On Energy-efficient Checkpointing in High-throughput Cycle-stealing Distributed Systems

Checkpointing is a fault-tolerance mechanism commonly used in High Throughput Computing (HTC) environments to allow the execution of long-running computational tasks on compute resources subject to hardware and software failures and interruptions from resource owners. With increasing scrutiny of the energy consumption of IT infrastructures, it is important to understand the impact of checkpointing on the energy consumption of HTC environments. In this paper we demonstrate through trace-driven simulation on real-world datasets that existing checkpointing strategies are inadequate at maintaining an acceptable level of energy consumption whilst reducing the makespan of tasks. Furthermore, we identify factors important in deciding whether to employ checkpointing within an HTC environment, and propose novel strategies to curtail the energy consumption of checkpointing approaches

멀티 태스킹 환경에서 GPU를 사용한 범용적 계산 응용의 효율적인 시스템 자원 활용을 위한 GPU 시스템 최적화

학위논문 (박사) -- 서울대학교 대학원 : 공과대학 전기·컴퓨터공학부, 2020. 8. 염헌영.Recently, General Purpose GPU (GPGPU) applications are playing key roles in many different research fields, such as high-performance computing (HPC) and deep learning (DL). The common feature exists in these applications is that all of them require massive computation power, which follows the high parallelism characteristics of the graphics processing unit (GPU). However, because of the resource usage pattern of each GPGPU application varies, a single application cannot fully exploit the GPU systems resources to achieve the best performance of the GPU since the GPU system is designed to provide system-level fairness to all applications instead of optimizing for a specific type. GPU multitasking can address the issue by co-locating multiple kernels with diverse resource usage patterns to share the GPU resource in parallel. However, the current GPU mul- titasking scheme focuses just on co-launching the kernels rather than making them execute more efficiently. Besides, the current GPU multitasking scheme is not open-sourced, which makes it more difficult to be optimized, since the GPGPU applications and the GPU system are unaware of the feature of each other. In this dissertation, we claim that using the support from framework between the GPU system and the GPGPU applications without modifying the application can yield better performance. We design and implement the frame- work while addressing two issues in GPGPU applications. First, we introduce a GPU memory checkpointing approach between the host memory and the device memory to address the problem that GPU memory cannot be over-subscripted in a multitasking environment. Second, we present a fine-grained GPU kernel management scheme to avoid the GPU resource under-utilization problem in a i multitasking environment. We implement and evaluate our schemes on a real GPU system. The experimental results show that our proposed approaches can solve the problems related to GPGPU applications than the existing approaches while delivering better performance.최근 범용 GPU (GPGPU) 응용 프로그램은 고성능 컴퓨팅 (HPC) 및 딥 러닝 (DL)과 같은 다양한 연구 분야에서 핵심적인 역할을 수행하고 있다. 이러한 응 용 분야의 공통적인 특성은 거대한 계산 성능이 필요한 것이며 그래픽 처리 장치 (GPU)의 높은 병렬 처리 특성과 매우 적합하다. 그러나 GPU 시스템은 특정 유 형의 응용 프로그램에 최저화하는 대신 모든 응용 프로그램에 시스템 수준의 공정 성을 제공하도록 설계되어 있으며 각 GPGPU 응용 프로그램의 자원 사용 패턴이 다양하기 때문에 단일 응용 프로그램이 GPU 시스템의 리소스를 완전히 활용하여 GPU의 최고 성능을 달성 할 수는 없다. 따라서 GPU 멀티 태스킹은 다양한 리소스 사용 패턴을 가진 여러 응용 프로그 램을 함께 배치하여 GPU 리소스를 공유함으로써 GPU 자원 사용률 저하 문제를 해결할 수 있다. 그러나 기존 GPU 멀티 태스킹 기술은 자원 사용률 관점에서 응 용 프로그램의 효율적인 실행보다 공동으로 실행하는 데 중점을 둔다. 또한 현재 GPU 멀티 태스킹 기술은 오픈 소스가 아니므로 응용 프로그램과 GPU 시스템이 서로의 기능을 인식하지 못하기 때문에 최적화하기가 더 어려울 수도 있다. 본 논문에서는 응용 프로그램을 수정 없이 GPU 시스템과 GPGPU 응용 사 이의 프레임워크를 통해 사용하면 보다 높은 응용성능과 자원 사용을 보일 수 있음을 증명하고자 한다. 그러기 위해 GPU 태스크 관리 프레임워크를 개발하여 GPU 멀티 태스킹 환경에서 발생하는 두 가지 문제를 해결하였다. 첫째, 멀티 태 스킹 환경에서 GPU 메모리 초과 할당할 수 없는 문제를 해결하기 위해 호스트 메모리와 디바이스 메모리에 체크포인트 방식을 도입하였다. 둘째, 멀티 태스킹 환 경에서 GPU 자원 사용율 저하 문제를 해결하기 위해 더욱 세분화 된 GPU 커널 관리 시스템을 제시하였다. 본 논문에서는 제안한 방법들의 효과를 증명하기 위해 실제 GPU 시스템에 92 구현하고 그 성능을 평가하였다. 제안한 접근방식이 기존 접근 방식보다 GPGPU 응용 프로그램과 관련된 문제를 해결할 수 있으며 더 높은 성능을 제공할 수 있음을 확인할 수 있었다.Chapter 1 Introduction 1 1.1 Motivation 2 1.2 Contribution . 7 1.3 Outline 8 Chapter 2 Background 10 2.1 GraphicsProcessingUnit(GPU) and CUDA 10 2.2 CheckpointandRestart . 11 2.3 ResourceSharingModel. 11 2.4 CUDAContext 12 2.5 GPUThreadBlockScheduling . 13 2.6 Multi-ProcessServicewithHyper-Q 13 Chapter 3 Checkpoint based solution for GPU memory over- subscription problem 16 3.1 Motivation 16 3.2 RelatedWork. 18 3.3 DesignandImplementation . 20 3.3.1 System Design 21 3.3.2 CUDAAPIwrappingmodule 22 3.3.3 Scheduler . 28 3.4 Evaluation. 31 3.4.1 Evaluationsetup . 31 3.4.2 OverheadofFlexGPU 32 3.4.3 Performance with GPU Benchmark Suits 34 3.4.4 Performance with Real-world Workloads 36 3.4.5 Performance of workloads composed of multiple applications 39 3.5 Summary 42 Chapter 4 A Workload-aware Fine-grained Resource Manage- ment Framework for GPGPUs 43 4.1 Motivation 43 4.2 RelatedWork. 45 4.2.1 GPUresourcesharing 45 4.2.2 GPUscheduling . 46 4.3 DesignandImplementation . 47 4.3.1 SystemArchitecture . 47 4.3.2 CUDAAPIWrappingModule . 49 4.3.3 smCompactorRuntime . 50 4.3.4 ImplementationDetails . 57 4.4 Analysis on the relation between performance and workload usage pattern 60 4.4.1 WorkloadDefinition . 60 4.4.2 Analysisonperformancesaturation 60 4.4.3 Predict the necessary SMs and thread blocks for best performance . 64 4.5 Evaluation. 69 4.5.1 EvaluationMethodology. 70 4.5.2 OverheadofsmCompactor . 71 4.5.3 Performance with Different Thread Block Counts on Dif- ferentNumberofSMs 72 4.5.4 Performance with Concurrent Kernel and Resource Sharing 74 4.6 Summary . 79 Chapter 5 Conclusion. 81 요약. 92Docto

