Toward a General-Purpose Heterogeneous Ensemble for Pattern Classification

We perform an extensive study of the performance of different classification approaches on twenty-five datasets (fourteen image datasets and eleven UCI data mining datasets). The aim is to find General-Purpose (GP) heterogeneous ensembles (requiring little to no parameter tuning) that perform competitively across multiple datasets. The state-of-the-art classifiers examined in this study include the support vector machine, Gaussian process classifiers, random subspace of adaboost, random subspace of rotation boosting, and deep learning classifiers. We demonstrate that a heterogeneous ensemble based on the simple fusion by sum rule of different classifiers performs consistently well across all twenty-five datasets. The most important result of our investigation is demonstrating that some very recent approaches, including the heterogeneous ensemble we propose in this paper, are capable of outperforming an SVM classifier (implemented with LibSVM), even when both kernel selection and SVM parameters are carefully tuned for each dataset

"Tree Thinking": The Rhetoric of Tree Diagrams in Biological Thought

Tree-like visualizations have played a central role in taxonomic and evolutionary biology for centuries, and the idea of a “tree of life” has been a pervasive notion not only in biology but also in religion, philosophy, and literature for much longer. The tree of life is a central figure in Darwin’s Origin of Species in both verbal and visual forms. As one of the most powerful and pervasive images in biological thought, what conceptual and communicative work has it enabled? How have the visual qualities and elements of the tree form interacted with biological thinking over time? This paper examines the pre-Darwinian history of tree images, the significance of Darwin’s use of such images, and the development of tree diagrams after Darwin. This history shows evidence of four separate traditions of visualization: cosmological, logical-philosophical, genealogical, and materialist. Visual traditions serve as rhetorical contexts that provide enthymematic backing, or what Perelman calls “objects of agreement,” for interpretation of tree diagrams. They produce polysemic warrants for arguments in different fields. The combination of the genealogical tradition with the cosmological and the logical changed the framework for thinking about the natural world and made Darwin’s theory of evolution possible; the later materialist tradition represents the “modernization” of biology as a science

On the Utility of Representation Learning Algorithms for Myoelectric Interfacing

Electrical activity produced by muscles during voluntary movement is a reflection of the firing patterns of relevant motor neurons and, by extension, the latent motor intent driving the movement. Once transduced via electromyography (EMG) and converted into digital form, this activity can be processed to provide an estimate of the original motor intent and is as such a feasible basis for non-invasive efferent neural interfacing. EMG-based motor intent decoding has so far received the most attention in the field of upper-limb prosthetics, where alternative means of interfacing are scarce and the utility of better control apparent. Whereas myoelectric prostheses have been available since the 1960s, available EMG control interfaces still lag behind the mechanical capabilities of the artificial limbs they are intended to steer—a gap at least partially due to limitations in current methods for translating EMG into appropriate motion commands. As the relationship between EMG signals and concurrent effector kinematics is highly non-linear and apparently stochastic, finding ways to accurately extract and combine relevant information from across electrode sites is still an active area of inquiry.This dissertation comprises an introduction and eight papers that explore issues afflicting the status quo of myoelectric decoding and possible solutions, all related through their use of learning algorithms and deep Artificial Neural Network (ANN) models. Paper I presents a Convolutional Neural Network (CNN) for multi-label movement decoding of high-density surface EMG (HD-sEMG) signals. Inspired by the successful use of CNNs in Paper I and the work of others, Paper II presents a method for automatic design of CNN architectures for use in myocontrol. Paper III introduces an ANN architecture with an appertaining training framework from which simultaneous and proportional control emerges. Paper Iv introduce a dataset of HD-sEMG signals for use with learning algorithms. Paper v applies a Recurrent Neural Network (RNN) model to decode finger forces from intramuscular EMG. Paper vI introduces a Transformer model for myoelectric interfacing that do not need additional training data to function with previously unseen users. Paper vII compares the performance of a Long Short-Term Memory (LSTM) network to that of classical pattern recognition algorithms. Lastly, paper vIII describes a framework for synthesizing EMG from multi-articulate gestures intended to reduce training burden

An archaeology of Iron Age domestic settlement in northern Scotland

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