An Extensible "SCHEMA-LESS" Database Framework for Managing High-Throughput Semi-Structured Documents

Object-Relational database management system is an integrated hybrid cooperative approach to combine the best practices of both the relational model utilizing SQL queries and the object-oriented, semantic paradigm for supporting complex data creation. In this paper, a highly scalable, information on demand database framework, called NETMARK, is introduced. NETMARK takes advantages of the Oracle 8i object-relational database using physical addresses data types for very efficient keyword search of records spanning across both context and content. NETMARK was originally developed in early 2000 as a research and development prototype to solve the vast amounts of unstructured and semistructured documents existing within NASA enterprises. Today, NETMARK is a flexible, high-throughput open database framework for managing, storing, and searching unstructured or semi-structured arbitrary hierarchal models, such as XML and HTML

XML documents clustering using a tensor space model

The traditional Vector Space Model (VSM) is not able to represent both the structure and the content of XML documents. This paper introduces a novel method of representing XML documents in a Tensor Space Model (TSM) and then utilizing it for clustering. Empirical analysis shows that the proposed method is scalable for large-sized datasets; as well, the factorized matrices produced from the proposed method help to improve the quality of clusters through the enriched document representation of both structure and content information

TREE-D-SEEK: A Framework for Retrieving Three-Dimensional Scenes

In this dissertation, a strategy and framework for retrieving 3D scenes is proposed. The strategy is to retrieve 3D scenes based on a unified approach for indexing content from disparate information sources and information levels. The TREE-D-SEEK framework implements the proposed strategy for retrieving 3D scenes and is capable of indexing content from a variety of corpora at distinct information levels. A semantic annotation model for indexing 3D scenes in the TREE-D-SEEK framework is also proposed. The semantic annotation model is based on an ontology for rapid prototyping of 3D virtual worlds. With ongoing improvements in computer hardware and 3D technology, the cost associated with the acquisition, production and deployment of 3D scenes is decreasing. As a consequence, there is a need for efficient 3D retrieval systems for the increasing number of 3D scenes in corpora. An efficient 3D retrieval system provides several benefits such as enhanced sharing and reuse of 3D scenes and 3D content. Existing 3D retrieval systems are closed systems and provide search solutions based on a predefined set of indexing and matching algorithms Existing 3D search systems and search solutions cannot be customized for specific requirements, type of information source and information level. In this research, TREE-D-SEEK—an open, extensible framework for retrieving 3D scenes—is proposed. The TREE-D-SEEK framework is capable of retrieving 3D scenes based on indexing low level content to high-level semantic metadata. The TREE-D-SEEK framework is discussed from a software architecture perspective. The architecture is based on a common process flow derived from indexing disparate information sources. Several indexing and matching algorithms are implemented. Experiments are conducted to evaluate the usability and performance of the framework. Retrieval performance of the framework is evaluated using benchmarks and manually collected corpora. A generic, semantic annotation model is proposed for indexing a 3D scene. The primary objective of using the semantic annotation model in the TREE-D-SEEK framework is to improve retrieval relevance and to support richer queries within a 3D scene. The semantic annotation model is driven by an ontology. The ontology is derived from a 3D rapid prototyping framework. The TREE-D-SEEK framework supports querying by example, keyword based and semantic annotation based query types for retrieving 3D scenes

Managing XML Data to optimize Performance into Object-Relational Databases

This paper propose some possibilities for manage XML data in order to optimize performance into object-relational databases. It is detailed the possibility of storing XML data into such databases, using for exemplification an Oracle database and there are tested some optimizing techniques of the queries over XMLType tables, like indexing and partitioning tables

Archiving scientific data

We present an archiving technique for hierarchical data with key structure. Our approach is based on the notion of timestamps whereby an element appearing in multiple versions of the database is stored only once along with a compact description of versions in which it appears. The basic idea of timestamping was discovered by Driscoll et. al. in the context of persistent data structures where one wishes to track the sequences of changes made to a data structure. We extend this idea to develop an archiving tool for XML data that is capable of providing meaningful change descriptions and can also efficiently support a variety of basic functions concerning the evolution of data such as retrieval of any specific version from the archive and querying the temporal history of any element. This is in contrast to diff-based approaches where such operations may require undoing a large number of changes or significant reasoning with the deltas. Surprisingly, our archiving technique does not incur any significant space overhead when contrasted with other approaches. Our experimental results support this and also show that the compacted archive file interacts well with other compression techniques. Finally, another useful property of our approach is that the resulting archive is also in XML and hence can directly leverage existing XML tools

