3,758 research outputs found
Inverse Modeling for MEG/EEG data
We provide an overview of the state-of-the-art for mathematical methods that
are used to reconstruct brain activity from neurophysiological data. After a
brief introduction on the mathematics of the forward problem, we discuss
standard and recently proposed regularization methods, as well as Monte Carlo
techniques for Bayesian inference. We classify the inverse methods based on the
underlying source model, and discuss advantages and disadvantages. Finally we
describe an application to the pre-surgical evaluation of epileptic patients.Comment: 15 pages, 1 figur
A Unifying review of linear gaussian models
Factor analysis, principal component analysis, mixtures of gaussian clusters, vector quantization, Kalman filter models, and hidden Markov models can all be unified as variations of unsupervised learning under a single basic generative model. This is achieved by collecting together disparate observations and derivations made by many previous authors and introducing a new way of linking discrete and continuous state models using a simple nonlinearity. Through the use of other nonlinearities, we show how independent component analysis is also a variation of the same basic generative model.We show that factor analysis and mixtures of gaussians can be implemented in autoencoder neural networks and learned using squared error plus the same regularization term. We introduce a new model for static data, known as sensible principal component analysis, as well as a novel concept of spatially adaptive observation noise. We also review some of the literature involving global and local mixtures of the basic models and provide pseudocode for inference and learning for all the basic models
Ensemble Kalman methods for high-dimensional hierarchical dynamic space-time models
We propose a new class of filtering and smoothing methods for inference in
high-dimensional, nonlinear, non-Gaussian, spatio-temporal state-space models.
The main idea is to combine the ensemble Kalman filter and smoother, developed
in the geophysics literature, with state-space algorithms from the statistics
literature. Our algorithms address a variety of estimation scenarios, including
on-line and off-line state and parameter estimation. We take a Bayesian
perspective, for which the goal is to generate samples from the joint posterior
distribution of states and parameters. The key benefit of our approach is the
use of ensemble Kalman methods for dimension reduction, which allows inference
for high-dimensional state vectors. We compare our methods to existing ones,
including ensemble Kalman filters, particle filters, and particle MCMC. Using a
real data example of cloud motion and data simulated under a number of
nonlinear and non-Gaussian scenarios, we show that our approaches outperform
these existing methods
A Bayesian Consistent Dual Ensemble Kalman Filter for State-Parameter Estimation in Subsurface Hydrology
Ensemble Kalman filtering (EnKF) is an efficient approach to addressing
uncertainties in subsurface groundwater models. The EnKF sequentially
integrates field data into simulation models to obtain a better
characterization of the model's state and parameters. These are generally
estimated following joint and dual filtering strategies, in which, at each
assimilation cycle, a forecast step by the model is followed by an update step
with incoming observations. The Joint-EnKF directly updates the augmented
state-parameter vector while the Dual-EnKF employs two separate filters, first
estimating the parameters and then estimating the state based on the updated
parameters. In this paper, we reverse the order of the forecast-update steps
following the one-step-ahead (OSA) smoothing formulation of the Bayesian
filtering problem, based on which we propose a new dual EnKF scheme, the
Dual-EnKF. Compared to the Dual-EnKF, this introduces a new update
step to the state in a fully consistent Bayesian framework, which is shown to
enhance the performance of the dual filtering approach without any significant
increase in the computational cost. Numerical experiments are conducted with a
two-dimensional synthetic groundwater aquifer model to assess the performance
and robustness of the proposed Dual-EnKF, and to evaluate its
results against those of the Joint- and Dual-EnKFs. The proposed scheme is able
to successfully recover both the hydraulic head and the aquifer conductivity,
further providing reliable estimates of their uncertainties. Compared with the
standard Joint- and Dual-EnKFs, the proposed scheme is found more robust to
different assimilation settings, such as the spatial and temporal distribution
of the observations, and the level of noise in the data. Based on our
experimental setups, it yields up to 25% more accurate state and parameters
estimates
- …