Chlorophyll fluorescence induction method in assessing the efficiency of pre-sowing agro-technological construction of the oilseed radish (Raphanus sativus L. var. oleiformis Pers.) agrocenosis

Received: June 6th, 2022 ; Accepted: September 4th, 2022 ; Published: September 13th, 2022 ; Correspondence: [email protected], [email protected] fluorescence induction (CFI) is a measure of photosynthetic performance and is widely used by plant physiologists and ecophysiologists. The basic principle of CFI analysis is relatively straightforward. The specified method of analysis during 2015–2020 was applied to assess the optimality of selection of technological sowing parameters such as sowing rate (estimated interval 0.5–4.0 million germinable seeds ha-1 ), row width (15–30 cm), presowing fertilizer (N0–90P0–90K0–90) for three varieties of oilseed radish. The widely tested basic indicators of the CFI curve (F0, Fpl, Fm, Fst) were used, as well as possible indices and ratios calculated on their basis in accordance with the CFI analysis methodology. For the first time, the species characteristics of oilseed radish were investigated by the nature of the CFI curve in relation to spring rape, white mustard, and spring mustard on the 1.5 germinable seeds ha-1 (30 cm row width, N0P0K0) variant. It was established by the stress sensitivity category of the PSII photosystem that a reliable possibility of using the CFI method for identification studied technological options for sowing. The share of the influence of the technological factor of the sowing method (in %) on the formation of indicators F0, Fpl, Fm, Fst in the dispersion scheme of the experiment was consistently 19.3, 8.4, 19.5, 6.3. The influence of the seeding rate factor on the results of F0, Fpl, Fm, Fst was (in %) 26.6, 9.5, 42.3, 9.3 and the influence of the fertilizer factor was 13.5, 16.4, 5.7, 12.7, respectively. The formation of the specified basic indicators of the CFI curve in the resulting interaction of the technological parameters of sowing depended on the hydrothermal conditions of the vegetation of oilseed radish with the share of influence of 20.1, 40.2, 28.1, 30.0, respectively. It was determined that the decrease in the indicator of the hydrothermal coefficient (in the ratio of the increase in the sum of average daily temperatures to the decrease in the amount of precipitation) ensures the following dynamics of changes in the main and derivative indicators of CFI: a decrease Fpl 1.3%, Fm 11.8%, ER 8.7%, Lwp 15.9%, RFd 25.3%, Kprp 21.9%, Kfd 17.7% and growth F0 5.1%, Fst 7.3%, Que 40.4%, Kef 24.0%, Vt 71.3%. The comparison during the study period of options 4.0 and 0.5 million germinable seeds ha-1 determined an averaged decrease in F0 and Fst indicators by 29.5% and 29.1% while increasing Fpl and Fm by 2.2% and 38.5%. According to the determined level of CFI indicators for various technological schemes of sowing, an expedient option was recommended, which ensures the highest efficiency of the PSII photosystem of oilseed radish in the range of 1.0–2.0 germinable seeds ha-1 with a fertilization rate of N30–60P30–60K30–60 for row sowing and 1.5 germinable seeds ha-1 with a fertilization rate of N60–90P60–90K60–90 for wide-row sowing

Remote sensing of water leaks from rural aqueducts

The development of techniques for the detection of water leaks from underground pipelines is seen as a high profile activity by water companies and regulators. This is due to increasing water demands and problems with current leak detection methods. In this thesis optical reflectance and microwave backscatter were used to identify optimal indices for detecting water leaks amongst a variety of different land cover types at different growth stages. Ground-based surveys and modelling techniques were used to establish optimal wavelengths for detection. Results from these studies suggested that in the optical domain visible/middle infrared ratios show potential for leak detection for a wide range of leak types, under a variety of vegetation canopies at different growth stages. Given the sensitivity of L-band radar to moisture, and the ability to separate contributions from canopy and ground surface, it is possible to detect surface water beneath a range of vegetation canopies. The optimal leak detection indices were then used to idenitfy leaks on airborne image data. The available image data was L - band fully polarimetric E-SAR data, and 126 channel HYMAP hyperspectral airborne data which were acquired over an 8km section of the Vrynwy aqueduct (UK), which included a high concentration of leaks. Four of the five leaks were identifiable on the optical image data and none of the leaks were detectable on the microwave data. However the E-SAR data was obtained under unfavourable conditions. The results of both approaches are used to infer limits of detection in terms of season and meteorological conditions for a range of land covers. Preliminary findings suggest that leaks may be optimally detected when canopy height is low, surrounding soil is dry after a period of no rain, and the leak has been present for at least 2 days. The results from this work suggest that remote sensing is both an effective and feasible tool for leak identification

Hyperspectral and Thermal Remote Sensing of Plant Stress Reponses to Oil Pollution.

