Weighted Heuristic Ensemble of Filters

Feature selection has become increasingly important in data mining in recent years due to the rapid increase in the dimensionality of big data. However, the reliability and consistency of feature selection methods (filters) vary considerably on different data and no single filter performs consistently well under various conditions. Therefore, feature selection ensemble has been investigated recently to provide more reliable and effective results than any individual one but all the existing feature selection ensemble treat the feature selection methods equally regardless of their performance. In this paper, we present a novel framework which applies weighted feature selection ensemble through proposing a systemic way of adding different weights to the feature selection methods-filters. Also, we investigate how to determine the appropriate weight for each filter in an ensemble. Experiments based on ten benchmark datasets show that theoretically and intuitively adding more weight to ‘good filters’ should lead to better results but in reality it is very uncertain. This assumption was found to be correct for some examples in our experiment. However, for other situations, filters which had been assumed to perform well showed bad performance leading to even worse results. Therefore adding weight to filters might not achieve much in accuracy terms, in addition to increasing complexity, time consumption and clearly decreasing the stability

Informative Features for Model Comparison

Given two candidate models, and a set of target observations, we address the problem of measuring the relative goodness of fit of the two models. We propose two new statistical tests which are nonparametric, computationally efficient (runtime complexity is linear in the sample size), and interpretable. As a unique advantage, our tests can produce a set of examples (informative features) indicating the regions in the data domain where one model fits significantly better than the other. In a real-world problem of comparing GAN models, the test power of our new test matches that of the state-of-the-art test of relative goodness of fit, while being one order of magnitude faster.Comment: Accepted to NIPS 201

Rank Conditioned Rank Selection Filters for Signal Restoration

A class of nonlinear filters called rank conditioned rank selection (RCRS) filters is developed and analyzed in this paper. The RCRS filters are developed within the general framework of rank selection(RS) filters, which are filters constrained to output an order statistic from the observation set. Many previously proposed rank order based filters can be formulated as RS filters. The only difference between such filters is in the information used in deciding which order statistic to output. The information used by RCRS filters is the ranks of selected input samples, hence the name rank conditioned rank selection filters. The number of input sample ranks used is referred to as the order of the RCRS filter. The order can range from zero to the number of samples in the observation window, giving the filters valuable flexibility. Low-order filters can give good performance and are relatively simple to optimize and implement. If improved performance is demanded, the order can be increased but at the expense of filter simplicity. In this paper, many statistical and deterministic properties of the RCRS filters are presented. A procedure for optimizing over the class of RCRS filters is also presented. Finally, extensive computer simulation results that illustrate the performance of RCRS filters in comparison with other techniques in image restoration applications are presented

Progressive Neural Architecture Search

We propose a new method for learning the structure of convolutional neural networks (CNNs) that is more efficient than recent state-of-the-art methods based on reinforcement learning and evolutionary algorithms. Our approach uses a sequential model-based optimization (SMBO) strategy, in which we search for structures in order of increasing complexity, while simultaneously learning a surrogate model to guide the search through structure space. Direct comparison under the same search space shows that our method is up to 5 times more efficient than the RL method of Zoph et al. (2018) in terms of number of models evaluated, and 8 times faster in terms of total compute. The structures we discover in this way achieve state of the art classification accuracies on CIFAR-10 and ImageNet.Comment: To appear in ECCV 2018 as oral. The code and checkpoint for PNASNet-5 trained on ImageNet (both Mobile and Large) can now be downloaded from https://github.com/tensorflow/models/tree/master/research/slim#Pretrained. Also see https://github.com/chenxi116/PNASNet.TF for refactored and simplified TensorFlow code; see https://github.com/chenxi116/PNASNet.pytorch for exact conversion to PyTorc

A convolutional autoencoder approach for mining features in cellular electron cryo-tomograms and weakly supervised coarse segmentation

Cellular electron cryo-tomography enables the 3D visualization of cellular organization in the near-native state and at submolecular resolution. However, the contents of cellular tomograms are often complex, making it difficult to automatically isolate different in situ cellular components. In this paper, we propose a convolutional autoencoder-based unsupervised approach to provide a coarse grouping of 3D small subvolumes extracted from tomograms. We demonstrate that the autoencoder can be used for efficient and coarse characterization of features of macromolecular complexes and surfaces, such as membranes. In addition, the autoencoder can be used to detect non-cellular features related to sample preparation and data collection, such as carbon edges from the grid and tomogram boundaries. The autoencoder is also able to detect patterns that may indicate spatial interactions between cellular components. Furthermore, we demonstrate that our autoencoder can be used for weakly supervised semantic segmentation of cellular components, requiring a very small amount of manual annotation.Comment: Accepted by Journal of Structural Biolog

Enabling Explainable Fusion in Deep Learning with Fuzzy Integral Neural Networks

Information fusion is an essential part of numerous engineering systems and biological functions, e.g., human cognition. Fusion occurs at many levels, ranging from the low-level combination of signals to the high-level aggregation of heterogeneous decision-making processes. While the last decade has witnessed an explosion of research in deep learning, fusion in neural networks has not observed the same revolution. Specifically, most neural fusion approaches are ad hoc, are not understood, are distributed versus localized, and/or explainability is low (if present at all). Herein, we prove that the fuzzy Choquet integral (ChI), a powerful nonlinear aggregation function, can be represented as a multi-layer network, referred to hereafter as ChIMP. We also put forth an improved ChIMP (iChIMP) that leads to a stochastic gradient descent-based optimization in light of the exponential number of ChI inequality constraints. An additional benefit of ChIMP/iChIMP is that it enables eXplainable AI (XAI). Synthetic validation experiments are provided and iChIMP is applied to the fusion of a set of heterogeneous architecture deep models in remote sensing. We show an improvement in model accuracy and our previously established XAI indices shed light on the quality of our data, model, and its decisions.Comment: IEEE Transactions on Fuzzy System