vSPARQL: A View Definition Language for the Semantic Web

Translational medicine applications would like to leverage the biological and biomedical ontologies, vocabularies, and data sets available on the semantic web. We present a general solution for RDF information set reuse inspired by database views. Our view definition language, vSPARQL, allows applications to specify the exact content that they are interested in and how that content should be restructured or modified. Applications can access relevant content by querying against these view definitions. We evaluate the expressivity of our approach by defining views for practical use cases and comparing our view definition language to existing query languages

Modeling views in the layered view model for XML using UML

In data engineering, view formalisms are used to provide flexibility to users and user applications by allowing them to extract and elaborate data from the stored data sources. Conversely, since the introduction of Extensible Markup Language (XML), it is fast emerging as the dominant standard for storing, describing, and interchanging data among various web and heterogeneous data sources. In combination with XML Schema, XML provides rich facilities for defining and constraining user-defined data semantics and properties, a feature that is unique to XML. In this context, it is interesting to investigate traditional database features, such as view models and view design techniques for XML. However, traditional view formalisms are strongly coupled to the data language and its syntax, thus it proves to be a difficult task to support views in the case of semi-structured data models. Therefore, in this paper we propose a Layered View Model (LVM) for XML with conceptual and schemata extensions. Here our work is three-fold; first we propose an approach to separate the implementation and conceptual aspects of the views that provides a clear separation of concerns, thus, allowing analysis and design of views to be separated from their implementation. Secondly, we define representations to express and construct these views at the conceptual level. Thirdly, we define a view transformation methodology for XML views in the LVM, which carries out automated transformation to a view schema and a view query expression in an appropriate query language. Also, to validate and apply the LVM concepts, methods and transformations developed, we propose a view-driven application development framework with the flexibility to develop web and database applications for XML, at varying levels of abstraction

A Query Integrator and Manager for the Query Web

We introduce two concepts: the Query Web as a layer of interconnected queries over the document web and the semantic web, and a Query Web Integrator and Manager (QI) that enables the Query Web to evolve. QI permits users to write, save and reuse queries over any web accessible source, including other queries saved in other installations of QI. The saved queries may be in any language (e.g. SPARQL, XQuery); the only condition for interconnection is that the queries return their results in some form of XML. This condition allows queries to chain off each other, and to be written in whatever language is appropriate for the task. We illustrate the potential use of QI for several biomedical use cases, including ontology view generation using a combination of graph-based and logical approaches, value set generation for clinical data management, image annotation using terminology obtained from an ontology web service, ontology-driven brain imaging data integration, small-scale clinical data integration, and wider-scale clinical data integration. Such use cases illustrate the current range of applications of QI and lead us to speculate about the potential evolution from smaller groups of interconnected queries into a larger query network that layers over the document and semantic web. The resulting Query Web could greatly aid researchers and others who now have to manually navigate through multiple information sources in order to answer specific questions

Modeling ontology views: An abstract view model for semantic web

The emergence of Semantic Web (SW) and the related technologies promise to make the web a meaningful experience. However, high level modelling, design and querying techniques proves to be a challenging task for organizations that are hoping to utilize the SW paradigm for their industrial applications. To address one such issue, in this paper, we propose an abstract view model with conceptual extensions for the SW. First we outline the view model, its properties and some modelling issues with the help of an industrial case study example. Then, we provide some discussions on constructing such views (at the conceptual level) using a set of operators. Later we provide a brief discussion on how such this view model can utilized in the MOVE [1] system, to design and construct materialized Ontology views to support Ontology extraction

Engineering XML solutions using views

In industrial informatics, engineering data intensive Enterprise Information Systems (EIS) is a challenging task without abstraction and partitioning. Further, the introduction of semi-structured data (namely XML) and its rapid adaptation by the commercial and industrial systems increased the complexity for data engineering. Conversely, the introduction of OMG's MDA presents an interesting paradigm for EIS and system modelling, where a system is designed at a higher level of abstraction. This presents an interesting problem to investigate data engineering XML solutions under the MDA initiatives, where, models and framework requires higher level of abstraction. In this paper we investigate a view model that can provide layered design methodology for modelling data intensive XML solutions for EIS paradigm, with sufficient level of abstraction

Publishing and Consuming Semantic Views for Construction of Knowledge Graphs

The main goal of semantic integration is to provide a virtual semantic view that is semantically connected to data so that applications can have integrated access to data sources through the virtual Knowledge Graph. A semantic view can be published on a semantic portal to make it reusable for building Knowledge Graphs for different applications. This paper takes the first step towards publishing a semantic view on a semantic portal. This paper has three main contributions. First, we introduce a vocabulary for specifying semantic views. Then, we introduce a vocabulary for specification and quality assessment of Knowledge Graph. Third, we describe an approach to automatize the construction of a high-quality Knowledge Graph reusing a semantic view