190 research outputs found

    Optical and hyperspectral image analysis for image-guided surgery

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    A fully automatic method for vascular tortuosity feature extraction in the supra-aortic region: unraveling possibilities in stroke treatment planning

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    Vascular tortuosity of supra-aortic vessels is widely considered one of the main reasons for failure and delays in endovascular treatment of large vessel occlusion in patients with acute ischemic stroke. Characterization of tortuosity is a challenging task due to the lack of objective, robust and effective analysis tools. We present a fully automatic method for arterial segmentation, vessel labelling and tortuosity feature extraction applied to the supra-aortic region. A sample of 566 computed tomography angiography scans from acute ischemic stroke patients (aged 74.8 ± 12.9, 51.0% females) were used for training, validation and testing of a segmentation module based on a U-Net architecture (162 cases) and a vessel labelling module powered by a graph U-Net (566 cases). Successively, 30 cases were processed for testing of a tortuosity feature extraction module. Measurements obtained through automatic processing were compared to manual annotations from two observers for a thorough validation of the method. The proposed feature extraction method presented similar performance to the inter-rater variability observed in the measurement of 33 geometrical and morphological features of the arterial anatomy in the supra-aortic region. This system will contribute to the development of more complex models to advance the treatment of stroke by adding immediate automation, objectivity, repeatability and robustness to the vascular tortuosity characterization of patients

    An extension to VORO++ for multithreaded computation of Voronoi cells

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    VORO++ is a software library written in C++ for computing the Voronoi tessellation, a technique in computational geometry that is widely used for analyzing systems of particles. VORO++ was released in 2009 and is based on computing the Voronoi cell for each particle individually. Here, we take advantage of modern computer hardware, and extend the original serial version to allow for multithreaded computation of Voronoi cells via the OpenMP application programming interface. We test the performance of the code, and demonstrate that we can achieve parallel efficiencies greater than 95% in many cases. The multithreaded extension follows standard OpenMP programming paradigms, allowing it to be incorporated into other programs. We provide an example of this using the VoroTop software library, performing a multithreaded Voronoi cell topology analysis of up to 102.4 million particles.Comment: Fix typo and section number

    Longwall mining-induced fracture characterisation based on seismic monitoring

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    Despite several technological advancements, mining-induced fractures are still critical for the safety of underground coal mines. Rocking fracturing as a natural response to mining activities can pose a potential hazard to mine operators, equipment, and infrastructures. The fractures occur not only around the working face that can be visually measured but also above and in front of the working face and where geological structures are affected by mining activities. Therefore, it is of importance to detect and investigate the properties of mining-induced fractures. Mining-induced seismicity has been generated due to rock fracturing during progressive mining activities and can provide critical fracture information. Currently, the application of using seismic monitoring to characterise fractures has remained relatively challenged in mining because mining-induced fractures are initiated by stress change and strata movement after mineral extraction. Compared to seismic monitoring in the oil and gas industry, the fractures and seismic responses may show different characteristics. Therefore, seismic monitoring in mines lacks a comprehensive investigation of received seismic signals to the properties of induced fractures and the effect on mine workings by these fractures. Additionally, constraints such as the quality of seismic signals and the deficiency of correlation analysis of seismic events in underground mining pose great challenges in using seismic data for hazard prediction. This thesis aims to address these challenges in using seismic monitoring to understand and characterise mining-induced fractures by (1) calculating fracture properties related to seismic source location, magnitude and mechanism based on uniaxial seismic data, (2) spatial and temporal correlation analysis of seismic events, and (3) inspecting fracture distributions and simulation of the fractured zone in longwall coal mines. Firstly, since cheap and easily removable uniaxial geophones close to production areas are preferable in coal mines, a novel method to use uniaxial signal and moment tensor inversion to generate synthetic triaxial waves is designed for a comprehensive description of the fracture properties, including location, radius, aperture and orientation. Secondly, to apply seismic data for advanced analysis, such as rockburst prediction and caving assessment, the correlation of seismic events is proved to be quantitatively assessable, and their correlations may vary throughout the mineral extraction process. The spatial and temporal correlation of seismic event energy is quantitatively analysed using various statistical methods, including autocorrelation function (ACF), semivariogram and Moran's I analysis. In addition, based on the integrated spatial-temporal (ST) correlation assessment, seismic events are further classified into seven clusters to assess the correlations within individual clusters. Finally, several source parameters such as seismic moment (M0), seismic source radius (R), fracture aperture (τ), failure type and fracture orientation were used to characterise fractures induced by longwall mining. This thesis also presents the fracture patterns induced caused progressive longwall mining for the first time. Besides, a discrete element method (DEM) model with seismic-derived fractures is generated and proves the impact of mining-induced fractures on altering stress conditions during mineral extraction. In addition, with the analysis of the seismic source mechanism and a synthetic triaxial method, a discrete fracture network (DFN) is generated from monitored seismic events to restore complete induced fractures. Overall, the outcomes of this study lead to a comprehensive assessment of mining-induced fracture properties based on real-time seismic monitoring, demonstrating its significant potential for hazard prediction and improving the safety of resource recovery

