Evaluation of approximate pattern matching algorithms for OCR texts

In recent years there has been going on a large process of digitising old books, articles and newspapers. These documents are scanned and then processed with Optical Character Recognition (OCR) software to obtain their text equivalent. However, due to the (usually) poor quality of the original papers, the OCR software produces text which is not 100% accurate. A simple search for a pattern in the resulting text would only retrieve those occurrences that were accurately interpreted, but will ignore incorrectly spelled or distorted variations. In this paper we make use of the recently devised algorithm by Christodoulakis and Brey (2008), on the edit distance with combinations and splits, to perform approximate pattern matching for OCR texts. We then compare its performance against classic generalpurpose approximate matching algorithms

Matching records in multiple databases using a hybridization of several technologies.

A major problem with integrating information from multiple databases is that the same data objects can exist in inconsistent data formats across databases and a variety of attribute variations, making it difficult to identify matching objects using exact string matching. In this research, a variety of models and methods have been developed and tested to alleviate this problem. A major motivation for this research is that the lack of efficient tools for patient record matching still exists for health care providers. This research is focused on the approximate matching of patient records with third party payer databases. This is a major need for all medical treatment facilities and hospitals that try to match patient treatment records with records of insurance companies, Medicare, Medicaid and the veteran\u27s administration. Therefore, the main objectives of this research effort are to provide an approximate matching framework that can draw upon multiple input service databases, construct an identity, and match to third party payers with the highest possible accuracy in object identification and minimal user interactions. This research describes the object identification system framework that has been developed from a hybridization of several technologies, which compares the object\u27s shared attributes in order to identify matching object. Methodologies and techniques from other fields, such as information retrieval, text correction, and data mining, are integrated to develop a framework to address the patient record matching problem. This research defines the quality of a match in multiple databases by using quality metrics, such as Precision, Recall, and F-measure etc, which are commonly used in Information Retrieval. The performance of resulting decision models are evaluated through extensive experiments and found to perform very well. The matching quality performance metrics, such as precision, recall, F-measure, and accuracy, are over 99%, ROC index are over 99.50% and mismatching rates are less than 0.18% for each model generated based on different data sets. This research also includes a discussion of the problems in patient records matching; an overview of relevant literature for the record matching problem and extensive experimental evaluation of the methodologies, such as string similarity functions and machine learning that are utilized. Finally, potential improvements and extensions to this work are also presented

Learning with Weak Annotations for Text in the Wild Detection and Recognition

V této práci představujeme metodu využívající slabě anotované obrázky pro vylepšení systémů pro extrakci textu. Slabá antoace spočívá v seznamu textů, které se v daném obrázku mohou vyskytovat, ale nevíme kde. Metoda používá libovolný existující systém pro rozpoznávání textu k získání oblastí, kde se pravděpodobně vyskytuje text, spolu s ne nutně správným přepisem. Výsledkem procesu zahrnujícího párování nepřesných přepisů se slabými anotacemi a prohledávání okolí vedené Levenshtein vzdáleností jsou skoro bezchybně lokalizované texty, se kterými dále zacházíme jako s pseudo-anotacemi využívanými k učení. Aplikování metody na dva slabě anotované datasety a doučení použitého systému pomocí získaných pseudo-anotací ukazuje, že námi navržený proces konzistentně zlepšuje přesnost rozpoznávání na různých datasetech (jiných doménách) běžně využívaných k testování a velmi výrazně zvyšuje přesnost na stejném datasetu. Metodu lze použít iterativně.In this work, we present a method for exploiting weakly annotated images to improve text extraction pipelines. The weak annotation of an image is a list of texts that are likely to appear in the image without any information about the location. An arbitrary existing end-to-end text recognition system is used to obtain text region proposals and their, possibly erroneous, transcriptions. A process that includes imprecise transcription to annotation matching and edit distance guided neighbourhood search produces nearly error-free, localised instances of scene text, which we treat as ``pseudo ground truth'' used for training. We apply the method to two weakly-annotated datasets and use the obtained pseudo ground truth to re-train the end-to-end system. The process consistently improves the accuracy of a state of the art recognition model across different benchmark datasets (image domains) as well as providing a significant performance boost on the same dataset, further improving when applied iteratively

