Fewest repetitions in infinite binary words

A square is the concatenation of a nonempty word with itself. A word has period p if its letters at distance p match. The exponent of a nonempty word is the quotient of its length over its smallest period. In this article we give a proof of the fact that there exists an infinite binary word which contains finitely many squares and simultaneously avoids words of exponent larger than 7/3. Our infinite word contains 12 squares, which is the smallest possible number of squares to get the property, and 2 factors of exponent 7/3. These are the only factors of exponent larger than 2. The value 7/3 introduces what we call the finite-repetition threshold of the binary alphabet. We conjecture it is 7/4 for the ternary alphabet, like its repetitive threshold

Finite-Repetition threshold for infinite ternary words

The exponent of a word is the ratio of its length over its smallest period. The repetitive threshold r(a) of an a-letter alphabet is the smallest rational number for which there exists an infinite word whose finite factors have exponent at most r(a). This notion was introduced in 1972 by Dejean who gave the exact values of r(a) for every alphabet size a as it has been eventually proved in 2009. The finite-repetition threshold for an a-letter alphabet refines the above notion. It is the smallest rational number FRt(a) for which there exists an infinite word whose finite factors have exponent at most FRt(a) and that contains a finite number of factors with exponent r(a). It is known from Shallit (2008) that FRt(2)=7/3. With each finite-repetition threshold is associated the smallest number of r(a)-exponent factors that can be found in the corresponding infinite word. It has been proved by Badkobeh and Crochemore (2010) that this number is 12 for infinite binary words whose maximal exponent is 7/3. We show that FRt(3)=r(3)=7/4 and that the bound is achieved with an infinite word containing only two 7/4-exponent words, the smallest number. Based on deep experiments we conjecture that FRt(4)=r(4)=7/5. The question remains open for alphabets with more than four letters. Keywords: combinatorics on words, repetition, repeat, word powers, word exponent, repetition threshold, pattern avoidability, word morphisms.Comment: In Proceedings WORDS 2011, arXiv:1108.341

The Material Theory of Induction

The fundamental burden of a theory of inductive inference is to determine which are the good inductive inferences or relations of inductive support and why it is that they are so. The traditional approach is modeled on that taken in accounts of deductive inference. It seeks universally applicable schemas or rules or a single formal device, such as the probability calculus. After millennia of halting efforts, none of these approaches has been unequivocally successful and debates between approaches persist. The Material Theory of Induction identifies the source of these enduring problems in the assumption taken at the outset: that inductive inference can be accommodated by a single formal account with universal applicability. Instead, it argues that that there is no single, universally applicable formal account. Rather, each domain has an inductive logic native to it.The content of that logic and where it can be applied are determined by the facts prevailing in that domain. Paying close attention to how inductive inference is conducted in science and copiously illustrated with real-world examples, The Material Theory of Induction will initiate a new tradition in the analysis of inductive inference

Decomposition Methods for Nonlinear Optimization and Data Mining

We focus on two central themes in this dissertation. The first one is on decomposing polytopes and polynomials in ways that allow us to perform nonlinear optimization. We start off by explaining important results on decomposing a polytope into special polyhedra. We use these decompositions and develop methods for computing a special class of integrals exactly. Namely, we are interested in computing the exact value of integrals of polynomial functions over convex polyhedra. We present prior work and new extensions of the integration algorithms. Every integration method we present requires that the polynomial has a special form. We explore two special polynomial decomposition algorithms that are useful for integrating polynomial functions. Both polynomial decompositions have strengths and weaknesses, and we experiment with how to practically use them. After developing practical algorithms and efficient software tools for integrating a polynomial over a polytope, we focus on the problem of maximizing a polynomial function over the continuous domain of a polytope. This maximization problem is NP-hard, but we develop approximation methods that run in polynomial time when the dimension is fixed. Moreover, our algorithm for approximating the maximum of a polynomial over a polytope is related to integrating the polynomial over the polytope. We show how the integration methods can be used for optimization. The second central topic in this dissertation is on problems in data science. We first consider a heuristic for mixed-integer linear optimization. We show how many practical mixed-integer linear have a special substructure containing set partition constraints. We then describe a nice data structure for finding feasible zero-one integer solutions to systems of set partition constraints. Finally, we end with an applied project using data science methods in medical research.Comment: PHD Thesis of Brandon Dutr

