Optimisation of distributed feedback laser biosensors

A new integrated optical sensor chip is proposed, based on a modified distributed- feedback (DFB) semiconductor laser. The semiconductor layers of different refractive indices that comprise a laser form the basis of a waveguide sensor, where changes in the refractive index of material at the surface are sensed via changes in the evanescent field of the lasing mode. In DFB lasers, laser oscillation occurs at the Bragg wavelength. Since this is sensitive to the effective refractive index of the optical mode, the emission wavelength is sensitive to the index of a sample on the waveguide surface. Hence, lasers are modelled as planar waveguides and the effective index of the fundamental transverse electric mode is calculated as a function of index and thickness of a thin surface layer using the beam propagation method. We find that an optimised structure has a thin upper cladding layer of ~0.15 mum, which according to this model gives detection limits on test layer index and thickness resolution of 0.1 and 1.57 nm, respectively, a figure which may be further improved using two lasers in an interferometer-type configuration

Distributed feedback lasers based on perylenediimide dyes for label-free refractive index sensing

The refractive index sensing capabilitity of distributed feedback (DFB) lasers based on highly photostable (under ambient conditions) perylenediimide-based active films, are reported. The sensor bulk sensitivity is determined from changes in the laser emission wavelength upon exposure to different liquids. The role of the active film thickness (hf) on the sensor sensitivity and on the laser parameters is studied. Sensors based on very thin films (hf = 160 nm) show the highest sensitivities, but their laser thresholds are relatively high and their operational durabilities moderate. The use of thicker films (hf = 850 nm) allows reducing the laser threshold and increasing the durability by two orders of magnitude. In this case, a higher sensitivity is achieved when the sensor operates at the wavelength corresponding to the first-order TE1 mode, instead of at the TE0 one. Finally, it is also shown that the inclusion of a high refractive index TiO2 layer on top of the sensor structure improves the sensitivity by around two times.This work was supported by the Spanish Government (MINECO) and the European Community (FEDER) through grant no. MAT-2011–28167-C02. This work was partially funded by the Basque Government within the framework of the Etortek Program (Grant No. IE13-360). M. Morales-Vidal has been partly supported by a MINECO FPI fellowship (no. BES-2009-020747)

Integrated optical sensors on the Si₃N₄-organic hybrid (SiNOH) platform

Ein wellenleiterbasierter Sensorchip wird demonstriert, der für Point-of-Care-Anwendungen geeignet ist. Der Biosensor wird mit Hilfe eines mathematischen Modells entworfen, mit dem die Sensitivität der Wellenleiter untersucht wird. Für die Lichteinkopplung in die Wellenleiter wird erstmalig eine neue Klasse von integrierten Laserquellen für sichtbare Wellenlängen untersucht. Die Funktionsfähigkeit des wellenleiterbasierten Biosensorchips durch Detektionsexperimente erfolgreich nachgewiesen

Lasing in Si₃N₄-organic hybrid (SiNOH) waveguides

Silicon nitride (Si$_{3}$N$_{4}$) waveguides offer low-loss wave propagation over a wide spectral range including visible wavelengths and lend themselves to photonic integrated circuits for bio-photonic applications. The Si$_{3}$N$_{4}$ device portfolio, however, is so far limited to passive devices that need to be fed by external light sources. This often requires delicate and costly fiber-chip coupling schemes that are subject to stringent alignment tolerances. In this paper, we present and investigate a class of lasers that combine Si$_{3}$N$_{4}$ waveguides with light-emitting organic cladding materials in a hybrid approach. These Si$_{3}$N$_{4}$-organic hybrid (SiNOH) lasers are operated by optical pumping from the top with low alignment precision. We theoretically and experimentally investigate different SiNOH laser concepts based on spiral-shaped ring resonators and distributed feedback (DFB) resonators. While our devices are designed for an emission wavelength of approximately 600 nm, the SiNOH laser concept can be transferred to a large range of wavelengths in the visible spectrum. The devices are amenable to cost-efficient mass production and have the potential to address a wide range of applications in bio-photonics and point-of-care diagnostics

Integrated dye lasers for all-polymer photonic Lab-on-a-Chip systems

Basierend auf integrierten Farbstofflasern wurden zwei optische Lab-on-a-Chip Systeme entwickelt. Zur effizienten Anregung von Fluoreszenzmarkern wurden optofluidische Farbstofflaser mit verteilter Rückkopplung (DFB Laser) untersucht. Für die markerfreie Moleküldetektion wurden Mikrokelchlaser entwickelt, die auf Flüstergaleriemoden basieren. Besonderes Augenmerk lag auf einer möglichen Großserienfertigung der Chips als kostengünstige Einwegartikel und auf einer einfachen Handhabung

Recent advances in biomedical photonic sensors: a focus on optical-fibre-based sensing