This study investigates the potential use of hyperspectral and thermal remote sensing for the early pre-visual detection and quantification of plant stress caused by oil pollution. Further, it examines the potential for these techniques to discriminate between oil pollution and two typically encountered plant stresses of waterlogging and water deficit. Results show that oil pollution, waterlogging and water deficit significantly decreased the physiological functions of plants and can result in pre-visual changes in spectral and thermal responses. Various spectral indices such as (R755-R716)/(R755+R716) and R800/R6O6 were efficient for the early detection of oil-induced stress in maize (up to 10 days earlier) and bean (up to 4 days earlier), respectively. These indices and other simple ratios of reflectance such as R673/R545 were also sensitive in the early detection (up to 6 days earlier) of stress symptoms caused by waterlogging in bean. The canopy absolute temperature and thermal index (IG) were good indicators of oil related stress in bean, but were insensitive to waterlogging. Absolute leaf temperature had minimal potential for detecting oil pollution in maize. While the spectral indices lacked ability for the early detection of stress caused by water deficit at the leaf scale in both maize and bean, absolute temperature was effective in this regard irrespective of scale of measurement. Results show that by combining spectral and thermal information, oil pollution can be discriminated from waterlogging or water deficit treatment. This study concludes that hyperspectral and thermal remote sensing have the potential to detect and quantify plant stress caused by oil pollution and it is possible to discriminate between this and other common stresses. However, further work is needed to refine and operationalise the approach, and the problems and challenges associated with this are presented and discussed

Implicación de genes de Pseudomonas simiae PICF7 en endofitismo, control biológico y promoción del crecimiento vegetal