Advanced document data extraction techniques to improve supply chain performance

In this thesis, a novel machine learning technique to extract text-based information from scanned images has been developed. This information extraction is performed in the context of scanned invoices and bills used in financial transactions. These financial transactions contain a considerable amount of data that must be extracted, refined, and stored digitally before it can be used for analysis. Converting this data into a digital format is often a time-consuming process. Automation and data optimisation show promise as methods for reducing the time required and the cost of Supply Chain Management (SCM) processes, especially Supplier Invoice Management (SIM), Financial Supply Chain Management (FSCM) and Supply Chain procurement processes. This thesis uses a cross-disciplinary approach involving Computer Science and Operational Management to explore the benefit of automated invoice data extraction in business and its impact on SCM. The study adopts a multimethod approach based on empirical research, surveys, and interviews performed on selected companies.The expert system developed in this thesis focuses on two distinct areas of research: Text/Object Detection and Text Extraction. For Text/Object Detection, the Faster R-CNN model was analysed. While this model yields outstanding results in terms of object detection, it is limited by poor performance when image quality is low. The Generative Adversarial Network (GAN) model is proposed in response to this limitation. The GAN model is a generator network that is implemented with the help of the Faster R-CNN model and a discriminator that relies on PatchGAN. The output of the GAN model is text data with bonding boxes. For text extraction from the bounding box, a novel data extraction framework consisting of various processes including XML processing in case of existing OCR engine, bounding box pre-processing, text clean up, OCR error correction, spell check, type check, pattern-based matching, and finally, a learning mechanism for automatizing future data extraction was designed. Whichever fields the system can extract successfully are provided in key-value format.The efficiency of the proposed system was validated using existing datasets such as SROIE and VATI. Real-time data was validated using invoices that were collected by two companies that provide invoice automation services in various countries. Currently, these scanned invoices are sent to an OCR system such as OmniPage, Tesseract, or ABBYY FRE to extract text blocks and later, a rule-based engine is used to extract relevant data. While the system’s methodology is robust, the companies surveyed were not satisfied with its accuracy. Thus, they sought out new, optimized solutions. To confirm the results, the engines were used to return XML-based files with text and metadata identified. The output XML data was then fed into this new system for information extraction. This system uses the existing OCR engine and a novel, self-adaptive, learning-based OCR engine. This new engine is based on the GAN model for better text identification. Experiments were conducted on various invoice formats to further test and refine its extraction capabilities. For cost optimisation and the analysis of spend classification, additional data were provided by another company in London that holds expertise in reducing their clients' procurement costs. This data was fed into our system to get a deeper level of spend classification and categorisation. This helped the company to reduce its reliance on human effort and allowed for greater efficiency in comparison with the process of performing similar tasks manually using excel sheets and Business Intelligence (BI) tools.The intention behind the development of this novel methodology was twofold. First, to test and develop a novel solution that does not depend on any specific OCR technology. Second, to increase the information extraction accuracy factor over that of existing methodologies. Finally, it evaluates the real-world need for the system and the impact it would have on SCM. This newly developed method is generic and can extract text from any given invoice, making it a valuable tool for optimizing SCM. In addition, the system uses a template-matching approach to ensure the quality of the extracted information

Advancing Multi-Modal Deep Learning: Towards Language-Grounded Visual Understanding

Using deep learning, computer vision now rivals people at object recognition and detection, opening doors to tackle new challenges in image understanding. Among these challenges, understanding and reasoning about language grounded visual content is of fundamental importance to advancing artificial intelligence. Recently, multiple datasets and algorithms have been created as proxy tasks towards this goal, with visual question answering (VQA) being the most widely studied. In VQA, an algorithm needs to produce an answer to a natural language question about an image. However, our survey of datasets and algorithms for VQA uncovered several sources of dataset bias and sub-optimal evaluation metrics that allowed algorithms to perform well by merely exploiting superficial statistical patterns. In this dissertation, we describe new algorithms and datasets that address these issues. We developed two new datasets and evaluation metrics that enable a more accurate measurement of abilities of a VQA model, and also expand VQA to include new abilities, such as reading text, handling out-of-vocabulary words, and understanding data-visualization. We also created new algorithms for VQA that have helped advance the state-of-the-art for VQA, including an algorithm that surpasses humans on two different chart question answering datasets about bar-charts, line-graphs and pie charts. Finally, we provide a holistic overview of several yet-unsolved challenges in not only VQA but vision and language research at large. Despite enormous progress, we find that a robust understanding and integration of vision and language is still an elusive goal, and much of the progress may be misleading due to dataset bias, superficial correlations and flaws in standard evaluation metrics. We carefully study and categorize these issues for several vision and language tasks and outline several possible paths towards development of safe, robust and trustworthy AI for language-grounded visual understanding