In this invited review, we provide an overview of the recent advances in biomedical pho tonic sensors within the last five years. This review is focused on works using optical-fibre technology, employing diverse optical fibres, sensing techniques, and configurations applied in several medical fields. We identified technical innovations and advancements with increased implementations of optical-fibre sensors, multiparameter sensors, and control systems in real applications. Examples of outstanding optical-fibre sensor performances for physical and biochemical parameters are covered, including diverse sensing strategies and fibre-optical probes for integration into medical instruments such as catheters, needles, or endoscopes.This work was supported by Ministerio de Ciencia e Innovación and Agencia Estatal de Investigación (PID2019-107270RB-C21/AEI/10.13039/501100011033), and TeDFeS Project (RTC-2017- 6321-1) co-funded by European FEDER funds. M.O. and J.F.A. received funding from Ministerio de Ciencia, Innovación y Universidades of Spain under Juan de la Cierva-Formación and Juan de la Cierva-Incorporación grants, respectively. P.R-V. received funding from Ministerio de Educación, Cultura y Deporte of Spain under PhD grant FPU2018/02797

Fiber bragg gratings for medical applications and future challenges: A review

In the last decades, fiber Bragg gratings (FBGs) have become increasingly attractive to medical applications due to their unique properties such as small size, biocompatibility, immunity to electromagnetic interferences, high sensitivity and multiplexing capability. FBGs have been employed in the development of surgical tools, assistive devices, wearables, and biosensors, showing great potentialities for medical uses. This paper reviews the FBG-based measuring systems, their principle of work, and their applications in medicine and healthcare. Particular attention is given to sensing solutions for biomechanics, minimally invasive surgery, physiological monitoring, and medical biosensing. Strengths, weaknesses, open challenges, and future trends are also discussed to highlight how FBGs can meet the demands of next-generation medical devices and healthcare system

Fiber Bragg Gratings for Medical Applications and Future Challenges: A Review

[EN] In the last decades, fiber Bragg gratings (FBGs) have become increasingly attractive to medical applications due to their unique properties such as small size, biocompatibility, immunity to electromagnetic interferences, high sensitivity and multiplexing capability. FBGs have been employed in the development of surgical tools, assistive devices, wearables, and biosensors, showing great potentialities for medical uses. This paper reviews the FBG-based measuring systems, their principle of work, and their applications in medicine and healthcare. Particular attention is given to sensing solutions for biomechanics, minimally invasive surgery, physiological monitoring, and medical biosensing. Strengths, weaknesses, open challenges, and future trends are also discussed to highlight how FBGs can meet the demands of next-generation medical devices and healthcare system.This work was supported in part by INAIL (the Italian National Institute for Insurance against Accident at Work), through the BRIC (Bando ricerche in collaborazione) 2018 SENSE-RISC (Sviluppo di abiti intelligENti Sensorizzati per prevenzione e mitigazione di Rischi per la SiCurezza dei lavoratori) Project under Grant ID10/2018, in part by the UCBM (Universita Campus Bio-Medico di Roma) under the University Strategic HOPE (HOspital to the PatiEnt) Project, in part by the EU Framework Program H2020-FETPROACT-2018-01 NeuHeart Project under Grant GA 824071, by FCT/MEC (Fundacao para a Ciencia e Tecnologia) under the Projects UIDB/50008/2020 - UIDP/50008/2020, and by REACT (Development of optical fiber solutions for Rehabilitation and e-Health applications) FCT-IT-LA scientific action.Lo Presti, D.; Massaroni, C.; Leitao, CSJ.; Domingues, MDF.; Sypabekova, M.; Barrera, D.; Floris, I.... (2020). Fiber Bragg Gratings for Medical Applications and Future Challenges: A Review. IEEE Access. 8:156863-156888. https://doi.org/10.1109/ACCESS.2020.3019138S156863156888

Towards label-free biosensing in compact disk technologies f or point-of-need analysis