The olive (Olea europaea L.) is the most emblematic tree in the Mediterranean basin, since 98% of its world´s cultivated area is found in this region. The morphological characteristics of this plant, its excellent adaptation to the typical dry and hot summers of this geographical area and the multiple uses of the cultivated and wild olive, make this tree of a huge economic, social and ecological importance. Spain leads the world´s production of olive oil and table olives. However, a/biotic factors such as the presence of pathogens and pests which are difficult to eradicate, erosion and soil loss, and the foreseeable effects of climate change are major threats to the crop. Currently, Verticillium wilt of olive (VWO), a disease caused by the hemibiotrophic fungus Verticillium dahliae Kleb. is considered one of the most devastating diseases affecting olive trees, and constitutes a limiting factor for the olive oil and table olives production. Moreover, recent studies have predicted an increase in temperature and prolonged periods of drought in the Mediterranean basin, which could lead to restrictions in the use of fresh water for irrigation, making it necessary to use saline or reclaimed water. To date, individual control measures employed against VWO have been ineffective. Consequently, integrated control methods combining preventive and palliative measures are considered the best strategy to manage the disease as well as to mitigate the spread of the causal pathogen. Within the integrated management strategy, biological control represents a sustainable and environmentally friendly approach and an alternative to the traditional chemical fungicides. Previous studies have demonstrated that Pseudomonas simiae PICF7 (formerly P. fluorescens PICF7), an indigenous inhabitant of olive roots, is an effective biological control agent (BCA) against VWO. In addition, its ability to promote growth in olive and barley, as well as in the model plant Arabidopsis thaliana, has been demonstrated. So far, strain PICF7 is perhaps the best characterized BCA against VWO. Nevertheless, the mechanisms involved in disease control and its endophytic root colonization ability in several hosts (i.e. olive, barley and wheat) remain largely unknown. Efforts to unravel the keys to the success of strain PICF7 as a BCA have even been made even by studying its interaction with other pathogens. So far, it has only been demonstrated the ability of strain PICF7 to induce systemic resistance to Botrytis cinerea in A. thaliana. Moreover, it is essential that PICF7 and V. dahliae share the same ecological niche (roots, rhizosphere) for the biocontrol of VWO, since an effective suppression of this pathogen has not been observed when both BCA and fungus are spatially separated ("split-root" system). Similarly, no disease control was observed when the phytopathogenic bacterium Pseudomonas savastanoi pv. savastanoi (causal agent of olive knot disease) and PICF7 were inoculated in different parts of the plant (BCA in the roots and pathogen in the stem). However, it was detected a transient reduction of the pathogen population and changes in the morphology of the associated tumors were detected when both microorganisms were applied to the same point (stem). Previous work has also shown that colonization of olive and banana roots by the strain PICF7 results in changes in the expression of genes involved in defensive responses, both locally (roots) and systemically (aerial part). Finally, it has been studied whether bacterial phenotypes traditionally associated with biological control and root colonization (e.g. siderophore production or motility) could be involved in VWO control. Interestingly, the results showed that PICF7 mutants altered in these phenotypes were not compromised in their ability to control the disease. In order to untangle the molecular and genetic bases underlying the effective biocontrol of VWO exerted by strain PICF7, as well as its ability to endophytically colonize olive roots, the present Thesis evaluated the possible contribution of three new phenotypes: 1) biofilm formation, which is traditionally associated with colonization and endophytism; 2) copper tolerance, a metal present in most commercial agricultural antifungals, which could contribute to greater adaptation and survival in soils; and 3) production of phytase, an enzyme involved in phosphorus mobilization and bioavailability, thus promoting plant growth. For this purpose, more than 5.500 Tn5-TcR (Tetracycline-resistance) insertion mutants (transposants) of a pre-existing random transposon insertion mutant bank were screened. Subsequently, for the identification of the Tn5-TcR insertion sites and, consequently, of the altered genes in the selected transposants, nested PCR was used. Finally, the mutants designated as Bfm8 and Bfm9 (unable to form biofilms), Cop1 and Cop33 (altered in copper tolerance) and Phy17 and Phy18 (deficient in phytase activity) were selected to carry out the olive root colonization and VWO biocontrol assays. By using confocal microscopy, it has been shown that all mutants affected in the aforementioned phenotypes were able to superficially colonize olive roots, although analysis of longitudinal sections of these roots revealed that mutants defective in biofilm formation (Bfm8 and Bfm9) did not colonize them internally. None of the studied phenotypes seemed to be involved in the biocontrol ability of