Mathematical Expression Recognition based on Probabilistic Grammars

[EN] Mathematical notation is well-known and used all over the world. Humankind has evolved from simple methods representing countings to current well-defined math notation able to account for complex problems. Furthermore, mathematical expressions constitute a universal language in scientific fields, and many information resources containing mathematics have been created during the last decades. However, in order to efficiently access all that information, scientific documents have to be digitized or produced directly in electronic formats. Although most people is able to understand and produce mathematical information, introducing math expressions into electronic devices requires learning specific notations or using editors. Automatic recognition of mathematical expressions aims at filling this gap between the knowledge of a person and the input accepted by computers. This way, printed documents containing math expressions could be automatically digitized, and handwriting could be used for direct input of math notation into electronic devices. This thesis is devoted to develop an approach for mathematical expression recognition. In this document we propose an approach for recognizing any type of mathematical expression (printed or handwritten) based on probabilistic grammars. In order to do so, we develop the formal statistical framework such that derives several probability distributions. Along the document, we deal with the definition and estimation of all these probabilistic sources of information. Finally, we define the parsing algorithm that globally computes the most probable mathematical expression for a given input according to the statistical framework. An important point in this study is to provide objective performance evaluation and report results using public data and standard metrics. We inspected the problems of automatic evaluation in this field and looked for the best solutions. We also report several experiments using public databases and we participated in several international competitions. Furthermore, we have released most of the software developed in this thesis as open source. We also explore some of the applications of mathematical expression recognition. In addition to the direct applications of transcription and digitization, we report two important proposals. First, we developed mucaptcha, a method to tell humans and computers apart by means of math handwriting input, which represents a novel application of math expression recognition. Second, we tackled the problem of layout analysis of structured documents using the statistical framework developed in this thesis, because both are two-dimensional problems that can be modeled with probabilistic grammars. The approach developed in this thesis for mathematical expression recognition has obtained good results at different levels. It has produced several scientific publications in international conferences and journals, and has been awarded in international competitions.[ES] La notación matemática es bien conocida y se utiliza en todo el mundo. La humanidad ha evolucionado desde simples métodos para representar cuentas hasta la notación formal actual capaz de modelar problemas complejos. Además, las expresiones matemáticas constituyen un idioma universal en el mundo científico, y se han creado muchos recursos que contienen matemáticas durante las últimas décadas. Sin embargo, para acceder de forma eficiente a toda esa información, los documentos científicos han de ser digitalizados o producidos directamente en formatos electrónicos. Aunque la mayoría de personas es capaz de entender y producir información matemática, introducir expresiones matemáticas en dispositivos electrónicos requiere aprender notaciones especiales o usar editores. El reconocimiento automático de expresiones matemáticas tiene como objetivo llenar ese espacio existente entre el conocimiento de una persona y la entrada que aceptan los ordenadores. De este modo, documentos impresos que contienen fórmulas podrían digitalizarse automáticamente, y la escritura se podría utilizar para introducir directamente notación matemática en dispositivos electrónicos. Esta tesis está centrada en desarrollar un método para reconocer expresiones matemáticas. En este documento proponemos un método para reconocer cualquier tipo de fórmula (impresa o manuscrita) basado en gramáticas probabilísticas. Para ello, desarrollamos el marco estadístico formal que deriva varias distribuciones de probabilidad. A lo largo del documento, abordamos la definición y estimación de todas estas fuentes de información probabilística. Finalmente, definimos el algoritmo que, dada cierta entrada, calcula globalmente la expresión matemática más probable de acuerdo al marco estadístico. Un aspecto importante de este trabajo es proporcionar una evaluación objetiva de los resultados y presentarlos usando datos públicos y medidas estándar. Por ello, estudiamos los problemas de la evaluación automática en este campo y buscamos las mejores soluciones. Asimismo, presentamos diversos experimentos usando bases de datos públicas y hemos participado en varias competiciones internacionales. Además, hemos publicado como código abierto la mayoría del software desarrollado en esta tesis. También hemos explorado algunas de las aplicaciones del reconocimiento de expresiones matemáticas. Además de las aplicaciones directas de transcripción y digitalización, presentamos dos propuestas importantes. En primer lugar, desarrollamos mucaptcha, un método para discriminar entre humanos y ordenadores mediante la escritura de expresiones matemáticas, el cual representa una novedosa aplicación del reconocimiento de fórmulas. En segundo lugar, abordamos el problema de detectar y segmentar la estructura de documentos utilizando el marco estadístico formal desarrollado en esta tesis, dado que ambos son problemas bidimensionales que pueden modelarse con gramáticas probabilísticas. El método desarrollado en esta tesis para reconocer expresiones matemáticas ha obtenido buenos resultados a diferentes niveles. Este trabajo ha producido varias publicaciones en conferencias internacionales y revistas, y ha sido premiado en competiciones internacionales.