Development of a R package to facilitate the learning of clustering techniques

This project explores the development of a tool, in the form of a R package, to ease the process of learning clustering techniques, how they work and what their pros and cons are. This tool should provide implementations for several different clustering techniques with explanations in order to allow the student to get familiar with the characteristics of each algorithm by testing them against several different datasets while deepening their understanding of them through the explanations. Additionally, these explanations should adapt to the input data, making the tool not only adept for self-regulated learning but for teaching too.Grado en Ingeniería Informátic

Segmentação, seguimento e avaliação automática de bactérias em imagens de microscópio

Dissertação para obtenção do Grau de Mestre em Engenharia BiomédicaAo longo de várias décadas, os diversos trabalhos realizados no campo da microscopia caracterizaram-se por um vasto conjunto de procedimentos de análise em imagens microscópicas. A quantificação celular das imagens em estudo é normalmente um procedimento lento, podendo apresentar uma percentagem de erro significativa, devido essencialmente à elevada quantidade de observações a serem efetuadas. Neste sentido, o desenvolvimento de algoritmos de processamento de imagem e de sistemas de reconhecimento, permite a criação de processos de quantificação automática de muitas das imagens microscópicas em estudo. A dissertação de mestrado aqui apresentada descreve e avalia o desenvolvimento de um algoritmo que tem como objetivo efetuar a segmentação e avaliação de um conjunto de imagens microscópicas. O protótipo projetado constitui um sistema de contabilização automática do número de bactérias E.coli visualizado em cada uma das imagens consideradas. As imagens foram disponibilizadas pelo Laboratory of Biosystem Dynamics da Tampere University of Technology tendo sido adquiridas através de microscópios confocais. O algoritmo desenvolvido pode dividir-se em três passos distintos. Inicialmente é aplicado um pré-processamento sobre as imagens em estudo constituído por um conjunto de transformações que retiram alguma da informação desnecessária da imagem e ao mesmo tempo melhoram os contornos dos segmentos constituintes. Seguidamente é implementado um processo de Template matching, que efetua a detecção da localização de cada uma das bactérias. Neste passo, as bactérias são povoadas individualmente por um conjunto de marcas que são posteriormente utilizadas no terceiro e último passo. Neste último passo é aplicada uma técnica de segmentação baseada no método Watershed, um dos mais estudados métodos de segmentação, inseridos na área do processamento de imagem. O protótipo foi testado nas imagens disponibilizadas, tendo obtido um grau de eficiência bastante satisfatório. De forma a avaliar a versatilidade do software desenvolvido, este foi também aplicado a imagens fornecidas por um dos mais eficientes softwares existentes no mercado e os seus resultados comparados

Collected Papers (on Neutrosophics, Plithogenics, Hypersoft Set, Hypergraphs, and other topics), Volume X

This tenth volume of Collected Papers includes 86 papers in English and Spanish languages comprising 972 pages, written between 2014-2022 by the author alone or in collaboration with the following 105 co-authors (alphabetically ordered) from 26 countries: Abu Sufian, Ali Hassan, Ali Safaa Sadiq, Anirudha Ghosh, Assia Bakali, Atiqe Ur Rahman, Laura Bogdan, Willem K.M. Brauers, Erick González Caballero, Fausto Cavallaro, Gavrilă Calefariu, T. Chalapathi, Victor Christianto, Mihaela Colhon, Sergiu Boris Cononovici, Mamoni Dhar, Irfan Deli, Rebeca Escobar-Jara, Alexandru Gal, N. Gandotra, Sudipta Gayen, Vassilis C. Gerogiannis, Noel Batista Hernández, Hongnian Yu, Hongbo Wang, Mihaiela Iliescu, F. Nirmala Irudayam, Sripati Jha, Darjan Karabašević, T. Katican, Bakhtawar Ali Khan, Hina Khan, Volodymyr Krasnoholovets, R. Kiran Kumar, Manoranjan Kumar Singh, Ranjan Kumar, M. Lathamaheswari, Yasar Mahmood, Nivetha Martin, Adrian Mărgean, Octavian Melinte, Mingcong Deng, Marcel Migdalovici, Monika Moga, Sana Moin, Mohamed Abdel-Basset, Mohamed Elhoseny, Rehab Mohamed, Mohamed Talea, Kalyan Mondal, Muhammad Aslam, Muhammad Aslam Malik, Muhammad Ihsan, Muhammad Naveed Jafar, Muhammad Rayees Ahmad, Muhammad Saeed, Muhammad Saqlain, Muhammad Shabir, Mujahid Abbas, Mumtaz Ali, Radu I. Munteanu, Ghulam Murtaza, Munazza Naz, Tahsin Oner, ‪Gabrijela Popović‬‬‬‬‬, Surapati Pramanik, R. Priya, S.P. Priyadharshini, Midha Qayyum, Quang-Thinh Bui, Shazia Rana, Akbara Rezaei, Jesús Estupiñán Ricardo, Rıdvan Sahin, Saeeda Mirvakili, Said Broumi, A. A. Salama, Flavius Aurelian Sârbu, Ganeshsree Selvachandran, Javid Shabbir, Shio Gai Quek, Son Hoang Le, Florentin Smarandache, Dragiša Stanujkić, S. Sudha, Taha Yasin Ozturk, Zaigham Tahir, The Houw Iong, Ayse Topal, Alptekin Ulutaș, Maikel Yelandi Leyva Vázquez, Rizha Vitania, Luige Vlădăreanu, Victor Vlădăreanu, Ștefan Vlăduțescu, J. Vimala, Dan Valeriu Voinea, Adem Yolcu, Yongfei Feng, Abd El-Nasser H. Zaied, Edmundas Kazimieras Zavadskas.‬