PICF7 against VWO, since all selected mutants behaved similar to the wild-type strain PICF7, even though phytase defective mutants (Phy17 and Phy18) were impaired in their ability to antagonize V. dahliae in in vitro assays on one of the culture media used. This fact highlights the importance of contrasting in vitro observations with in planta assays, where the olive-Verticillium-BCA tripartite interaction becomes more complex. This is because there are numerous interactions with and among the remaining plant´s microbiota, as well as with several environmental and pedological factors. Pseudomonas sp. strain PICF6, another effective BCA against VWO, was included in some experiments performed in this Thesis for comparative purposes in order to accomplish some of the proposed objectives. In contrast to strain PICF7, there is virtually no information concerning the control of phytopathogens or the plant growth promotion capabilities of the beneficial strain PICF6, also originating from the olive rhizosphere. To overcome this lack of knowledge, both BCA and the Bfm and Phy mutants of PICF7, were tested in in vitro experiments against several pathogens of great agroeconomic importance in different crops. Strains PICF6 and PICF7, along with all selected mutants derived from the latter, only exhibited the ability to antagonize Verticillium longisporum ELV25, despite the inhibition rates of PICF7 mutants defective in phytase activity being significantly lower. The ability of these rhizobacteria to promote plant growth and colonize oilseed rape roots, host plant of V. longisporum, was also evaluated. Although none of the strains tested promoted the growth of this plant, belonging to the Brassicaceae family, all of them were able to colonize the root surface of oilseed rape seedlings. However, no evidence of endophytic colonization was found. Production of volatile organic compounds (VOC) has been described amongst the possible mechanisms by which beneficial microorganisms are able to inhibit the growth of phytopathogens or promote plant growth. A recent study has shown that strain PICF7 is able to promote plant growth of A. thaliana, not only through direct contact between the BCA and plant roots, but also through the emission of VOC without any physical contact. Nonetheless, it is unknown whether the ability of strains PICF6 and PICF7 to reduce V. dahliae growth could be attributed to this mechanism. In this context, the characterization of PICF6 and PICF7 volatilomes, as well as of the Bfm and Phy mutants, using Gas Chromatography-Mass Spectrometry (GC-MS), allowed the identification of several compounds described in the literature for their antimicrobial potential or plant growth-promoting activity. Conversely, in vitro VOC inhibition assays, using TCVA (Two Clamp VOC Assay) methodology, showed that none of the assayed strains were able to antagonize V. dahliae. Nevertheless, the compounds identified in the volatilome of these rhizobacteria, used individually and at a higher concentration, could represent a new avenue to explore substances with antagonistic capacity against V. dahliae and other relevant pathogens, as well as to evaluate their potential for plant growth promotion. As mentioned above, drought and salinity (abiotic stresses), along with to pathogen infections (biotic stresses), constitute another major threat to olive crop. Several microorganisms have shown high potential to reduce the effects of these stresses in plants. For this reason, the present Thesis has also been focused on studying the role of Pseudomonas sp. PICF6 and P. simiae PICF7 in the alleviation of the symptoms in plants caused by water scarcity of water or by salt accumulation in the soil. Numerous studies have attributed the beneficial effect of certain rhizobacteria on plants subjected to salt or drought stress to the production of the enzyme 1-aminocyclopropane-1-carboxylate (ACC) deaminase (ACD). These stresses induce the biosynthesis of ethylene (ET), a phytohormone that, among the numerous processes in which it is involved, causes a negative effect on the plant at high concentrations. ACD catalyzes the conversion of ACC, the immediate precursor of ET, into α-ketobutyrate and ammonia. Therefore, ACD-producing microorganisms contribute to reduce ET levels and, consequently, the stress caused by the accumulation of this phytohormone in the plant. Furthermore, the plant can also develop different defense strategies to mitigate the negative effects caused by this type of stress, including changes in stem water potential (Ψ) and stomatal conductance (gs), or in chlorophyll (Chl), flavonoid (Flv) or proline contents. Experiments were carried out to compare the physiological parameters mentioned above in plants inoculated with an ACD-producing rhizobacteria (Pseudomonas sp. PICF6) and in plants inoculated with a non ACD-producing rhizobacteria (P. simiae PICF7). The results obtained showed that, under the experimental conditions here used, Flv values were influenced by the presence of the bacteria. However, Ψ, gs and the Chl and proline contents remained unchanged upon inoculation of the different strains. Overall, the assayed rhizobacteria, regardless of whether or not they possess ACD activity, did not alleviate the stress produced by drought or salinity in olive plants under the experimental conditions. Finally, as a consequence of the work carried out in this section, it was also