[CA] La notació matemàtica és ben coneguda i s'utilitza a tot el món. La humanitat ha evolucionat des de simples mètodes per representar comptes fins a la notació formal actual capaç de modelar problemes complexos. A més, les expressions matemàtiques constitueixen un idioma universal al món científic, i s'han creat molts recursos que contenen matemàtiques durant les últimes dècades. No obstant això, per accedir de forma eficient a tota aquesta informació, els documents científics han de ser digitalitzats o produïts directament en formats electrònics. Encara que la majoria de persones és capaç d'entendre i produir informació matemàtica, introduir expressions matemàtiques en dispositius electrònics requereix aprendre notacions especials o usar editors. El reconeixement automàtic d'expressions matemàtiques té per objectiu omplir aquest espai existent entre el coneixement d'una persona i l'entrada que accepten els ordinadors. D'aquesta manera, documents impresos que contenen fórmules podrien digitalitzar-se automàticament, i l'escriptura es podria utilitzar per introduir directament notació matemàtica en dispositius electrònics. Aquesta tesi està centrada en desenvolupar un mètode per reconèixer expressions matemàtiques. En aquest document proposem un mètode per reconèixer qualsevol tipus de fórmula (impresa o manuscrita) basat en gramàtiques probabilístiques. Amb aquesta finalitat, desenvolupem el marc estadístic formal que deriva diverses distribucions de probabilitat. Al llarg del document, abordem la definició i estimació de totes aquestes fonts d'informació probabilística. Finalment, definim l'algorisme que, donada certa entrada, calcula globalment l'expressió matemàtica més probable d'acord al marc estadístic. Un aspecte important d'aquest treball és proporcionar una avaluació objectiva dels resultats i presentar-los usant dades públiques i mesures estàndard. Per això, estudiem els problemes de l'avaluació automàtica en aquest camp i busquem les millors solucions. Així mateix, presentem diversos experiments usant bases de dades públiques i hem participat en diverses competicions internacionals. A més, hem publicat com a codi obert la majoria del software desenvolupat en aquesta tesi. També hem explorat algunes de les aplicacions del reconeixement d'expressions matemàtiques. A més de les aplicacions directes de transcripció i digitalització, presentem dues propostes importants. En primer lloc, desenvolupem mucaptcha, un mètode per discriminar entre humans i ordinadors mitjançant l'escriptura d'expressions matemàtiques, el qual representa una nova aplicació del reconeixement de fórmules. En segon lloc, abordem el problema de detectar i segmentar l'estructura de documents utilitzant el marc estadístic formal desenvolupat en aquesta tesi, donat que ambdós són problemes bidimensionals que poden modelar-se amb gramàtiques probabilístiques. El mètode desenvolupat en aquesta tesi per reconèixer expressions matemàtiques ha obtingut bons resultats a diferents nivells. Aquest treball ha produït diverses publicacions en conferències internacionals i revistes, i ha sigut premiat en competicions internacionals.Álvaro Muñoz, F. (2015). Mathematical Expression Recognition based on Probabilistic Grammars [Tesis doctoral no publicada]. Universitat Politècnica de València. https://doi.org/10.4995/Thesis/10251/51665TESI

Symbolic and Visual Retrieval of Mathematical Notation using Formula Graph Symbol Pair Matching and Structural Alignment

Large data collections containing millions of math formulae in different formats are available on-line. Retrieving math expressions from these collections is challenging. We propose a framework for retrieval of mathematical notation using symbol pairs extracted from visual and semantic representations of mathematical expressions on the symbolic domain for retrieval of text documents. We further adapt our model for retrieval of mathematical notation on images and lecture videos. Graph-based representations are used on each modality to describe math formulas. For symbolic formula retrieval, where the structure is known, we use symbol layout trees and operator trees. For image-based formula retrieval, since the structure is unknown we use a more general Line of Sight graph representation. Paths of these graphs define symbol pairs tuples that are used as the entries for our inverted index of mathematical notation. Our retrieval framework uses a three-stage approach with a fast selection of candidates as the first layer, a more detailed matching algorithm with similarity metric computation in the second stage, and finally when relevance assessments are available, we use an optional third layer with linear regression for estimation of relevance using multiple similarity scores for final re-ranking. Our model has been evaluated using large collections of documents, and preliminary results are presented for videos and cross-modal search. The proposed framework can be adapted for other domains like chemistry or technical diagrams where two visually similar elements from a collection are usually related to each other