Graph database management systems: storage, management and query processing

The proliferation of graph data, generated from diverse sources, have given rise to many research efforts concerning graph analysis. Interactions in social networks, publication networks, protein networks, software code dependencies and transportation systems are all examples of graph-structured data originating from a variety of application domains and demonstrating different characteristics. In recent years, graph database management systems (GDBMS) have been introduced for the management and analysis of graph data. Motivated by the growing number of real-life applications making use of graph database systems, this thesis focuses on the effectiveness and efficiency aspects of such systems. Specifically, we study the following topics relevant to graph database systems: (i) modeling large-scale applications in GDBMS; (ii) storage and indexing issues in GDBMS, and (iii) efficient query processing in GDBMS. In this thesis, we adopt two different application scenarios to examine how graph database systems can model complex features and perform relevant queries on each of them. Motivated by the popular application of social network analytics, we selected Twitter, a microblogging platform, to conduct our detailed analysis. Addressing limitations of existing models, we pro- pose a data model for the Twittersphere that proactively captures Twitter-specific interactions. We examine the feasibility of running analytical queries on GDBMS and offer empirical analysis of the performance of the proposed approach. Next, we consider a use case of modeling software code dependencies in a graph database system, and investigate how these systems can support capturing the evolution of a codebase overtime. We study a code comprehension tool that extracts software dependencies and stores them in a graph database. On a versioned graph built using a very large codebase, we demonstrate how existing code comprehension queries can be efficiently processed and also show the benefit of running queries across multiple versions. Another important aspect of this thesis is the study of storage aspects of graph systems. Throughput of many graph queries can be significantly affected by disk I/O performance; therefore graph database systems need to focus on effective graph storage for optimising disk operations. We observe that the locality of edges plays an important role and we address the edge-labeling problem which aims to label both incoming and outgoing edges of a graph maximizing the ‘edge-consecutiveness’ metric. By achieving a better layout and locality of edges on disk, we show that our proposed algorithms result in significantly improved disk I/O performance leading to faster execution of neighbourhood queries. Some applications require the integrated processing of queries from graph and the textual domains within a graph database system. Aggregation of these dimensions facilitates gaining key insights in several application scenarios. For example, in a social network setting, one may want to find the closest k users in the network (graph traversal) who talk about a particular topic A (textual search). Motivated by such practical use cases, in this thesis we study the top-k social-textual ranking query that essentially requires efficient combination of a keyword search query with a graph traversal. We propose algorithms that leverage graph partitioning techniques, based on the premise that socially close users will be placed within the same partition, allowing more localised computations. We show that our proposed approaches are able to achieve significantly better results compared to standard baselines and demonstrating robust behaviour under changing parameters

Advanced Protocols for Peer-to-Peer Data Transmission in Wireless Gigabit Networks

This thesis tackles problems on IEEE 802.11 MAC layer, network layer and application layer, to further push the performance of wireless P2P applications in a holistic way. It contributes to the better understanding and utilization of two major IEEE 802.11 MAC features, frame aggregation and block acknowledgement, to the design and implementation of opportunistic networks on off-the-shelf hardware and proposes a document exchange protocol, including document recommendation. First, this thesis contributes a measurement study of the A-MPDU frame aggregation behavior of IEEE 802.11n in a real-world, multi-hop, indoor mesh testbed. Furthermore, this thesis presents MPDU payload adaptation (MPA) to utilize A-MPDU subframes to increase the overall throughput under bad channel conditions. MPA adapts the size of MAC protocol data units to channel conditions, to increase the throughput and lower the delay in error-prone channels. The results suggest that under erroneous conditions throughput can be maximized by limiting the MPDU size. As second major contribution, this thesis introduces Neighborhood-aware OPPortunistic networking on Smartphones (NOPPoS). NOPPoS creates an opportunistic, pocket-switched network using current generation, off-the-shelf mobile devices. As main novel feature, NOPPoS is highly responsive to node mobility due to periodic, low-energy scans of its environment, using Bluetooth Low Energy advertisements. The last major contribution is the Neighborhood Document Sharing (NDS) protocol. NDS enables users to discover and retrieve arbitrary documents shared by other users in their proximity, i.e. in the communication range of their IEEE 802.11 interface. However, IEEE 802.11 connections are only used on-demand during file transfers and indexing of files in the proximity of the user. Simulations show that NDS interconnects over 90 \% of all devices in communication range. Finally, NDS is extended by the content recommendation system User Preference-based Probability Spreading (UPPS), a graph-based approach. It integrates user-item scoring into a graph-based tag-aware item recommender system. UPPS utilizes novel formulas for affinity and similarity scoring, taking into account user-item preference in the mass diffusion of the recommender system. The presented results show that UPPS is a significant improvement to previous approaches