demonstrated that the colonization pattern of olive roots by Pseudomonas sp. PICF6 was similar to that observed for PICF7, including its endophytic capacity. In summary, the results obtained in this Thesis allow us to conclude that the three phenotypes of P. simiae PICF7 here examined (phytase activity, biofilm formation and copper tolerance) are not involved in the ability of this BCA to control VWO, although in the particular case of mutants altered in biofilm formation no evidence of endophytic colonization of olive roots was found. Therefore, VWO biocontrol by strain PICF7 does not seem to require inner colonization of this organ. Additinally, strains PICF6 and PICF7 did not show the ability to alleviate symptoms caused by salt or drought stress in olive plants, ruling out the involvement of the ACD activity, at least under the conditions analyzed. Colonization pattern studies for both strains showed that the two olive rhizobacteria superficially colonize the root of this model plant. However, neither PICF6 nor PICF7 promoted the growth of this plant. Yet, the characterization of PICF6 and PICF7 volatilomes allowed for the identification of several VOC with a reported antimicrobial activity. Even though the involvement of VOC in the inhibition of V. dahliae growth in vitro was not observed, the collected information could pave the way for further study of these molecules individually and against different pathogens.El olivo (Olea europaea L.) es el árbol más emblemático de la cuenca mediterránea, concentrándose en esta región el 98% de superficie cultivada de este árbol a nivel mundial. Las características morfológicas de esta planta, su excelente adaptación a los veranos secos y cálidos propios de esta área geográfica, además de los múltiples usos del olivo cultivado y silvestre, hacen que este posea una enorme importancia económica, social y ecológica. España lidera la producción mundial de aceite de oliva y aceituna de mesa. Sin embargo, factores a/bióticos como la presencia de patógenos y plagas de difícil erradicación, la erosión y pérdida de suelo o los previsibles efectos del cambio climático, suponen importantes amenazas para el cultivo. Enfermedades como la verticilosis del olivo (VO), causada por el hongo hemibiotrófico Verticillium dahliae Kleb. y considerada como una de las afecciones más devastadoras del olivo, constituyen un factor limitante para la producción de aceite de oliva y aceitunas de mesa. Asimismo, estudios recientes prevén un aumento de la temperatura y episodios prolongados de sequía en la cuenca mediterránea, lo que podría conducir a restricciones en el uso de agua dulce para irrigación, haciendo necesaria la utilización de agua salada o regenerada y comprometiendo la producción. En lo que respecta a la VO, los diferentes métodos de control de la enfermedad empleados de manera individual han sido ineficaces. Es por ello que el control integrado, combinando medidas preventivas y paliativas de diversa índole, se plantea como la mejor estrategia para manejar la enfermedad y mitigar la dispersión del patógeno que la provoca. Una de las medidas dentro de esta estrategia integrada es el control biológico, herramienta sostenible y respetuosa con el medio ambiente que surge como alternativa a los tradicionales fungicidas químicos. Estudios previos demostraron que Pseudomonas simiae PICF7 (anteriormente P. fluorescens PICF7), bacteria aislada de raíces de olivo (cultivar Picual), es un eficaz agente de control biológico (ACB) frente a la VO. Además, se ha comprobado su capacidad para promover el crecimiento en olivo y cebada, así como en la planta modelo Arabidopsis thaliana. La cepa PICF7 es quizás el ACB mejor caracterizado contra la VO, aunque los mecanismos implicados en el control de la enfermedad y en la capacidad de colonización endofítica de raíces en diversos huéspedes (olivo, cebada y trigo) continúan siendo bastante desconocidos. Las claves del éxito de la cepa PICF7 como ACB se han intentado desvelar incluso estudiando su interacción con otros patógenos. Hasta el momento solo se ha demostrado que induce resistencia sistémica frente a Botrytis cinerea en A. thaliana. Por otra parte, en el caso del control de la VO, es necesario que PICF7 y V. dahliae compartan el mismo nicho ecológico (raíces, rizosfera), pues no se ha observado un control efectivo de este patógeno cuando ACB y hongo se inoculan en raíces separadas en distintos compartimentos (sistema “split-root”). De igual manera, no se observó control cuando la bacteria fitopatógena Pseudomonas savastanoi pv. savastanoi (agente causal de la tuberculosis del olivo) y PICF7 se inoculaban en órganos diferentes de la planta (ACB en las raíces y patógeno en el tallo), pero sí se detectó una reducción transitoria de la población del patógeno y un cambio en la morfología de los tumores cuando ambos microorganismos eran aplicados en el mismo lugar (tallo). Trabajos anteriores también han demostrado que la colonización de las raíces de olivo y platanera por la cepa PICF7 desencadena cambios en la expresión de genes implicados en respuestas defensivas tanto a nivel local (raíces) como sistémico (parte aérea). Finalmente, se ha estudiado si fenotipos bacterianos tradicionalmente asociados con el control biológico y colonización de las raíces (p. ej., producción de sideróforos o motilidad) podían influir en el control de la VO, evidenciándose que mutantes de PICF7 alterados en estos