Data-driven method for enhanced corrosion assessment of reinforced concrete structures

Corrosion is a major problem affecting the durability of reinforced concrete structures. Corrosion related maintenance and repair of reinforced concrete structures cost multibillion USD per annum globally. It is often triggered by the ingression of carbon dioxide and/or chloride into the pores of concrete. Estimation of these corrosion causing factors using the conventional models results in suboptimal assessment since they are incapable of capturing the complex interaction of parameters. Hygrothermal interaction also plays a role in aggravating the corrosion of reinforcement bar and this is usually counteracted by applying surface protection systems. These systems have different degree of protection and they may even cause deterioration to the structure unintentionally. The overall objective of this dissertation is to provide a framework that enhances the assessment reliability of the corrosion controlling factors. The framework is realized through the development of data-driven carbonation depth, chloride profile and hygrothermal performance prediction models. The carbonation depth prediction model integrates neural network, decision tree, boosted and bagged ensemble decision trees. The ensemble tree based chloride profile prediction models evaluate the significance of chloride ingress controlling variables from various perspectives. The hygrothermal interaction prediction models are developed using neural networks to evaluate the status of corrosion and other unexpected deteriorations in surface-treated concrete elements. Long-term data for all models were obtained from three different field experiments. The performance comparison of the developed carbonation depth prediction model with the conventional one confirmed the prediction superiority of the data-driven model. The variable importance measure revealed that plasticizers and air contents are among the top six carbonation governing parameters out of 25. The discovered topmost chloride penetration controlling parameters representing the composition of the concrete are aggregate size distribution, amount and type of plasticizers and supplementary cementitious materials. The performance analysis of the developed hygrothermal model revealed its prediction capability with low error. The integrated exploratory data analysis technique with the hygrothermal model had identified the surfaceprotection systems that are able to protect from corrosion, chemical and frost attacks. All the developed corrosion assessment models are valid, reliable, robust and easily reproducible, which assist to define proactive maintenance plan. In addition, the determined influential parameters could help companies to produce optimized concrete mix that is able to resist carbonation and chloride penetration. Hence, the outcomes of this dissertation enable reduction of lifecycle costs

Measuring the impact of COVID-19 on hospital care pathways

Care pathways in hospitals around the world reported significant disruption during the recent COVID-19 pandemic but measuring the actual impact is more problematic. Process mining can be useful for hospital management to measure the conformance of real-life care to what might be considered normal operations. In this study, we aim to demonstrate that process mining can be used to investigate process changes associated with complex disruptive events. We studied perturbations to accident and emergency (A &E) and maternity pathways in a UK public hospital during the COVID-19 pandemic. Co-incidentally the hospital had implemented a Command Centre approach for patient-flow management affording an opportunity to study both the planned improvement and the disruption due to the pandemic. Our study proposes and demonstrates a method for measuring and investigating the impact of such planned and unplanned disruptions affecting hospital care pathways. We found that during the pandemic, both A &E and maternity pathways had measurable reductions in the mean length of stay and a measurable drop in the percentage of pathways conforming to normative models. There were no distinctive patterns of monthly mean values of length of stay nor conformance throughout the phases of the installation of the hospital’s new Command Centre approach. Due to a deficit in the available A &E data, the findings for A &E pathways could not be interpreted

Research Paper: Process Mining and Synthetic Health Data: Reflections and Lessons Learnt

Analysing the treatment pathways in real-world health data can provide valuable insight for clinicians and decision-makers. However, the procedures for acquiring real-world data for research can be restrictive, time-consuming and risks disclosing identifiable information. Synthetic data might enable representative analysis without direct access to sensitive data. In the first part of our paper, we propose an approach for grading synthetic data for process analysis based on its fidelity to relationships found in real-world data. In the second part, we apply our grading approach by assessing cancer patient pathways in a synthetic healthcare dataset (The Simulacrum provided by the English National Cancer Registration and Analysis Service) using process mining. Visualisations of the patient pathways within the synthetic data appear plausible, showing relationships between events confirmed in the underlying non-synthetic data. Data quality issues are also present within the synthetic data which reflect real-world problems and artefacts from the synthetic dataset’s creation. Process mining of synthetic data in healthcare is an emerging field with novel challenges. We conclude that researchers should be aware of the risks when extrapolating results produced from research on synthetic data to real-world scenarios and assess findings with analysts who are able to view the underlying data