Detecting Community Structure in Dynamic Social Networks Using the Concept of Leadership

Detecting community structure in social networks is a fundamental problem empowering us to identify groups of actors with similar interests. There have been extensive works focusing on finding communities in static networks, however, in reality, due to dynamic nature of social networks, they are evolving continuously. Ignoring the dynamic aspect of social networks, neither allows us to capture evolutionary behavior of the network nor to predict the future status of individuals. Aside from being dynamic, another significant characteristic of real-world social networks is the presence of leaders, i.e. nodes with high degree centrality having a high attraction to absorb other members and hence to form a local community. In this paper, we devised an efficient method to incrementally detect communities in highly dynamic social networks using the intuitive idea of importance and persistence of community leaders over time. Our proposed method is able to find new communities based on the previous structure of the network without recomputing them from scratch. This unique feature, enables us to efficiently detect and track communities over time rapidly. Experimental results on the synthetic and real-world social networks demonstrate that our method is both effective and efficient in discovering communities in dynamic social networks

Genetic algorithm based two-mode clustering of metabolomics data

Metabolomics and other omics tools are generally characterized by large data sets with many variables obtained under different environmental conditions. Clustering methods and more specifically two-mode clustering methods are excellent tools for analyzing this type of data. Two-mode clustering methods allow for analysis of the behavior of subsets of metabolites under different experimental conditions. In addition, the results are easily visualized. In this paper we introduce a two-mode clustering method based on a genetic algorithm that uses a criterion that searches for homogeneous clusters. Furthermore we introduce a cluster stability criterion to validate the clusters and we provide an extended knee plot to select the optimal number of clusters in both experimental and metabolite modes. The genetic algorithm-based two-mode clustering gave biological relevant results when it was applied to two real life metabolomics data sets. It was, for instance, able to identify a catabolic pathway for growth on several of the carbon sources

Role based behavior analysis

Tese de mestrado, Segurança Informática, Universidade de Lisboa, Faculdade de Ciências, 2009Nos nossos dias, o sucesso de uma empresa depende da sua agilidade e capacidade de se adaptar a condições que se alteram rapidamente. Dois requisitos para esse sucesso são trabalhadores proactivos e uma infra-estrutura ágil de Tecnologias de Informacão/Sistemas de Informação (TI/SI) que os consiga suportar. No entanto, isto nem sempre sucede. Os requisitos dos utilizadores ao nível da rede podem nao ser completamente conhecidos, o que causa atrasos nas mudanças de local e reorganizações. Além disso, se não houver um conhecimento preciso dos requisitos, a infraestrutura de TI/SI poderá ser utilizada de forma ineficiente, com excessos em algumas áreas e deficiências noutras. Finalmente, incentivar a proactividade não implica acesso completo e sem restrições, uma vez que pode deixar os sistemas vulneráveis a ameaças externas e internas. O objectivo do trabalho descrito nesta tese é desenvolver um sistema que consiga caracterizar o comportamento dos utilizadores do ponto de vista da rede. Propomos uma arquitectura de sistema modular para extrair informação de fluxos de rede etiquetados. O processo é iniciado com a criação de perfis de utilizador a partir da sua informação de fluxos de rede. Depois, perfis com características semelhantes são agrupados automaticamente, originando perfis de grupo. Finalmente, os perfis individuais são comprados com os perfis de grupo, e os que diferem significativamente são marcados como anomalias para análise detalhada posterior. Considerando esta arquitectura, propomos um modelo para descrever o comportamento de rede dos utilizadores e dos grupos. Propomos ainda métodos de visualização que permitem inspeccionar rapidamente toda a informação contida no modelo. O sistema e modelo foram avaliados utilizando um conjunto de dados reais obtidos de um operador de telecomunicações. Os resultados confirmam que os grupos projectam com precisão comportamento semelhante. Além disso, as anomalias foram as esperadas, considerando a população subjacente. Com a informação que este sistema consegue extrair dos dados em bruto, as necessidades de rede dos utilizadores podem sem supridas mais eficazmente, os utilizadores suspeitos são assinalados para posterior análise, conferindo uma vantagem competitiva a qualquer empresa que use este sistema.In our days, the success of a corporation hinges on its agility and ability to adapt to fast changing conditions. Proactive workers and an agile IT/IS infrastructure that can support them is a requirement for this success. Unfortunately, this is not always the case. The user’s network requirements may not be fully understood, which slows down relocation and reorganization. Also, if there is no grasp on the real requirements, the IT/IS infrastructure may not be efficiently used, with waste in some areas and deficiencies in others. Finally, enabling proactivity does not mean full unrestricted access, since this may leave the systems vulnerable to outsider and insider threats. The purpose of the work described on this thesis is to develop a system that can characterize user network behavior. We propose a modular system architecture to extract information from tagged network flows. The system process begins by creating user profiles from their network flows’ information. Then, similar profiles are automatically grouped into clusters, creating role profiles. Finally, the individual profiles are compared against the roles, and the ones that differ significantly are flagged as anomalies for further inspection. Considering this architecture, we propose a model to describe user and role network behavior. We also propose visualization methods to quickly inspect all the information contained in the model. The system and model were evaluated using a real dataset from a large telecommunications operator. The results confirm that the roles accurately map similar behavior. The anomaly results were also expected, considering the underlying population. With the knowledge that the system can extract from the raw data, the users network needs can be better fulfilled, the anomalous users flagged for inspection, giving an edge in agility for any company that uses it

Measuring Cluster Stability for Bayesian Nonparametrics Using the Linear Bootstrap

Clustering procedures typically estimate which data points are clustered together, a quantity of primary importance in many analyses. Often used as a preliminary step for dimensionality reduction or to facilitate interpretation, finding robust and stable clusters is often crucial for appropriate for downstream analysis. In the present work, we consider Bayesian nonparametric (BNP) models, a particularly popular set of Bayesian models for clustering due to their flexibility. Because of its complexity, the Bayesian posterior often cannot be computed exactly, and approximations must be employed. Mean-field variational Bayes forms a posterior approximation by solving an optimization problem and is widely used due to its speed. An exact BNP posterior might vary dramatically when presented with different data. As such, stability and robustness of the clustering should be assessed. A popular mean to assess stability is to apply the bootstrap by resampling the data, and rerun the clustering for each simulated data set. The time cost is thus often very expensive, especially for the sort of exploratory analysis where clustering is typically used. We propose to use a fast and automatic approximation to the full bootstrap called the "linear bootstrap", which can be seen by local data perturbation. In this work, we demonstrate how to apply this idea to a data analysis pipeline, consisting of an MFVB approximation to a BNP clustering posterior of time course gene expression data. We show that using auto-differentiation tools, the necessary calculations can be done automatically, and that the linear bootstrap is a fast but approximate alternative to the bootstrap.Comment: 9 pages, NIPS 2017 Advances in Approximate Bayesian Inference Worksho