Finding Connected Dense kk-Subgraphs

Given a connected graph $G$ on $n$ vertices and a positive integer $k\le n$, a subgraph of $G$ on $k$ vertices is called a $k$-subgraph in $G$. We design combinatorial approximation algorithms for finding a connected $k$-subgraph in $G$ such that its density is at least a factor $\Omega(\max\{n^{-2/5},k^2/n^2\})$ of the density of the densest $k$-subgraph in $G$ (which is not necessarily connected). These particularly provide the first non-trivial approximations for the densest connected $k$-subgraph problem on general graphs

Exact Clustering of Weighted Graphs via Semidefinite Programming

As a model problem for clustering, we consider the densest k-disjoint-clique problem of partitioning a weighted complete graph into k disjoint subgraphs such that the sum of the densities of these subgraphs is maximized. We establish that such subgraphs can be recovered from the solution of a particular semidefinite relaxation with high probability if the input graph is sampled from a distribution of clusterable graphs. Specifically, the semidefinite relaxation is exact if the graph consists of k large disjoint subgraphs, corresponding to clusters, with weight concentrated within these subgraphs, plus a moderate number of outliers. Further, we establish that if noise is weakly obscuring these clusters, i.e, the between-cluster edges are assigned very small weights, then we can recover significantly smaller clusters. For example, we show that in approximately sparse graphs, where the between-cluster weights tend to zero as the size n of the graph tends to infinity, we can recover clusters of size polylogarithmic in n. Empirical evidence from numerical simulations is also provided to support these theoretical phase transitions to perfect recovery of the cluster structure

JGraphT -- A Java library for graph data structures and algorithms

Mathematical software and graph-theoretical algorithmic packages to efficiently model, analyze and query graphs are crucial in an era where large-scale spatial, societal and economic network data are abundantly available. One such package is JGraphT, a programming library which contains very efficient and generic graph data-structures along with a large collection of state-of-the-art algorithms. The library is written in Java with stability, interoperability and performance in mind. A distinctive feature of this library is the ability to model vertices and edges as arbitrary objects, thereby permitting natural representations of many common networks including transportation, social and biological networks. Besides classic graph algorithms such as shortest-paths and spanning-tree algorithms, the library contains numerous advanced algorithms: graph and subgraph isomorphism; matching and flow problems; approximation algorithms for NP-hard problems such as independent set and TSP; and several more exotic algorithms such as Berge graph detection. Due to its versatility and generic design, JGraphT is currently used in large-scale commercial, non-commercial and academic research projects. In this work we describe in detail the design and underlying structure of the library, and discuss its most important features and algorithms. A computational study is conducted to evaluate the performance of JGraphT versus a number of similar libraries. Experiments on a large number of graphs over a variety of popular algorithms show that JGraphT is highly competitive with other established libraries such as NetworkX or the BGL.Comment: Major Revisio

Approximating ATSP by Relaxing Connectivity

The standard LP relaxation of the asymmetric traveling salesman problem has been conjectured to have a constant integrality gap in the metric case. We prove this conjecture when restricted to shortest path metrics of node-weighted digraphs. Our arguments are constructive and give a constant factor approximation algorithm for these metrics. We remark that the considered case is more general than the directed analog of the special case of the symmetric traveling salesman problem for which there were recent improvements on Christofides' algorithm. The main idea of our approach is to first consider an easier problem obtained by significantly relaxing the general connectivity requirements into local connectivity conditions. For this relaxed problem, it is quite easy to give an algorithm with a guarantee of 3 on node-weighted shortest path metrics. More surprisingly, we then show that any algorithm (irrespective of the metric) for the relaxed problem can be turned into an algorithm for the asymmetric traveling salesman problem by only losing a small constant factor in the performance guarantee. This leaves open the intriguing task of designing a "good" algorithm for the relaxed problem on general metrics.Comment: 25 pages, 2 figures, fixed some typos in previous versio

