Enhancing Automated Decision Support across Medical and Oral Health Domains with Semantic Web Technologies

Research has shown that the general health and oral health of an individual are closely related. Accordingly, current practice of isolating the information base of medical and oral health domains can be dangerous and detrimental to the health of the individual. However, technical issues such as heterogeneous data collection and storage formats, limited sharing of patient information and lack of decision support over the shared information are the principal reasons for the current state of affairs. To address these issues, the following research investigates the development and application of a cross-domain ontology and rules to build an evidence-based and reusable knowledge base consisting of the inter-dependent conditions from the two domains. Through example implementation of the knowledge base in Protege, we demonstrate the effectiveness of our approach in reasoning over and providing decision support for cross-domain patient information.Comment: The paper has been published at the 24th Australasian Conference on Information Systems, 4-6 Dec 2013, Melbourne. The paper can be found at: http://mo.bf.rmit.edu.au/acis2013/382.pd

The Vadalog System: Datalog-based Reasoning for Knowledge Graphs

Over the past years, there has been a resurgence of Datalog-based systems in the database community as well as in industry. In this context, it has been recognized that to handle the complex knowl\-edge-based scenarios encountered today, such as reasoning over large knowledge graphs, Datalog has to be extended with features such as existential quantification. Yet, Datalog-based reasoning in the presence of existential quantification is in general undecidable. Many efforts have been made to define decidable fragments. Warded Datalog+/- is a very promising one, as it captures PTIME complexity while allowing ontological reasoning. Yet so far, no implementation of Warded Datalog+/- was available. In this paper we present the Vadalog system, a Datalog-based system for performing complex logic reasoning tasks, such as those required in advanced knowledge graphs. The Vadalog system is Oxford's contribution to the VADA research programme, a joint effort of the universities of Oxford, Manchester and Edinburgh and around 20 industrial partners. As the main contribution of this paper, we illustrate the first implementation of Warded Datalog+/-, a high-performance Datalog+/- system utilizing an aggressive termination control strategy. We also provide a comprehensive experimental evaluation.Comment: Extended version of VLDB paper <https://doi.org/10.14778/3213880.3213888

Ontology-based knowledge representation and semantic search information retrieval: case study of the underutilized crops domain

The aim of using semantic technologies in domain knowledge modeling is to introduce the semantic meaning of concepts in knowledge bases, such that they are both human-readable as well as machine-understandable. Due to their powerful knowledge representation formalism and associated inference mechanisms, ontology-based approaches have been increasingly adopted to formally represent domain knowledge. The primary objective of this thesis work has been to use semantic technologies in advancing knowledge-sharing of Underutilized crops as a domain and investigate the integration of underlying ontologies developed in OWL (Web Ontology Language) with augmented SWRL (Semantic Web Rule Language) rules for added expressiveness. The work further investigated generating ontologies from existing data sources and proposed the reverse-engineering approach of generating domain specific conceptualization through competency questions posed from possible ontology users and domain experts. For utilization, a semantic search engine (the Onto-CropBase) has been developed to serve as a Web-based access point for the Underutilized crops ontology model. Relevant linked-data in Resource Description Framework Schema (RDFS) were added for comprehensiveness in generating federated queries. While the OWL/SWRL combination offers a highly expressive ontology language for modeling knowledge domains, the combination is found to be lacking supplementary descriptive constructs to model complex real-life scenarios, a necessary requirement for a successful Semantic Web application. To this end, the common logic programming formalisms for extending Description Logic (DL)-based ontologies were explored and the state of the art in SWRL expressiveness extensions determined with a view to extending the SWRL formalism. Subsequently, a novel fuzzy temporal extension to the Semantic Web Rule Language (FT-SWRL), which combines SWRL with fuzzy logic theories based on the valid-time temporal model, has been proposed to allow modeling imprecise temporal expressions in domain ontologies

A review and comparison of ontology-based approaches to robot autonomy

Within the next decades, robots will need to be able to execute a large variety of tasks autonomously in a large variety of environments. To relax the resulting programming effort, a knowledge-enabled approach to robot programming can be adopted to organize information in re-usable knowledge pieces. However, for the ease of reuse, there needs to be an agreement on the meaning of terms. A common approach is to represent these terms using ontology languages that conceptualize the respective domain. In this work, we will review projects that use ontologies to support robot autonomy. We will systematically search for projects that fulfill a set of inclusion criteria and compare them with each other with respect to the scope of their ontology, what types of cognitive capabilities are supported by the use of ontologies, and which is their application domain.Peer ReviewedPostprint (author's final draft

Approximate Assertional Reasoning Over Expressive Ontologies

In this thesis, approximate reasoning methods for scalable assertional reasoning are provided whose computational properties can be established in a well-understood way, namely in terms of soundness and completeness, and whose quality can be analyzed in terms of statistical measurements, namely recall and precision. The basic idea of these approximate reasoning methods is to speed up reasoning by trading off the quality of reasoning results against increased speed

