Minimum cycle and homology bases of surface embedded graphs

We study the problems of finding a minimum cycle basis (a minimum weight set of cycles that form a basis for the cycle space) and a minimum homology basis (a minimum weight set of cycles that generates the $1$-dimensional ($\mathbb{Z}_2$)-homology classes) of an undirected graph embedded on a surface. The problems are closely related, because the minimum cycle basis of a graph contains its minimum homology basis, and the minimum homology basis of the $1$-skeleton of any graph is exactly its minimum cycle basis. For the minimum cycle basis problem, we give a deterministic $O(n^\omega+2^{2g}n^2+m)$-time algorithm for graphs embedded on an orientable surface of genus $g$. The best known existing algorithms for surface embedded graphs are those for general graphs: an $O(m^\omega)$ time Monte Carlo algorithm and a deterministic $O(nm^2/\log n + n^2 m)$ time algorithm. For the minimum homology basis problem, we give a deterministic $O((g+b)^3 n \log n + m)$-time algorithm for graphs embedded on an orientable or non-orientable surface of genus $g$ with $b$ boundary components, assuming shortest paths are unique, improving on existing algorithms for many values of $g$ and $n$. The assumption of unique shortest paths can be avoided with high probability using randomization or deterministically by increasing the running time of the homology basis algorithm by a factor of $O(\log n)$.Comment: A preliminary version of this work was presented at the 32nd Annual International Symposium on Computational Geometr

Dynamic Programming for Graphs on Surfaces

We provide a framework for the design and analysis of dynamic programming algorithms for surface-embedded graphs on n vertices and branchwidth at most k. Our technique applies to general families of problems where standard dynamic programming runs in 2^{O(k log k)} n steps. Our approach combines tools from topological graph theory and analytic combinatorics. In particular, we introduce a new type of branch decomposition called "surface cut decomposition", generalizing sphere cut decompositions of planar graphs introduced by Seymour and Thomas, which has nice combinatorial properties. Namely, the number of partial solutions that can be arranged on a surface cut decomposition can be upper-bounded by the number of non-crossing partitions on surfaces with boundary. It follows that partial solutions can be represented by a single-exponential (in the branchwidth k) number of configurations. This proves that, when applied on surface cut decompositions, dynamic programming runs in 2^{O(k)} n steps. That way, we considerably extend the class of problems that can be solved in running times with a single-exponential dependence on branchwidth and unify/improve most previous results in this direction.Comment: 28 pages, 3 figure

Periodic boundary conditions on the pseudosphere

We provide a framework to build periodic boundary conditions on the pseudosphere (or hyperbolic plane), the infinite two-dimensional Riemannian space of constant negative curvature. Starting from the common case of periodic boundary conditions in the Euclidean plane, we introduce all the needed mathematical notions and sketch a classification of periodic boundary conditions on the hyperbolic plane. We stress the possible applications in statistical mechanics for studying the bulk behavior of physical systems and we illustrate how to implement such periodic boundary conditions in two examples, the dynamics of particles on the pseudosphere and the study of classical spins on hyperbolic lattices.Comment: 30 pages, minor corrections, accepted to J. Phys.

The Parma Polyhedra Library: Toward a Complete Set of Numerical Abstractions for the Analysis and Verification of Hardware and Software Systems

Since its inception as a student project in 2001, initially just for the handling (as the name implies) of convex polyhedra, the Parma Polyhedra Library has been continuously improved and extended by joining scrupulous research on the theoretical foundations of (possibly non-convex) numerical abstractions to a total adherence to the best available practices in software development. Even though it is still not fully mature and functionally complete, the Parma Polyhedra Library already offers a combination of functionality, reliability, usability and performance that is not matched by similar, freely available libraries. In this paper, we present the main features of the current version of the library, emphasizing those that distinguish it from other similar libraries and those that are important for applications in the field of analysis and verification of hardware and software systems.Comment: 38 pages, 2 figures, 3 listings, 3 table

Beyond Node Degree: Evaluating AS Topology Models

This is the accepted version of 'Beyond Node Degree: Evaluating AS Topology Models', archived originally at arXiv:0807.2023v1 [cs.NI] 13 July 2008.Many models have been proposed to generate Internet Autonomous System (AS) topologies, most of which make structural assumptions about the AS graph. In this paper we compare AS topology generation models with several observed AS topologies. In contrast to most previous works, we avoid making assumptions about which topological properties are important to characterize the AS topology. Our analysis shows that, although matching degree-based properties, the existing AS topology generation models fail to capture the complexity of the local interconnection structure between ASs. Furthermore, we use BGP data from multiple vantage points to show that additional measurement locations significantly affect local structure properties, such as clustering and node centrality. Degree-based properties, however, are not notably affected by additional measurements locations. These observations are particularly valid in the core. The shortcomings of AS topology generation models stems from an underestimation of the complexity of the connectivity in the core caused by inappropriate use of BGP data