The brain: What is critical about it?

We review the recent proposal that the most fascinating brain properties are related to the fact that it always stays close to a second order phase transition. In such conditions, the collective of neuronal groups can reliably generate robust and flexible behavior, because it is known that at the critical point there is the largest abundance of metastable states to choose from. Here we review the motivation, arguments and recent results, as well as further implications of this view of the functioning brain.Comment: Proceedings of BIOCOMP2007 - Collective Dynamics: Topics on Competition and Cooperation in the Biosciences. Vietri sul Mare, Italy (2007

Maintenance of Microbial Cooperation Mediated by Public Goods in Single- and Multiple-Trait Scenarios

Microbes often form densely populated communities, which favor competitive and cooperative interactions. Cooperation among bacteria often occurs through the production of metabolically costly molecules produced by certain individuals that become available to other neighboring individuals; such molecules are called public goods. This type of cooperation is susceptible to exploitation, since nonproducers of a public good can benefit from it while saving the cost of its production (cheating), gaining a fitness advantage over producers (cooperators). Thus, in mixed cultures, cheaters can increase in frequency in the population, relative to cooperators. Sometimes, and as predicted by simple game-theoretic arguments, such increases in the frequency of cheaters cause loss of the cooperative traits by exhaustion of the public goods, eventually leading to a collapse of the entire population. In other cases, however, both cooperators and cheaters remain in coexistence. This raises the question of how cooperation is maintained in microbial populations. Several strategies to prevent cheating have been studied in the context of a single trait and a unique environmental constraint. In this review, we describe current knowledge on the evolutionary stability of microbial cooperation and discuss recent discoveries describing the mechanisms operating in multiple-trait and multiple-constraint settings. We conclude with a consideration of the consequences of these complex interactions, and we briefly discuss the potential role of social interactions involving multiple traits and multiple environmental constraints in the evolution of specialization and division of labor in microbes.info:eu-repo/semantics/publishedVersio

Hydrology of tropical montane cloud forests: A Reassessment

Extending an earlier review of the literature (Bruijnzeel and Proctor, 1995), this paper incorporates the results obtained by post-1993 hydrological and hydrometeorological studies in tropical montane cloud forests (TMCF) situated mostly in Latin America and the Caribbean. Based on the presently available information on the hydrological functioning of TMCF, the most pressing gaps in our understanding are highlighted and suggestions offered as to where and how these could be addressed.Resource /Energy Economics and Policy,

Dynamics of the complex food environment underlying dietary intake in low-income groups:a systems map of associations extracted from a systematic umbrella literature review

Background: Inequalities in obesity pertain in part to differences in dietary intake in different socioeconomic groups. Examining the economic, social, physical and political food environment of low-income groups as a complex adaptive system – i.e. a system of multiple, interconnected factors exerting non-linear influence on an outcome, can enhance the development and assessment of effective policies and interventions by honouring the complexity of lived reality. We aimed to develop and apply novel causal loop diagramming methods in order to construct an evidence-based map of the underlying system of environmental factors that drives dietary intake in low-income groups. Methods: A systematic umbrella review was conducted on literature examining determinants of dietary intake and food environments in low-income youths and adults in high/upper-middle income countries. Information on the determinants and associations between determinants was extracted from reviews of quantitative and qualitative studies. Determinants were organised using the Determinants of Nutrition and Eating (DONE) framework. Associations were synthesised into causal loop diagrams that were subsequently used to interpret the dynamics underlying the food environment and dietary intake. The map was reviewed by an expert panel and systems-based analysis identified the system paradigm, structure, feedback loops and goals. Results: Findings from forty-three reviews and expert consensus were synthesised in an evidence-based map of the complex adaptive system underlying the food environment influencing dietary intake in low-income groups. The system was interpreted as operating within a supply-and-demand, economic paradigm. Five sub-systems (‘geographical accessibility’, ‘household finances’, ‘household resources’, ‘individual influences’, ‘social and cultural influences’) were presented as causal loop diagrams comprising 60 variables, conveying goals which undermine healthy dietary intake. Conclusions: Our findings reveal how poor dietary intake in low-income groups can be presented as an emergent property of a complex adaptive system that sustains a food environment that increases the accessibility, availability, affordability and acceptability of unhealthy foods. In order to reshape system dynamics driving unhealthy food environments, simultaneous, diverse and innovative strategies are needed to facilitate longer-term management of household finances and socially-oriented practices around healthy food production, supply and intake. Ultimately, such strategies must be supported by a system paradigm which prioritises health.</p

An Agent-Based Model of Multifunctional Agricultural Landscape Using Genetic Algorithms

