Iso-energy-efficiency: An approach to power-constrained parallel computation

Future large scale high performance supercomputer systems require high energy efficiency to achieve exaflops computational power and beyond. Despite the need to understand energy efficiency in high-performance systems, there are few techniques to evaluate energy efficiency at scale. In this paper, we propose a system-level iso-energy-efficiency model to analyze, evaluate and predict energy-performance of data intensive parallel applications with various execution patterns running on large scale power-aware clusters. Our analytical model can help users explore the effects of machine and application dependent characteristics on system energy efficiency and isolate efficient ways to scale system parameters (e.g. processor count, CPU power/frequency, workload size and network bandwidth) to balance energy use and performance. We derive our iso-energy-efficiency model and apply it to the NAS Parallel Benchmarks on two power-aware clusters. Our results indicate that the model accurately predicts total system energy consumption within 5% error on average for parallel applications with various execution and communication patterns. We demonstrate effective use of the model for various application contexts and in scalability decision-making

Improving the Performance and Energy Efficiency of GPGPU Computing through Adaptive Cache and Memory Management Techniques

Department of Computer Science and EngineeringAs the performance and energy efficiency requirement of GPGPUs have risen, memory management techniques of GPGPUs have improved to meet the requirements by employing hardware caches and utilizing heterogeneous memory. These techniques can improve GPGPUs by providing lower latency and higher bandwidth of the memory. However, these methods do not always guarantee improved performance and energy efficiency due to the small cache size and heterogeneity of the memory nodes. While prior works have proposed various techniques to address this issue, relatively little work has been done to investigate holistic support for memory management techniques. In this dissertation, we analyze performance pathologies and propose various techniques to improve memory management techniques. First, we investigate the effectiveness of advanced cache indexing (ACI) for high-performance and energy-efficient GPGPU computing. Specifically, we discuss the designs of various static and adaptive cache indexing schemes and present implementation for GPGPUs. We then quantify and analyze the effectiveness of the ACI schemes based on a cycle-accurate GPGPU simulator. Our quantitative evaluation shows that ACI schemes achieve significant performance and energy-efficiency gains over baseline conventional indexing scheme. We also analyze the performance sensitivity of ACI to key architectural parameters (i.e., capacity, associativity, and ICN bandwidth) and the cache indexing latency. We also demonstrate that ACI continues to achieve high performance in various settings. Second, we propose IACM, integrated adaptive cache management for high-performance and energy-efficient GPGPU computing. Based on the performance pathology analysis of GPGPUs, we integrate state-of-the-art adaptive cache management techniques (i.e., cache indexing, bypassing, and warp limiting) in a unified architectural framework to eliminate performance pathologies. Our quantitative evaluation demonstrates that IACM significantly improves the performance and energy efficiency of various GPGPU workloads over the baseline architecture (i.e., 98.1% and 61.9% on average, respectively) and achieves considerably higher performance than the state-of-the-art technique (i.e., 361.4% at maximum and 7.7% on average). Furthermore, IACM delivers significant performance and energy efficiency gains over the baseline GPGPU architecture even when enhanced with advanced architectural technologies (e.g., higher capacity, associativity). Third, we propose bandwidth- and latency-aware page placement (BLPP) for GPGPUs with heterogeneous memory. BLPP analyzes the characteristics of a application and determines the optimal page allocation ratio between the GPU and CPU memory. Based on the optimal page allocation ratio, BLPP dynamically allocate pages across the heterogeneous memory nodes. Our experimental results show that BLPP considerably outperforms the baseline and state-of-the-art technique (i.e., 13.4% and 16.7%) and performs similar to the static-best version (i.e., 1.2% difference), which requires extensive offline profiling.clos

Tackling Exascale Software Challenges in Molecular Dynamics Simulations with GROMACS

GROMACS is a widely used package for biomolecular simulation, and over the last two decades it has evolved from small-scale efficiency to advanced heterogeneous acceleration and multi-level parallelism targeting some of the largest supercomputers in the world. Here, we describe some of the ways we have been able to realize this through the use of parallelization on all levels, combined with a constant focus on absolute performance. Release 4.6 of GROMACS uses SIMD acceleration on a wide range of architectures, GPU offloading acceleration, and both OpenMP and MPI parallelism within and between nodes, respectively. The recent work on acceleration made it necessary to revisit the fundamental algorithms of molecular simulation, including the concept of neighborsearching, and we discuss the present and future challenges we see for exascale simulation - in particular a very fine-grained task parallelism. We also discuss the software management, code peer review and continuous integration testing required for a project of this complexity.Comment: EASC 2014 conference proceedin