A deep learning framework for quality assessment and restoration in video endoscopy

Endoscopy is a routine imaging technique used for both diagnosis and minimally invasive surgical treatment. Artifacts such as motion blur, bubbles, specular reflections, floating objects and pixel saturation impede the visual interpretation and the automated analysis of endoscopy videos. Given the widespread use of endoscopy in different clinical applications, we contend that the robust and reliable identification of such artifacts and the automated restoration of corrupted video frames is a fundamental medical imaging problem. Existing state-of-the-art methods only deal with the detection and restoration of selected artifacts. However, typically endoscopy videos contain numerous artifacts which motivates to establish a comprehensive solution. We propose a fully automatic framework that can: 1) detect and classify six different primary artifacts, 2) provide a quality score for each frame and 3) restore mildly corrupted frames. To detect different artifacts our framework exploits fast multi-scale, single stage convolutional neural network detector. We introduce a quality metric to assess frame quality and predict image restoration success. Generative adversarial networks with carefully chosen regularization are finally used to restore corrupted frames. Our detector yields the highest mean average precision (mAP at 5% threshold) of 49.0 and the lowest computational time of 88 ms allowing for accurate real-time processing. Our restoration models for blind deblurring, saturation correction and inpainting demonstrate significant improvements over previous methods. On a set of 10 test videos we show that our approach preserves an average of 68.7% which is 25% more frames than that retained from the raw videos.Comment: 14 page

On Recognizing Transparent Objects in Domestic Environments Using Fusion of Multiple Sensor Modalities

Current object recognition methods fail on object sets that include both diffuse, reflective and transparent materials, although they are very common in domestic scenarios. We show that a combination of cues from multiple sensor modalities, including specular reflectance and unavailable depth information, allows us to capture a larger subset of household objects by extending a state of the art object recognition method. This leads to a significant increase in robustness of recognition over a larger set of commonly used objects.Comment: 12 page

Illuminant Estimation by Voting

Obtaining an estimate of the illuminant color is an important component in many image analysis applications. Due to the complexity of the problem many restrictive assumptions are commonly applied, making the existing illuminant estimation methodologies not widely applicable on natural images. We propose a methodology which analyzes a large number of regions in an image. An illuminant estimate is obtained independently from each region and a global illumination color is computed by consensus. Each region itself is mainly composed by pixels which simultaneously exhibit both diffuse and specular reflection. This allows for a larger inclusion of pixels than purely specularitybased methods, while avoiding, at the same time, some of the restrictive assumptions of purely diffuse-based approaches. As such, our technique is particularly well-suited for analyzing real-world images. Experiments with laboratory data show that our methodology outperforms 75 % of other illuminant estimation methods. On natural images, the algorithm is very stable and provides qualitatively correct estimates. 1

Depth Estimation for Glossy Surfaces with Light-Field Cameras

Abstract. Light-field cameras have now become available in both consumer and industrial applications, and recent papers have demonstrated practical algorithms for depth recovery from a passive single-shot capture. However, current light-field depth estimation methods are designed for Lambertian objects and fail or degrade for glossy or specular surfaces. Because light-field cameras have an array of micro-lenses, the captured data allows modification of both focus and perspec-tive viewpoints. In this paper, we develop an iterative approach to use the benefits of light-field data to estimate and remove the specular component, improving the depth estimation. The approach enables light-field data depth estimation to sup-port both specular and diffuse scenes. We present a physically-based method that estimates one or multiple light source colors. We show our method outperforms current state-of-the-art diffuse and specular separation and depth estimation al-gorithms in multiple real world scenarios.

Unsupervised Odometry and Depth Learning for Endoscopic Capsule Robots

In the last decade, many medical companies and research groups have tried to convert passive capsule endoscopes as an emerging and minimally invasive diagnostic technology into actively steerable endoscopic capsule robots which will provide more intuitive disease detection, targeted drug delivery and biopsy-like operations in the gastrointestinal(GI) tract. In this study, we introduce a fully unsupervised, real-time odometry and depth learner for monocular endoscopic capsule robots. We establish the supervision by warping view sequences and assigning the re-projection minimization to the loss function, which we adopt in multi-view pose estimation and single-view depth estimation network. Detailed quantitative and qualitative analyses of the proposed framework performed on non-rigidly deformable ex-vivo porcine stomach datasets proves the effectiveness of the method in terms of motion estimation and depth recovery.Comment: submitted to IROS 201

An Active Observer

In this paper we present a framework for research into the development of an Active Observer. The components of such an observer are the low and intermediate visual processing modules. Some of these modules have been adapted from the community and some have been investigated in the GRASP laboratory, most notably modules for the understanding of surface reflections via color and multiple views and for the segmentation of three dimensional images into first or second order surfaces via superquadric/parametric volumetric models. However the key problem in Active Observer research is the control structure of its behavior based on the task and situation. This control structure is modeled by a formalism called Discrete Events Dynamic Systems (DEDS)