26,926 research outputs found
Distributed Correlation-Based Feature Selection in Spark
CFS (Correlation-Based Feature Selection) is an FS algorithm that has been
successfully applied to classification problems in many domains. We describe
Distributed CFS (DiCFS) as a completely redesigned, scalable, parallel and
distributed version of the CFS algorithm, capable of dealing with the large
volumes of data typical of big data applications. Two versions of the algorithm
were implemented and compared using the Apache Spark cluster computing model,
currently gaining popularity due to its much faster processing times than
Hadoop's MapReduce model. We tested our algorithms on four publicly available
datasets, each consisting of a large number of instances and two also
consisting of a large number of features. The results show that our algorithms
were superior in terms of both time-efficiency and scalability. In leveraging a
computer cluster, they were able to handle larger datasets than the
non-distributed WEKA version while maintaining the quality of the results,
i.e., exactly the same features were returned by our algorithms when compared
to the original algorithm available in WEKA.Comment: 25 pages, 5 figure
Feature selection in high-dimensional dataset using MapReduce
This paper describes a distributed MapReduce implementation of the minimum
Redundancy Maximum Relevance algorithm, a popular feature selection method in
bioinformatics and network inference problems. The proposed approach handles
both tall/narrow and wide/short datasets. We further provide an open source
implementation based on Hadoop/Spark, and illustrate its scalability on
datasets involving millions of observations or features
Scalable Solutions for Automated Single Pulse Identification and Classification in Radio Astronomy
Data collection for scientific applications is increasing exponentially and
is forecasted to soon reach peta- and exabyte scales. Applications which
process and analyze scientific data must be scalable and focus on execution
performance to keep pace. In the field of radio astronomy, in addition to
increasingly large datasets, tasks such as the identification of transient
radio signals from extrasolar sources are computationally expensive. We present
a scalable approach to radio pulsar detection written in Scala that
parallelizes candidate identification to take advantage of in-memory task
processing using Apache Spark on a YARN distributed system. Furthermore, we
introduce a novel automated multiclass supervised machine learning technique
that we combine with feature selection to reduce the time required for
candidate classification. Experimental testing on a Beowulf cluster with 15
data nodes shows that the parallel implementation of the identification
algorithm offers a speedup of up to 5X that of a similar multithreaded
implementation. Further, we show that the combination of automated multiclass
classification and feature selection speeds up the execution performance of the
RandomForest machine learning algorithm by an average of 54% with less than a
2% average reduction in the algorithm's ability to correctly classify pulsars.
The generalizability of these results is demonstrated by using two real-world
radio astronomy data sets.Comment: In Proceedings of the 47th International Conference on Parallel
Processing (ICPP 2018). ACM, New York, NY, USA, Article 11, 11 page
Decision Stream: Cultivating Deep Decision Trees
Various modifications of decision trees have been extensively used during the
past years due to their high efficiency and interpretability. Tree node
splitting based on relevant feature selection is a key step of decision tree
learning, at the same time being their major shortcoming: the recursive nodes
partitioning leads to geometric reduction of data quantity in the leaf nodes,
which causes an excessive model complexity and data overfitting. In this paper,
we present a novel architecture - a Decision Stream, - aimed to overcome this
problem. Instead of building a tree structure during the learning process, we
propose merging nodes from different branches based on their similarity that is
estimated with two-sample test statistics, which leads to generation of a deep
directed acyclic graph of decision rules that can consist of hundreds of
levels. To evaluate the proposed solution, we test it on several common machine
learning problems - credit scoring, twitter sentiment analysis, aircraft flight
control, MNIST and CIFAR image classification, synthetic data classification
and regression. Our experimental results reveal that the proposed approach
significantly outperforms the standard decision tree learning methods on both
regression and classification tasks, yielding a prediction error decrease up to
35%
Massively-Parallel Feature Selection for Big Data
We present the Parallel, Forward-Backward with Pruning (PFBP) algorithm for
feature selection (FS) in Big Data settings (high dimensionality and/or sample
size). To tackle the challenges of Big Data FS PFBP partitions the data matrix
both in terms of rows (samples, training examples) as well as columns
(features). By employing the concepts of -values of conditional independence
tests and meta-analysis techniques PFBP manages to rely only on computations
local to a partition while minimizing communication costs. Then, it employs
powerful and safe (asymptotically sound) heuristics to make early, approximate
decisions, such as Early Dropping of features from consideration in subsequent
iterations, Early Stopping of consideration of features within the same
iteration, or Early Return of the winner in each iteration. PFBP provides
asymptotic guarantees of optimality for data distributions faithfully
representable by a causal network (Bayesian network or maximal ancestral
graph). Our empirical analysis confirms a super-linear speedup of the algorithm
with increasing sample size, linear scalability with respect to the number of
features and processing cores, while dominating other competitive algorithms in
its class
Petuum: A New Platform for Distributed Machine Learning on Big Data
What is a systematic way to efficiently apply a wide spectrum of advanced ML
programs to industrial scale problems, using Big Models (up to 100s of billions
of parameters) on Big Data (up to terabytes or petabytes)? Modern
parallelization strategies employ fine-grained operations and scheduling beyond
the classic bulk-synchronous processing paradigm popularized by MapReduce, or
even specialized graph-based execution that relies on graph representations of
ML programs. The variety of approaches tends to pull systems and algorithms
design in different directions, and it remains difficult to find a universal
platform applicable to a wide range of ML programs at scale. We propose a
general-purpose framework that systematically addresses data- and
model-parallel challenges in large-scale ML, by observing that many ML programs
are fundamentally optimization-centric and admit error-tolerant,
iterative-convergent algorithmic solutions. This presents unique opportunities
for an integrative system design, such as bounded-error network synchronization
and dynamic scheduling based on ML program structure. We demonstrate the
efficacy of these system designs versus well-known implementations of modern ML
algorithms, allowing ML programs to run in much less time and at considerably
larger model sizes, even on modestly-sized compute clusters.Comment: 15 pages, 10 figures, final version in KDD 2015 under the same titl
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