Storage and aggregation for fast analytics systems

Computing in the last decade has been characterized by the rise of data- intensive scalable computing (DISC) systems. In particular, recent years have wit- nessed a rapid growth in the popularity of fast analytics systems. These systems exemplify a trend where queries that previously involved batch-processing (e.g., run- ning a MapReduce job) on a massive amount of data, are increasingly expected to be answered in near real-time with low latency. This dissertation addresses the problem that existing designs for various components used in the software stack for DISC sys- tems do not meet the requirements demanded by fast analytics applications. In this work, we focus specifically on two components: 1. Key-value storage: Recent work has focused primarily on supporting reads with high throughput and low latency. However, fast analytics applications require that new data entering the system (e.g., new web-pages crawled, currently trend- ing topics) be quickly made available to queries and analysis codes. This means that along with supporting reads efficiently, these systems must also support writes with high throughput, which current systems fail to do. In the first part of this work, we solve this problem by proposing a new key-value storage system – called the WriteBuffer (WB) Tree – that provides up to 30× higher write per- formance and similar read performance compared to current high-performance systems. 2. GroupBy-Aggregate: Fast analytics systems require support for fast, incre- mental aggregation of data for with low-latency access to results. Existing techniques are memory-inefficient and do not support incremental aggregation efficiently when aggregate data overflows to disk. In the second part of this dis- sertation, we propose a new data structure called the Compressed Buffer Tree (CBT) to implement memory-efficient in-memory aggregation. We also show how the WB Tree can be modified to support efficient disk-based aggregation.Ph.D

Advances in knowledge discovery and data mining Part II

19th Pacific-Asia Conference, PAKDD 2015, Ho Chi Minh City, Vietnam, May 19-22, 2015, Proceedings, Part II</p

Tracking the Temporal-Evolution of Supernova Bubbles in Numerical Simulations

The study of low-dimensional, noisy manifolds embedded in a higher dimensional space has been extremely useful in many applications, from the chemical analysis of multi-phase flows to simulations of galactic mergers. Building a probabilistic model of the manifolds has helped in describing their essential properties and how they vary in space. However, when the manifold is evolving through time, a joint spatio-temporal modelling is needed, in order to fully comprehend its nature. We propose a first-order Markovian process that propagates the spatial probabilistic model of a manifold at fixed time, to its adjacent temporal stages. The proposed methodology is demonstrated using a particle simulation of an interacting dwarf galaxy to describe the evolution of a cavity generated by a Supernov

31th International Conference on Information Modelling and Knowledge Bases

Information modelling is becoming more and more important topic for researchers, designers, and users of information systems.The amount and complexity of information itself, the number of abstractionlevels of information, and the size of databases and knowledge bases arecontinuously growing. Conceptual modelling is one of the sub-areas ofinformation modelling. The aim of this conference is to bring together experts from different areas of computer science and other disciplines, who have a common interest in understanding and solving problems on information modelling and knowledge bases, as well as applying the results of research to practice. We also aim to recognize and study new areas on modelling and knowledge bases to which more attention should be paid. Therefore philosophy and logic, cognitive science, knowledge management, linguistics and management science are relevant areas, too. In the conference, there will be three categories of presentations, i.e. full papers, short papers and position papers

AIUCD 2021 - Book of Extended Abstracts

Il decimo convegno annuale dell'Associazione per l’Informatica Umanistica e la Cultura Digitale ha nell’edizione 2021 un titolo peculiare e importante: "DH per la società: e-guaglianza, partecipazione, diritti e valori nell’era digitale". Questo volume raccoglie gli abstract estesi e sottoposti a review per la conferenza di AIUCD2021 tenutasi in forma virtuale a Pisa

AIUCD2018 - Book of Abstracts

Questo volume raccoglie gli abstract dei paper presentati al Settimo Convegno Annuale AIUCD 2018 (Bari, 31 gennaio – 2 febbraio 2018) dal titolo "Patrimoni culturali nell’era digitale. Memorie, culture umanistiche e tecnologia" (Cultural Heritage in the Digital Age. Memory, Humanities and Technologies). Gli abstract pubblicati in questo volume hanno ottenuto il parere favorevole da parte di valutatori esperti della materia, attraverso un processo di revisione anonima mediante double-blind peer review sotto la responsabilità del Comitato Scientifico di AIUCD. Il programma della conferenza AIUCD 2018 è disponibile online all'indirizzo http://www.aiucd2018.uniba.it/