1,721 research outputs found
One-class classifiers based on entropic spanning graphs
One-class classifiers offer valuable tools to assess the presence of outliers
in data. In this paper, we propose a design methodology for one-class
classifiers based on entropic spanning graphs. Our approach takes into account
the possibility to process also non-numeric data by means of an embedding
procedure. The spanning graph is learned on the embedded input data and the
outcoming partition of vertices defines the classifier. The final partition is
derived by exploiting a criterion based on mutual information minimization.
Here, we compute the mutual information by using a convenient formulation
provided in terms of the -Jensen difference. Once training is
completed, in order to associate a confidence level with the classifier
decision, a graph-based fuzzy model is constructed. The fuzzification process
is based only on topological information of the vertices of the entropic
spanning graph. As such, the proposed one-class classifier is suitable also for
data characterized by complex geometric structures. We provide experiments on
well-known benchmarks containing both feature vectors and labeled graphs. In
addition, we apply the method to the protein solubility recognition problem by
considering several representations for the input samples. Experimental results
demonstrate the effectiveness and versatility of the proposed method with
respect to other state-of-the-art approaches.Comment: Extended and revised version of the paper "One-Class Classification
Through Mutual Information Minimization" presented at the 2016 IEEE IJCNN,
Vancouver, Canad
Disease spread through animal movements: a static and temporal network analysis of pig trade in Germany
Background: Animal trade plays an important role for the spread of infectious
diseases in livestock populations. As a case study, we consider pig trade in
Germany, where trade actors (agricultural premises) form a complex network. The
central question is how infectious diseases can potentially spread within the
system of trade contacts. We address this question by analyzing the underlying
network of animal movements.
Methodology/Findings: The considered pig trade dataset spans several years
and is analyzed with respect to its potential to spread infectious diseases.
Focusing on measurements of network-topological properties, we avoid the usage
of external parameters, since these properties are independent of specific
pathogens. They are on the contrary of great importance for understanding any
general spreading process on this particular network. We analyze the system
using different network models, which include varying amounts of information:
(i) static network, (ii) network as a time series of uncorrelated snapshots,
(iii) temporal network, where causality is explicitly taken into account.
Findings: Our approach provides a general framework for a
topological-temporal characterization of livestock trade networks. We find that
a static network view captures many relevant aspects of the trade system, and
premises can be classified into two clearly defined risk classes. Moreover, our
results allow for an efficient allocation strategy for intervention measures
using centrality measures. Data on trade volume does barely alter the results
and is therefore of secondary importance. Although a static network description
yields useful results, the temporal resolution of data plays an outstanding
role for an in-depth understanding of spreading processes. This applies in
particular for an accurate calculation of the maximum outbreak size.Comment: main text 33 pages, 17 figures, supporting information 7 pages, 7
figure
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