Optimization and inference under fuzzy numerical constraints

Εκτεταμένη έρευνα έχει γίνει στους τομείς της Ικανοποίησης Περιορισμών με διακριτά (ακέραια) ή πραγματικά πεδία τιμών. Αυτή η έρευνα έχει οδηγήσει σε πολλαπλές σημασιολογικές περιγραφές, πλατφόρμες και συστήματα για την περιγραφή σχετικών προβλημάτων με επαρκείς βελτιστοποιήσεις. Παρά ταύτα, λόγω της ασαφούς φύσης πραγματικών προβλημάτων ή ελλιπούς μας γνώσης για αυτά, η σαφής μοντελοποίηση ενός προβλήματος ικανοποίησης περιορισμών δεν είναι πάντα ένα εύκολο ζήτημα ή ακόμα και η καλύτερη προσέγγιση. Επιπλέον, το πρόβλημα της μοντελοποίησης και επίλυσης ελλιπούς γνώσης είναι ακόμη δυσκολότερο. Επιπροσθέτως, πρακτικές απαιτήσεις μοντελοποίησης και μέθοδοι βελτιστοποίησης του χρόνου αναζήτησης απαιτούν συνήθως ειδικές πληροφορίες για το πεδίο εφαρμογής, καθιστώντας τη δημιουργία ενός γενικότερου πλαισίου βελτιστοποίησης ένα ιδιαίτερα δύσκολο πρόβλημα. Στα πλαίσια αυτής της εργασίας θα μελετήσουμε το πρόβλημα της μοντελοποίησης και αξιοποίησης σαφών, ελλιπών ή ασαφών περιορισμών, καθώς και πιθανές στρατηγικές βελτιστοποίησης. Καθώς τα παραδοσιακά προβλήματα ικανοποίησης περιορισμών λειτουργούν βάσει συγκεκριμένων και προκαθορισμένων κανόνων και σχέσεων, παρουσιάζει ενδιαφέρον η διερεύνηση στρατηγικών και βελτιστοποιήσεων που θα επιτρέπουν το συμπερασμό νέων ή/και αποδοτικότερων περιορισμών. Τέτοιοι επιπρόσθετοι κανόνες θα μπορούσαν να βελτιώσουν τη διαδικασία αναζήτησης μέσω της εφαρμογής αυστηρότερων περιορισμών και περιορισμού του χώρου αναζήτησης ή να προσφέρουν χρήσιμες πληροφορίες στον αναλυτή για τη φύση του προβλήματος που μοντελοποιεί.Extensive research has been done in the areas of Constraint Satisfaction with discrete/integer and real domain ranges. Multiple platforms and systems to deal with these kinds of domains have been developed and appropriately optimized. Nevertheless, due to the incomplete and possibly vague nature of real-life problems, modeling a crisp and adequately strict satisfaction problem may not always be easy or even appropriate. The problem of modeling incomplete knowledge or solving an incomplete/relaxed representation of a problem is a much harder issue to tackle. Additionally, practical modeling requirements and search optimizations require specific domain knowledge in order to be implemented, making the creation of a more generic optimization framework an even harder problem.In this thesis, we will study the problem of modeling and utilizing incomplete and fuzzy constraints, as well as possible optimization strategies. As constraint satisfaction problems usually contain hard-coded constraints based on specific problem and domain knowledge, we will investigate whether strategies and generic heuristics exist for inferring new constraint rules. Additional rules could optimize the search process by implementing stricter constraints and thus pruning the search space or even provide useful insight to the researcher concerning the nature of the investigated problem

Automata for infinite argumentation structures

The theory of abstract argumentation frameworks (afs) has, in the main, focused on finite structures, though there are many significant contexts where argumentation can be regarded as a process involving infinite objects. To address this limitation, in this paper we propose a novel approach for describing infinite afs using tools from formal language theory. In particular, the possibly infinite set of arguments is specified through the language recognized by a deterministic finite automaton while a suitable formalism, called attack expression, is introduced to describe the relation of attack between arguments. The proposed approach is shown to satisfy some desirable properties which cannot be achieved through other “naive” uses of formal languages. In particular, the approach is shown to be expressive enough to capture (besides any arbitrary finite structure) a large variety of infinite afs including two major examples from previous literature and two sample cases from the domains of multi-agent negotiation and ambient intelligence. On the computational side, we show that several decision and construction problems which are known to be polynomial time solvable in finite afs are decidable in the context of the proposed formalism and we provide the relevant algorithms. Moreover we obtain additional results concerning the case of finitaryafs

Coordinating Resource Use in Open Distributed Systems

In an open distributed system, computational resources are peer-owned, and distributed over time and space. The system is open to interactions with its environment, and the resources can dynamically join or leave the system, or can be discovered at runtime. This dynamicity leads to opportunities to carry out computations without statically owned resources, harnessing the collective compute power of the resources connected by the Internet. However, realizing this potential requires efficient and scalable resource discovery, coordination, and control, which present challenges in a dynamic, open environment. In this thesis, I present an approach to address these challenges by separating the functionality concerns of concurrent computations from those of coordinating their resource use, with the purpose of reducing programming complexity, and aiding development of correct, efficient, and resource-aware concurrent programs. As a first step towards effectively coordinating distributed resources, I developed DREAM, a Distributed Resource Estimation and Allocation Model, which enables computations to reason about future availability of resources. I then developed a fine-grained resource coordination scheme for distributed computations. The coordination scheme integrates DREAM-based resource reasoning into a distributed scheduler, for deciding and enforcing fine-grained resource-use schedules for distributed computations. To control the overhead caused by the coordination, a tuner is implemented which explicitly balances the overhead of the control mechanisms against the extent of control exercised. The effectiveness and performance of the resource coordination approach have been evaluated using a number of case studies. Experimental results show that the approach can effectively schedule computations for supporting various types of coordination objectives, such as ensuring Quality-of-Service, power-efficient execution, and dynamic load balancing. The overhead caused by the coordination mechanism is relatively modest, and adjustable through the tuner. In addition, the coordination mechanism does not add extra programming complexity to computations