Landowner characteristics influence his/her willingness to change landuse practices to provide more or less environmental benefits. However, most studies of agricultural/environmental polices identify landowners as homogenous. And, the primary cause of failure of many environmental and other polices is the lack of knowledge on how humans may respond to polices based on changes in their behavior (Stern, 1993). From socioeconomic theory and empirical research, landowners can be identified as individuals who make agricultural landuse decisions independently based on their objectives. Identifying possible classes of landowners, assessing how each would potentially respond to policy alternatives, and the resulting pattern of land uses in a watershed or a riparian corridor would be very useful to policy makers as they evaluated alternatives. Agricultural landscapes are important producers of ecosystem services. The mix of ecosystem services and commodity outputs of an agricultural landscape depends on the spatial pattern of land uses emerging from individual land use decisions. However, many empirical studies show that the production of ecosystem services from agricultural landscapes is declining. This is consistent with research conducted over the last few decades showing there is a narrow range of social circumstances under which landowners are willing to make investments in the present to achieve public benefits in the future through investing in natural capital resulting in public goods which are frequently produced as ecosystem services. In this study an agent-based model within a watershed planning context is used to analyze the tradeoffs involved in producing a number of ecosystem services and agricultural commodities given price and policy scenarios while assuming three different types of agents in terms of their goals. The agents represent landowners who have been divided into a number of different groups based on their goals and the size of their farm operations. The multi-agent-based model is developed using a heuristic search and optimization technique called genetic algorithm (GA) (Holland), which belongs to a broader class of evolutionary algorithms. GAs exhibit three properties (1) they start with a population of solution, (2) they explore the solution space through recombination and mutation and (3) they evaluate individual solutions based on their appropriate fitness value(s), for example given profit maximizing agents this would be gross margin. A GA is a heuristic stochastic search and optimization method, which works by mimicking the evolutionary principles and chromosomal processing in natural genetics. The three economic agents that are modeled are based on variations in their objective functions and constraints. This study will help in identifying the tradeoffs associated with various agents in the provision of ecosystem services and agricultural commodities. The agent model developed here will help policy and decision maker identify the various agents within the watershed and assess various policy options based on that information. The study will also help to understand the interaction and feedback between the agents and their environment associated with various policy initiatives. The results of the study indicate that the agent model correctly predicts the actual landuse landcover map by 75 percent.Multifunctional agriculture, Agent based modeling, Genetic Algorithm, Environmental Economics and Policy, Land Economics/Use,

Senior Thesis ST 2011-02

Agriculture in the Arctic is often limited by the low receipt of heat energy, which is often measured in growing degree days (GDD). With the advent of increasingly powerful climate modeling, projection and downscaling techniques, it is becoming possible to examine future climates in high resolution. Recent availability in Alaska has prompted interest in examining the distribution of current and the potential future of local agriculture. The goal of this study was to utilize Scenarios Network for Alaska Planning (SNAP) downscaled, ensemble projections to examine this in terms of GDDs in the Fairbanks North Star Borough of Alaska. Historic and projected monthly mean temperatures were utilized to calculate GDDs and then map the borough at a 4 km2 scale. Additionally, local agriculturalists were interviewed in order to put these theoretical calculations into context. Ultimately, projections of the examined agricultural locations showed an average of a 2% increase in GDD per decade and a 26% increase in GDDs from 1949 to 2099. This project indicated that the North Star Borough will receive increased heat energy due to climate change over the next century that may further enable increased yields and varieties of crops

Antimicrobial Resistance Profile and ExPEC Virulence Potential in Commensal <i>Escherichia coli</i> of Multiple Sources.

We recently described the genetic antimicrobial resistance and virulence profile of a collection of 279 commensal E. coli of food-producing animal (FPA), pet, wildlife and human origin. Phenotypic antimicrobial resistance (AMR) and the role of commensal E. coli as reservoir of extra-intestinal pathogenic Escherichia coli (ExPEC) virulence-associated genes (VAGs) or as potential ExPEC pathogens were evaluated. The most common phenotypic resistance was to tetracycline (76/279, 27.24%), sulfamethoxazole/trimethoprim (73/279, 26.16%), streptomycin and sulfisoxazole (71/279, 25.45% both) among the overall collection. Poultry and rabbit were the sources mostly associated to AMR, with a significant resistance rate (p > 0.01) to quinolones, streptomycin, sulphonamides, tetracycline and, only for poultry, to ampicillin and chloramphenicol. Finally, rabbit was the source mostly associated to colistin resistance. Different pandemic (ST69/69*, ST95, ST131) and emerging (ST10/ST10*, ST23, ST58, ST117, ST405, ST648) ExPEC sequence types (STs) were identified among the collection, especially in poultry source. Both ST groups carried high number of ExPEC VAGs (pandemic ExPEC STs, mean = 8.92; emerging ExPEC STs, mean = 6.43) and showed phenotypic resistance to different antimicrobials (pandemic ExPEC STs, mean = 2.23; emerging ExPEC STs, mean = 2.43), suggesting their role as potential ExPEC pathogens. Variable phenotypic resistance and ExPEC VAG distribution was also observed in uncommon ExPEC lineages, suggesting commensal flora as a potential reservoir of virulence (mean = 3.80) and antimicrobial resistance (mean = 1.69) determinants

The Semiotics of Global Warming: Combating Semiotic Corrruption

The central focus of this paper is the disjunction between the findings of climate science in revealing the threat of global warming and the failure to act appropriately to these warnings. The development of climate science can be illuminated through the perspective provided by Peircian semiotics, but efforts to account for its success as a science and its failure to convince people to act accordingly indicate the need to supplement Peirce’s ideas. The more significant gaps, it is argued, call for the integration of major new ideas. It will be argued that Peirce should be viewed as a Schellingian philosopher, and it will then be shown how this facilitates integration into his philosophy of concepts developed by other philosophers and theorists within this tradition. In particular, Bourdieu’s concepts of the ‘habitus’ and ‘field’ will be integrated with Peirce’s semiotics and used to analyse the achievements and failures of climate science. It will be suggested that the resulting synthesis can augment Peirce’s evolutionary cosmology and so provide a better basis for comprehending and responding to the situation within which we find ourselves