The Forgotten Document-Oriented Database Management Systems: An Overview and Benchmark of Native XML DODBMSes in Comparison with JSON DODBMSes

In the current context of Big Data, a multitude of new NoSQL solutions for storing, managing, and extracting information and patterns from semi-structured data have been proposed and implemented. These solutions were developed to relieve the issue of rigid data structures present in relational databases, by introducing semi-structured and flexible schema design. As current data generated by different sources and devices, especially from IoT sensors and actuators, use either XML or JSON format, depending on the application, database technologies that store and query semi-structured data in XML format are needed. Thus, Native XML Databases, which were initially designed to manipulate XML data using standardized querying languages, i.e., XQuery and XPath, were rebranded as NoSQL Document-Oriented Databases Systems. Currently, the majority of these solutions have been replaced with the more modern JSON based Database Management Systems. However, we believe that XML-based solutions can still deliver performance in executing complex queries on heterogeneous collections. Unfortunately nowadays, research lacks a clear comparison of the scalability and performance for database technologies that store and query documents in XML versus the more modern JSON format. Moreover, to the best of our knowledge, there are no Big Data-compliant benchmarks for such database technologies. In this paper, we present a comparison for selected Document-Oriented Database Systems that either use the XML format to encode documents, i.e., BaseX, eXist-db, and Sedna, or the JSON format, i.e., MongoDB, CouchDB, and Couchbase. To underline the performance differences we also propose a benchmark that uses a heterogeneous complex schema on a large DBLP corpus.Comment: 28 pages, 6 figures, 7 table

Content-Aware DataGuides for Indexing Large Collections of XML Documents

XML is well-suited for modelling structured data with textual content. However, most indexing approaches perform structure and content matching independently, combining the retrieved path and keyword occurrences in a third step. This paper shows that retrieval in XML documents can be accelerated significantly by processing text and structure simultaneously during all retrieval phases. To this end, the Content-Aware DataGuide (CADG) enhances the wellknown DataGuide with (1) simultaneous keyword and path matching and (2) a precomputed content/structure join. Extensive experiments prove the CADG to be 50-90% faster than the DataGuide for various sorts of query and document, including difficult cases such as poorly structured queries and recursive document paths. A new query classification scheme identifies precise query characteristics with a predominant influence on the performance of the individual indices. The experiments show that the CADG is applicable to many real-world applications, in particular large collections of heterogeneously structured XML documents

Structure and content semantic similarity detection of eXtensible markup language documents using keys

XML (eXtensible Mark-up Language) has become the fundamental standard for efficient data management and exchange. Due to the widespread use of XML for describing and exchanging data on the web, XML-based comparison is central issues in database management and information retrieval. In fact, although many heterogeneous XML sources have similar content, they may be described using different tag names and structures. This work proposes a series of algorithms for detection of structural and content changes among XML data. The first is an algorithm called XDoI (XML Data Integration Based on Content and Structure Similarity Using Keys) that clusters XML documents into subtrees using leaf-node parents as clustering points. This algorithm matches subtrees using the key concept and compares unmatched subtrees for similarities in both content and structure. The experimental results show that this approach finds much more accurate matches with or without the presence of keys in the subtrees. A second algorithm proposed here is called XDI-CSSK (a system for detecting xml similarity in content and structure using relational database); it eliminates unnecessary clustering points using instance statistics and a taxonomic analyzer. As the number of subtrees to be compared is reduced, the overall execution time is reduced dramatically. Semantic similarity plays a crucial role in precise computational similarity measures. A third algorithm, called XML-SIM (structure and content semantic similarity detection using keys) is based on previous work to detect XML semantic similarity based on structure and content. This algorithm is an improvement over XDI-CSSK and XDoI in that it determines content similarity based on semantic structural similarity. In an experimental evaluation, it outperformed previous approaches in terms of both execution time and false positive rates. Information changes periodically; therefore, it is important to be able to detect changes among different versions of an XML document and use that information to identify semantic similarities. Finally, this work introduces an approach to detect XML similarity and thus to join XML document versions using a change detection mechanism. In this approach, subtree keys still play an important role in order to avoid unnecessary subtree comparisons within multiple versions of the same document. Real data sets from bibliographic domains demonstrate the effectiveness of all these algorithms --Abstract, page iv-v