    Machine Learning and Its Application to Reacting Flows

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    This open access book introduces and explains machine learning (ML) algorithms and techniques developed for statistical inferences on a complex process or system and their applications to simulations of chemically reacting turbulent flows. These two fields, ML and turbulent combustion, have large body of work and knowledge on their own, and this book brings them together and explain the complexities and challenges involved in applying ML techniques to simulate and study reacting flows. This is important as to the world’s total primary energy supply (TPES), since more than 90% of this supply is through combustion technologies and the non-negligible effects of combustion on environment. Although alternative technologies based on renewable energies are coming up, their shares for the TPES is are less than 5% currently and one needs a complete paradigm shift to replace combustion sources. Whether this is practical or not is entirely a different question, and an answer to this question depends on the respondent. However, a pragmatic analysis suggests that the combustion share to TPES is likely to be more than 70% even by 2070. Hence, it will be prudent to take advantage of ML techniques to improve combustion sciences and technologies so that efficient and “greener” combustion systems that are friendlier to the environment can be designed. The book covers the current state of the art in these two topics and outlines the challenges involved, merits and drawbacks of using ML for turbulent combustion simulations including avenues which can be explored to overcome the challenges. The required mathematical equations and backgrounds are discussed with ample references for readers to find further detail if they wish. This book is unique since there is not any book with similar coverage of topics, ranging from big data analysis and machine learning algorithm to their applications for combustion science and system design for energy generation

    Discrete slip plane modeling of heterogeneous microplasticity:Formulation and integration with experiments

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    Optical and hyperspectral image analysis for image-guided surgery

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    Multi-resolution mapping and planning for UAV navigation in attitude constrained environments

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    In this thesis we aim to bridge the gap between high quality map reconstruction and Unmanned Aerial Vehicles (UAVs) SE(3) motion planning in challenging environments with narrow openings, such as disaster areas, which requires attitude to be considered. We propose an efficient system that leverages the concept of adaptive-resolution volumetric mapping, which naturally integrates with the hierarchical decomposition of space in an octree data structure. Instead of a Truncated Signed Distance Function (TSDF), we adopt mapping of occupancy probabilities in log-odds representation, which allows representation of both surfaces, as well as the entire free, i.e.\ observed space, as opposed to unobserved space. We introduce a method for choosing resolution -on the fly- in real-time by means of a multi-scale max-min pooling of the input depth image. The notion of explicit free space mapping paired with the spatial hierarchy in the data structure, as well as map resolution, allows for collision queries, as needed for robot motion planning, at unprecedented speed. Our mapping strategy supports pinhole cameras as well as spherical sensor models. Additionally, we introduce a first-of-a-kind global minimum cost path search method based on A* that considers attitude along the path. State-of-the-art methods incorporate attitude only in the refinement stage. To make the problem tractable, our method exploits an adaptive and coarse-to-fine approach using global and local A* runs, plus an efficient method to introduce the UAV attitude in the process. We integrate our method with an SE(3) trajectory optimisation method based on a safe-flight-corridor, yielding a complete path planning pipeline. We quantitatively evaluate our mapping strategy in terms of mapping accuracy, memory, runtime performance, and planning performance showing improvements over the state-of-the-art, particularly in cases requiring high resolution maps. Furthermore, extensive evaluation is undertaken using the AirSim flight simulator under closed loop control in a set of randomised maps, allowing us to quantitatively assess our path initialisation method. We show that it achieves significantly higher success rates than the baselines, at a reduced computational burden.Open Acces

    Modelling, Monitoring, Control and Optimization for Complex Industrial Processes

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    This reprint includes 22 research papers and an editorial, collected from the Special Issue "Modelling, Monitoring, Control and Optimization for Complex Industrial Processes", highlighting recent research advances and emerging research directions in complex industrial processes. This reprint aims to promote the research field and benefit the readers from both academic communities and industrial sectors
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