Energy-efficient checkpointing in high-throughput cycle-stealing distributed systems

Checkpointing is a fault-tolerance mechanism commonly used in High Throughput Computing (HTC) environments to allow the execution of long-running computational tasks on compute resources subject to hardware or software failures as well as interruptions from resource owners and more important tasks. Until recently many researchers have focused on the performance gains achieved through checkpointing, but now with growing scrutiny of the energy consumption of IT infrastructures it is increasingly important to understand the energy impact of checkpointing within an HTC environment. In this paper we demonstrate through trace-driven simulation of real-world datasets that existing checkpointing strategies are inadequate at maintaining an acceptable level of energy consumption whilst maintaing the performance gains expected with checkpointing. Furthermore, we identify factors important in deciding whether to exploit checkpointing within an HTC environment, and propose novel strategies to curtail the energy consumption of checkpointing approaches whist maintaining the performance benefits

Fail Over Strategy for Fault Tolerance in Cloud Computing Environment

YesCloud fault tolerance is an important issue in cloud computing platforms and applications. In the event of an unexpected system failure or malfunction, a robust fault-tolerant design may allow the cloud to continue functioning correctly possibly at a reduced level instead of failing completely. To ensure high availability of critical cloud services, the application execution and hardware performance, various fault tolerant techniques exist for building self-autonomous cloud systems. In comparison to current approaches, this paper proposes a more robust and reliable architecture using optimal checkpointing strategy to ensure high system availability and reduced system task service finish time. Using pass rates and virtualised mechanisms, the proposed Smart Failover Strategy (SFS) scheme uses components such as Cloud fault manager, Cloud controller, Cloud load balancer and a selection mechanism, providing fault tolerance via redundancy, optimized selection and checkpointing. In our approach, the Cloud fault manager repairs faults generated before the task time deadline is reached, blocking unrecoverable faulty nodes as well as their virtual nodes. This scheme is also able to remove temporary software faults from recoverable faulty nodes, thereby making them available for future request. We argue that the proposed SFS algorithm makes the system highly fault tolerant by considering forward and backward recovery using diverse software tools. Compared to existing approaches, preliminary experiment of the SFS algorithm indicate an increase in pass rates and a consequent decrease in failure rates, showing an overall good performance in task allocations. We present these results using experimental validation tools with comparison to other techniques, laying a foundation for a fully fault tolerant IaaS Cloud environment