fenotipos no veían mermada su capacidad para controlar la enfermedad. Con el objetivo de desentrañar las bases moleculares y genéticas que subyacen y explican el control efectivo de la VO ejercido por la cepa PICF7, así como su capacidad para colonizar endofíticamente raíces de olivo, en la presente Tesis se evaluó la posible contribución de tres nuevos fenotipos: 1) formación de biopelículas, fenotipo tradicionalmente asociado a colonización y endofitisimo; 2) tolerancia al cobre, metal presente en la mayoría de antifúngicos agrícolas comerciales, que podría contribuir a una mayor adaptación y supervivencia en suelos; y 3) producción de fitasa, enzima que ayuda a incrementar la movilización y disponibilidad del fósforo promoviendo el crecimiento vegetal. Para ello, se llevó a cabo el escrutinio de más de 5.500 mutantes procedentes de una mutateca preexistente generada mediante inserciones al azar del transposón Tn5-TcR, el cual confiere a los transposantes resistencia al antibiótico tetraciclina. Posteriormente, para la identificación de los lugares de inserción de Tn5-TcR y, consecuentemente, de los genes alterados en los transposantes seleccionados, se empleó la técnica de PCR anidada (“nested”-PCR). Finalmente, los mutantes denominados Bfm8 y Bfm9 (incapaces de formar biopelículas), Cop1 y Cop33 (alterados en tolerancia al cobre) y Phy17 y Phy18 (deficientes en actividad fitasa) se seleccionaron para llevar a cabo los ensayos de colonización de la raíz del olivo y biocontrol de la VO. En cuanto a colonización, el uso de microscopía confocal demostró que todos los mutantes afectados en los fenotipos mencionados fueron capaces de colonizar superficialmente las raíces de olivo, aunque el análisis de secciones longitudinales de dichas raíces reveló que los mutantes defectivos en formación de biopelículas (Bfm8 y Bfm9) no las colonizaron internamente. En lo que respecta a capacidad de biocontrol, ningún fenotipo pareció estar involucrado en esta habilidad, ya que todos los mutantes seleccionados controlaron la enfermedad al mismo nivel que la cepa parental PICF7, aun cuando los mutantes defectivos en actividad fitasa (Phy17 y Phy18) vieron mermada su capacidad de antagonizar V. dahliae in vitro en uno de los medios de cultivo empleados. Este hecho pone de manifiesto la crucial importancia de contrastar las observaciones efectuadas in vitro con los ensayos in planta, donde la interacción tripartita olivo-Verticillium-ACB se torna más compleja al entrar en juego las interacciones con y entre el resto de la microbiota de la planta, así como de diversos factores ambientales y pedológicos. La cepa Pseudomonas sp. PICF6, otro ACB eficaz frente a la VO, se incluyó en esta Tesis a efectos comparativos para abordar algunos de los objetivos planteados. Al contrario de lo que ocurre con PICF7, la información sobre esta bacteria beneficiosa originaria de la rizosfera de olivo en lo que respecta al control de fitopatógenos o a la promoción del crecimiento vegetal es prácticamente nula. Para soslayar esta deficiencia, ambos ACB, así como los mutantes Bfm y Phy de PICF7, se enfrentaron en experimentos in vitro a varios patógenos de gran importancia agroeconómica en diferentes cultivos. Las cepas PICF6 y PICF7, así como todos los mutantes derivados de esta última, sólo mostraron capacidad de antagonizar a Verticillium longisporum ELV25, aunque los índices de inhibición de los mutantes PICF7 defectivos en actividad fitasa fueron significativamente inferiores. También se evaluó la capacidad de estas rizobacterias de promover el crecimiento vegetal y de colonizar las raíces de colza, planta huésped de V. longisporum. Aunque ninguna de las cepas ensayadas promovió el crecimiento de esta brasicácea, todas fueron capaces de establecerse superficialmente sobre sus raíces. Sin embargo, no se encontró evidencia de colonización endófita. Entre los posibles mecanismos por los cuales microorganismos beneficiosos son capaces de inhibir el crecimiento de fitopatógenos o promover el crecimiento de las plantas se ha descrito la producción de compuestos orgánicos volátiles (COV). Un estudio reciente ha demostrado que la cepa PICF7 es capaz de promover el crecimiento vegetal de A. thaliana, no solo a través del contacto directo entre el ACB y las raíces de la planta, sino también a través de la emisión de COV sin mediar contacto físico. Sin embargo, se ignora si la capacidad de las cepas PICF6 y PICF7 para reducir el crecimiento de V. dahliae podría deberse a este mecanismo. La caracterización del volatiloma de las rizobacterias PICF6 y PICF7, así como de los mutantes Bfm y Phy de esta última, mediante el uso de Cromatografía de Gases-Espectrometría de Masas (GC-MS), permitió identificar numerosos compuestos descritos en la bibliografía por su potencial actividad antimicrobiana o promotora del crecimiento vegetal. Aun así, los ensayos de inhibición in vitro por COV, en los que se usó la metodología TCVA (de sus siglas en inglés “Two Clamp VOC Assay”), mostraron que ninguna de las cepas analizadas era capaz de antagonizar frente V. dahliae. A pesar de todo, los compuestos identificados en el volatiloma de estas rizobacterias, usados de forma individual y a una concentración mayor, podrían suponer una nueva vía para explorar sustancias con poder antagonista frente a V. dahliae y otros patógenos relevantes, así como para evaluar su potencial en la promoción del crecimiento de plantas. Como se menc