Statistical Physics of Design

Modern life increasingly relies on complex products that perform a variety of functions. The key difficulty of creating such products lies not in the manufacturing process, but in the design process. However, design problems are typically driven by multiple contradictory objectives and different stakeholders, have no obvious stopping criteria, and frequently prevent construction of prototypes or experiments. Such ill-defined, or "wicked" problems cannot be "solved" in the traditional sense with optimization methods. Instead, modern design techniques are focused on generating knowledge about the alternative solutions in the design space. In order to facilitate such knowledge generation, in this dissertation I develop the "Systems Physics" framework that treats the emergent structures within the design space as physical objects that interact via quantifiable forces. Mathematically, Systems Physics is based on maximal entropy statistical mechanics, which allows both drawing conceptual analogies between design problems and collective phenomena and performing numerical calculations to gain quantitative understanding. Systems Physics operates via a Model-Compute-Learn loop, with each step refining our thinking of design problems. I demonstrate the capabilities of Systems Physics in two very distinct case studies: Naval Engineering and self-assembly. For the Naval Engineering case, I focus on an established problem of arranging shipboard systems within the available hull space. I demonstrate the essential trade-off between minimizing the routing cost and maximizing the design flexibility, which can lead to abrupt phase transitions. I show how the design space can break into several locally optimal architecture classes that have very different robustness to external couplings. I illustrate how the topology of the shipboard functional network enters a tight interplay with the spatial constraints on placement. For the self-assembly problem, I show that the topology of self-assembled structures can be reliably encoded in the properties of the building blocks so that the structure and the blocks can be jointly designed. The work presented here provides both conceptual and quantitative advancements. In order to properly port the language and the formalism of statistical mechanics to the design domain, I critically re-examine such foundational ideas as system-bath coupling, coarse graining, particle distinguishability, and direct and emergent interactions. I show that the design space can be packed into a special information structure, a tensor network, which allows seamless transition from graphical visualization to sophisticated numerical calculations. This dissertation provides the first quantitative treatment of the design problem that is not reduced to the narrow goals of mathematical optimization. Using statistical mechanics perspective allows me to move beyond the dichotomy of "forward" and "inverse" design and frame design as a knowledge generation process instead. Such framing opens the way to further studies of the design space structures and the time- and path-dependent phenomena in design. The present work also benefits from, and contributes to the philosophical interpretations of statistical mechanics developed by the soft matter community in the past 20 years. The discussion goes far beyond physics and engages with literature from materials science, naval engineering, optimization problems, design theory, network theory, and economic complexity.PHDPhysicsUniversity of Michigan, Horace H. Rackham School of Graduate Studieshttp://deepblue.lib.umich.edu/bitstream/2027.42/163133/1/aklishin_1.pd

Selected Topics in Gravity, Field Theory and Quantum Mechanics

Quantum field theory has achieved some extraordinary successes over the past sixty years; however, it retains a set of challenging problems. It is not yet able to describe gravity in a mathematically consistent manner. CP violation remains unexplained. Grand unified theories have been eliminated by experiment, and a viable unification model has yet to replace them. Even the highly successful quantum chromodynamics, despite significant computational achievements, struggles to provide theoretical insight into the low-energy regime of quark physics, where the nature and structure of hadrons are determined. The only proposal for resolving the fine-tuning problem, low-energy supersymmetry, has been eliminated by results from the LHC. Since mathematics is the true and proper language for quantitative physical models, we expect new mathematical constructions to provide insight into physical phenomena and fresh approaches for building physical theories