Computing at massive scale: Scalability and dependability challenges

Large-scale Cloud systems and big data analytics frameworks are now widely used for practical services and applications. However, with the increase of data volume, together with the heterogeneity of workloads and resources, and the dynamic nature of massive user requests, the uncertainties and complexity of resource management and service provisioning increase dramatically, often resulting in poor resource utilization, vulnerable system dependability, and user-perceived performance degradations. In this paper we report our latest understanding of the current and future challenges in this particular area, and discuss both existing and potential solutions to the problems, especially those concerned with system efficiency, scalability and dependability. We first introduce a data-driven analysis methodology for characterizing the resource and workload patterns and tracing performance bottlenecks in a massive-scale distributed computing environment. We then examine and analyze several fundamental challenges and the solutions we are developing to tackle them, including for example incremental but decentralized resource scheduling, incremental messaging communication, rapid system failover, and request handling parallelism. We integrate these solutions with our data analysis methodology in order to establish an engineering approach that facilitates the optimization, tuning and verification of massive-scale distributed systems. We aim to develop and offer innovative methods and mechanisms for future computing platforms that will provide strong support for new big data and IoE (Internet of Everything) applications

DeSyRe: on-Demand System Reliability

The DeSyRe project builds on-demand adaptive and reliable Systems-on-Chips (SoCs). As fabrication technology scales down, chips are becoming less reliable, thereby incurring increased power and performance costs for fault tolerance. To make matters worse, power density is becoming a significant limiting factor in SoC design, in general. In the face of such changes in the technological landscape, current solutions for fault tolerance are expected to introduce excessive overheads in future systems. Moreover, attempting to design and manufacture a totally defect and fault-free system, would impact heavily, even prohibitively, the design, manufacturing, and testing costs, as well as the system performance and power consumption. In this context, DeSyRe delivers a new generation of systems that are reliable by design at well-balanced power, performance, and design costs. In our attempt to reduce the overheads of fault-tolerance, only a small fraction of the chip is built to be fault-free. This fault-free part is then employed to manage the remaining fault-prone resources of the SoC. The DeSyRe framework is applied to two medical systems with high safety requirements (measured using the IEC 61508 functional safety standard) and tight power and performance constraints

Failure Mitigation in Linear, Sesquilinear and Bijective Operations On Integer Data Streams Via Numerical Entanglement

A new roll-forward technique is proposed that recovers from any single fail-stop failure in $M$ integer data streams ($M\geq3$) when undergoing linear, sesquilinear or bijective (LSB) operations, such as: scaling, additions/subtractions, inner or outer vector products and permutations. In the proposed approach, the $M$ input integer data streams are linearly superimposed to form $M$ numerically entangled integer data streams that are stored in-place of the original inputs. A series of LSB operations can then be performed directly using these entangled data streams. The output results can be extracted from any $M-1$ entangled output streams by additions and arithmetic shifts, thereby guaranteeing robustness to a fail-stop failure in any single stream computation. Importantly, unlike other methods, the number of operations required for the entanglement, extraction and recovery of the results is linearly related to the number of the inputs and does not depend on the complexity of the performed LSB operations. We have validated our proposal in an Intel processor (Haswell architecture with AVX2 support) via convolution operations. Our analysis and experiments reveal that the proposed approach incurs only $1.8\%$ to $2.8\%$ reduction in processing throughput in comparison to the failure-intolerant approach. This overhead is 9 to 14 times smaller than that of the equivalent checksum-based method. Thus, our proposal can be used in distributed systems and unreliable processor hardware, or safety-critical applications, where robustness against fail-stop failures becomes a necessity.Comment: Proc. 21st IEEE International On-Line Testing Symposium (IOLTS 2015), July 2015, Halkidiki, Greec

Operating policies for energy efficient large scale computing

PhD ThesisEnergy costs now dominate IT infrastructure total cost of ownership, with datacentre operators predicted to spend more on energy than hardware infrastructure in the next five years. With Western European datacentre power consumption estimated at 56 TWh/year in 2007 and projected to double by 2020, improvements in energy efficiency of IT operations is imperative. The issue is further compounded by social and political factors and strict environmental legislation governing organisations. One such example of large IT systems includes high-throughput cycle stealing distributed systems such as HTCondor and BOINC, which allow organisations to leverage spare capacity on existing infrastructure to undertake valuable computation. As a consequence of increased scrutiny of the energy impact of these systems, aggressive power management policies are often employed to reduce the energy impact of institutional clusters, but in doing so these policies severely restrict the computational resources available for high-throughput systems. These policies are often configured to quickly transition servers and end-user cluster machines into low power states after only short idle periods, further compounding the issue of reliability. In this thesis, we evaluate operating policies for energy efficiency in large-scale computing environments by means of trace-driven discrete event simulation, leveraging real-world workload traces collected within Newcastle University. The major contributions of this thesis are as follows: i) Evaluation of novel energy efficient management policies for a decentralised peer-to-peer (P2P) BitTorrent environment. ii) Introduce a novel simulation environment for the evaluation of energy efficiency of large scale high-throughput computing systems, and propose a generalisable model of energy consumption in high-throughput computing systems. iii iii) Proposal and evaluation of resource allocation strategies for energy consumption in high-throughput computing systems for a real workload. iv) Proposal and evaluation for a realworkload ofmechanisms to reduce wasted task execution within high-throughput computing systems to reduce energy consumption. v) Evaluation of the impact of fault tolerance mechanisms on energy consumption