Field phenotyping and long-term platforms to characterise how crop genotypes interact with soil processes and the environment

Unsustainable agronomic practices and environmental change necessitate a revolution in agricultural production to ensure food security. A new generation of crops that yield more with fewer inputs and are adapted to more variable environments is needed. However, major changes in breeding programmes may be required to achieve this goal. By using the genetic variation in crop yield in specific target environments that vary in soil type, soil management, nutrient inputs and environmental stresses, robust traits suited to specific conditions can be identified. It is here that long-term experimental platforms and field phenotyping have an important role to play. In this review, we will provide information about some of the field-based platforms available and the cutting edge phenotyping systems at our disposal. We will also identify gaps in our field phenotyping resources that should be filled. We will go on to review the challenges in producing crop ideotypes for the dominant management systems for which we need sustainable solutions, and we discuss the potential impact of three-way interactions between genetics, environment and management. Finally, we will discuss the role that modelling can play in allowing us to fast-track some of these processes to allow us to make rapid gains in agricultural sustainability

Technological Eco-Innovations for the Quality Control and the Decontamination of Polluted Waters and Soils

The Special Issue “Technological Eco-Innovations for the Quality Control and the Decontamination of Polluted Waters and Soils” deals with the most recent research activities carried out at lab and field scale on eco-sustainable tools for the remediation of contaminated environmental substrates. It is particularly devoted to highlight the relevance of biological organisms (plants, microbes, algae) to assess the chemical contamination in water and soil and to remediate such matrices from the pollution caused by the human activities. Therefore, bioremediation is a primary focus of most of the articles published within the present Special Issue. Bioremediation is a promising environmentally friendly technology to deal with the chemical pollution in different ecosystem compartments and its integration with the traditional approaches might represent

Crop Disease Detection Using Remote Sensing Image Analysis

Pest and crop disease threats are often estimated by complex changes in crops and the applied agricultural practices that result mainly from the increasing food demand and climate change at global level. In an attempt to explore high-end and sustainable solutions for both pest and crop disease management, remote sensing technologies have been employed, taking advantages of possible changes deriving from relative alterations in the metabolic activity of infected crops which in turn are highly associated to crop spectral reflectance properties. Recent developments applied to high resolution data acquired with remote sensing tools, offer an additional tool which is the opportunity of mapping the infected field areas in the form of patchy land areas or those areas that are susceptible to diseases. This makes easier the discrimination between healthy and diseased crops, providing an additional tool to crop monitoring. The current book brings together recent research work comprising of innovative applications that involve novel remote sensing approaches and their applications oriented to crop disease detection. The book provides an in-depth view of the developments in remote sensing and explores its potential to assess health status in crops

Outputs: Potassium Losses from Agricultural Systems

Potassium (K) outputs comprise removals in harvested crops and losses via a number of pathways. No specific environmental issues arise from K losses to the wider environment, and so they have received little attention. Nevertheless, K is very soluble and so can be leached to depth or to surface waters. Also, because K is bound to clays and organic materials, and adsorbed K is mostly associated with fine soil particles, it can be eroded with particulate material in runoff water and by strong winds. It can also be lost when crop residues are burned in the open. Losses represent a potential economic cost to farmers and reduce soil nutritional status for plant growth. The pathways of loss and their relative importance can be related to: (a) the general characteristics of the agricultural ecosystem (tropical or temperate regions, cropping or grazing, tillage management, interactions with other nutrients such as nitrogen); (b) the specific characteristics of the agricultural ecosystem such as soil mineralogy, texture, initial soil K status, sources of K applied (organic, inorganic), and rates and timing of fertilizer applications. This chapter provides an overview of the main factors affecting K removals in crops and losses through runoff, leaching, erosion, and open burning