Algorithms for Graph-Constrained Coalition Formation in the Real World

Coalition formation typically involves the coming together of multiple, heterogeneous, agents to achieve both their individual and collective goals. In this paper, we focus on a special case of coalition formation known as Graph-Constrained Coalition Formation (GCCF) whereby a network connecting the agents constrains the formation of coalitions. We focus on this type of problem given that in many real-world applications, agents may be connected by a communication network or only trust certain peers in their social network. We propose a novel representation of this problem based on the concept of edge contraction, which allows us to model the search space induced by the GCCF problem as a rooted tree. Then, we propose an anytime solution algorithm (CFSS), which is particularly efficient when applied to a general class of characteristic functions called $m+a$ functions. Moreover, we show how CFSS can be efficiently parallelised to solve GCCF using a non-redundant partition of the search space. We benchmark CFSS on both synthetic and realistic scenarios, using a real-world dataset consisting of the energy consumption of a large number of households in the UK. Our results show that, in the best case, the serial version of CFSS is 4 orders of magnitude faster than the state of the art, while the parallel version is 9.44 times faster than the serial version on a 12-core machine. Moreover, CFSS is the first approach to provide anytime approximate solutions with quality guarantees for very large systems of agents (i.e., with more than 2700 agents).Comment: Accepted for publication, cite as "in press

Low-Congestion Shortcut and Graph Parameters

Distributed graph algorithms in the standard CONGEST model often exhibit the time-complexity lower bound of Omega~(sqrt{n} + D) rounds for many global problems, where n is the number of nodes and D is the diameter of the input graph. Since such a lower bound is derived from special "hard-core" instances, it does not necessarily apply to specific popular graph classes such as planar graphs. The concept of low-congestion shortcuts is initiated by Ghaffari and Haeupler [SODA2016] for addressing the design of CONGEST algorithms running fast in restricted network topologies. Specifically, given a specific graph class X, an f-round algorithm of constructing shortcuts of quality q for any instance in X results in O~(q + f)-round algorithms of solving several fundamental graph problems such as minimum spanning tree and minimum cut, for X. The main interest on this line is to identify the graph classes allowing the shortcuts which are efficient in the sense of breaking O~(sqrt{n}+D)-round general lower bounds. In this paper, we consider the relationship between the quality of low-congestion shortcuts and three major graph parameters, chordality, diameter, and clique-width. The main contribution of the paper is threefold: (1) We show an O(1)-round algorithm which constructs a low-congestion shortcut with quality O(kD) for any k-chordal graph, and prove that the quality and running time of this construction is nearly optimal up to polylogarithmic factors. (2) We present two algorithms, each of which constructs a low-congestion shortcut with quality O~(n^{1/4}) in O~(n^{1/4}) rounds for graphs of D=3, and that with quality O~(n^{1/3}) in O~(n^{1/3}) rounds for graphs of D=4 respectively. These results obviously deduce two MST algorithms running in O~(n^{1/4}) and O~(n^{1/3}) rounds for D=3 and 4 respectively, which almost close the long-standing complexity gap of the MST construction in small-diameter graphs originally posed by Lotker et al. [Distributed Computing 2006]. (3) We show that bounding clique-width does not help the construction of good shortcuts by presenting a network topology of clique-width six where the construction of MST is as expensive as the general case

Where Graph Topology Matters: The Robust Subgraph Problem

Robustness is a critical measure of the resilience of large networked systems, such as transportation and communication networks. Most prior works focus on the global robustness of a given graph at large, e.g., by measuring its overall vulnerability to external attacks or random failures. In this paper, we turn attention to local robustness and pose a novel problem in the lines of subgraph mining: given a large graph, how can we find its most robust local subgraph (RLS)? We define a robust subgraph as a subset of nodes with high communicability among them, and formulate the RLS-PROBLEM of finding a subgraph of given size with maximum robustness in the host graph. Our formulation is related to the recently proposed general framework for the densest subgraph problem, however differs from it substantially in that besides the number of edges in the subgraph, robustness also concerns with the placement of edges, i.e., the subgraph topology. We show that the RLS-PROBLEM is NP-hard and propose two heuristic algorithms based on top-down and bottom-up search strategies. Further, we present modifications of our algorithms to handle three practical variants of the RLS-PROBLEM. Experiments on synthetic and real-world graphs demonstrate that we find subgraphs with larger robustness than the densest subgraphs even at lower densities, suggesting that the existing approaches are not suitable for the new problem setting.Comment: 13 pages, 10 Figures, 3 Tables, to appear at SDM 2015 (9 pages only