAGATION AND COMPRESSED SENSING

The advance in human genome sequencing technology has significantly reduced the cost of data generation and overwhelms the computing capability of sequence analysis. Efficiency, efficacy and scalability remain challenging in sequence alignment, which is an important and foundational operation for genome data analysis. In this dissemination, I propose a two stage approach to tackle this problem. In the preprocessing step, I match blocks of reference and target genome sequences based on the similarities between their empirical transition probability distributions using belief propagation. I then conduct a refined match using our recently published SCoBeP technique. I extract features from neighbors of an input nucleotide (a genome sequence of neighboring nucleotides that the input nucleotide is its middle nucleotide) and leverage sparse coding to find a set of candidate nucleotides, followed by using Belief Propagation (BP) to rank these candidates. Our experimental results demonstrated robustness in nucleotide sequence alignment and our results are competitive to those of the SOAP aligner and the BWA algorithm . In addition, Most genomic datasets are not publicly accessible, due to privacy concerns. Patients genomic data contains identifiable markers and can be used to determine the presence of an individual in a dataset. Prior research shows that the re-identification can be possible when a very small set of genomic data is released. To protect patients, the data owners impose an application and evaluation procedure which often takes months to complete and limits the researchers. One solution to the problem is to let each data owner publish a set of pilot data to help data users choose the right datasets based on their needs. The data owners release these pilot data with the noise parameters and the mechanism that they used. A data user can run any kind of association tests and compare the outcomes with the other datasets outputs to get an idea which datasets can be useful. I present a privacy preserving genomic data dissemination algorithm based on the compressed sensing. In my proposed method, I am adding the noise into the sparse representation of the input vector to make it differentially private. It means I find the sparse representation using using the SubSpace Pursuit and then disturb it with sufficient Laplasian noise. I compare my method with state-of-the-art compressed sensing privacy protection method