Tesis por compendioThis thesis explores new analytical advances using compact disk biosensing technologies, and comprises six scientific publications distributed along four chapters. Special attention is herein payed to Thermochromic Etching Disks (TED) technology (Chapter 1), rational design of disk-based biorecognition assays (Chapter 2), and label-free detection systems for point-of-need analysis (Chapters 3 and 4). First, insights into a novel light-mediated signal developing system for biorecognition assays (based on TED disks and drives) are provided together with an overview of the state-of-the art and future trends in photo- and thermochromic biosensing. This signal developing approach exploits photo- and thermochromism for biosensing in an original manner and represents a potential strategy to simplify signaling processes in bioanalytical systems. Then, how to transform TED technology into lab-on-a-disk systems is addressed. TED has proven to be a very versatile tool to perform sensitive analysis of biorecognition assays, using platforms and scanners easily obtained from regular disks and drives, respectively. Biologically relevant assays of different nature (microarray, cell culture, immunofiltration, turbidimetry, etc.) have been arrayed in a single disk and sensitively analyzed by imaging. Regarding rational design, a theoretical-experimental method (INSEL) based on kinetics and mass-transport modelling for optimizing biorecognition assays and exploring their behavior is presented. INSEL has been implemented as an in silico tool that enables to characterize biointeractions with minimal experimentation, to perform optimizations directed towards custom objectives defined by the user, and to easily compute the effect of critical variables without further experiments. In another study included in this thesis, polycarbonate grooved structures obtained from standard recordable disks (CD-R and DVD-R) were coated with silver and tailored to become SERS-active. This strategy represents a cost-effective and industrially scalable alternative to the SERS substrates typically used for bioanalysis. These disk-based materials have presented tunable plasmonic responses, significant Raman enhancement, and have allowed complex biological targets (such as proteins and exosomes) to be analyzed by SERS without using labeled reagents as tracers. In addition to introduce inexpensive and large-scale SERS substrates for biosensing, this study also suggests the development of prospective Raman scanners based on disk drives. Another approach herein presented addresses the implementation of diffraction-based sensing (DBS) in TED technology in order to conceive disk-based label-free biosensors based on standard disks and drives. At first, a comprehensive experimental assessment of the analytical possibilities offered by DBS is presented. Then, the fabrication of arrays of diffractive protein networks on TED disks is investigated, with which sensitive analysis of antibodies in label-free conditions has been demonstrated, using adapted drives as scanners. This investigation provides important insights into cost-effective and industrially scalable functional materials and detection setups that exploit consumer electronics for label-free biosensing.Esta tesis explora nuevos avances en química analítica usando tecnologías de biosensado basadas en sistemas de disco compacto y comprende seis publicaciones científicas distribuidas a lo largo de cuatro capítulos. Los estudios se han centrado en la tecnología Thermochromic Etching Disks (TED) (Capítulo 1), el diseño racional de ensayos de bioreconocimiento en discos compactos (Capítulo 2), y la detección sin marcaje para realizar análisis in situ (Capítulos 3 y 4). Primero, enmarcado en una discusión del estado del arte y futuras tendencias en biosensado foto y termocrómico, se presenta un nuevo sistema (basado en discos y lectores TED) mediado por luz para el desarrollo de señales en ensayos de bioreconocimiento. Ésta constituye una estrategia novedosa para aprovechar el foto y termocromismo en biosensado, y presenta un gran potencial para simplificar los procesos de desarrollo de señal en sistemas bioanalíticos. A continuación, se aborda cómo transformar la tecnología TED en sistemas analíticos integrados basados en discos compactos. TED ha demostrado ser una herramienta muy versátil para analizar, de forma sensible, ensayos de bioreconocimiento usando plataformas y escáneres fácilmente obtenidos a partir de discos y lectores convencionales, respectivamente. Un único disco ha mostrado poder albergar varios ensayos biológicos importantes y de distinta naturaleza (micromatriz, cultivos celulares, inmunofiltración, turbidimetría, etc.), para ser analizados de forma sensible a través de imágenes En cuanto al diseño racional, se presenta un método teórico-experimental (INSEL), basado en modelos cinéticos y de transporte de masa, para optimizar ensayos de bioreconocimiento y explorar su comportamiento. INSEL se ha implementado como una herramienta in silico que permite caracterizar biointeracciones mediante mínima experimentación, realizar optimizaciones dirigidas a objetivos particulares definidos por el usuario, y computar el efecto de variables críticas de forma sencilla y sin experimentos adicionales. En otro estudio incluido en esta tesis, nanoestructuras en forma de surco obtenidas a partir de discos regrabables convencionales (CD-R y DVD-R) fueron recubiertas con plata y adaptadas para ser activas en SERS. Esta estrategia supone una alternativa, económicamente efectiva e industrialmente escalable, a los sustratos SERS típicamente usados en bioanálisis. Estos materiales han mostrado respuestas plasmónicas sintonizables, una amplificación Raman significativa, y han permitido analizar muestras biológicas complejas (como proteínas y exosomas) mediante SERS sin usar marcadores. Además de introducir sustratos SERS grandes y baratos, este trabajo también sugiere el desarrollo de escáneres Raman basados en lectores de disco. Otra aproximación presentada en esta tesis aborda la implementación de DBS (diffraction-based sensing) en tecnologías TED, con el fin de desarrollar biosensores para detección sin marcaje basados en discos y lectores convencionales. Primero, se presenta una amplia evaluación experimental de las posibilidades analíticas ofrecidas por DBS. A continuación, se investiga la fabricación de multitud de redes difractivas de proteínas sobre discos TED, con las que se ha demostrado la determinación sensible y sin marcaje de anticuerpos, usando lectores adaptados como escáneres analíticos. Esta investigación introduce avances importantes que apuntan al desarrollo de materiales funcionales y sistemas de detección, baratos e industrialmente escalables, que aprovechen las tecnologías de consumo para realizar biosensado sin marcaje.Aquesta tesi explora nous avanços en la química analítica usant tecnologies de biosensat basades en sistemes de disc compacte, i comprèn sis publicacions científiques distribuïdes en quatre capítols. Els estudis s'han centrat en la tecnologia Thermochromic Etching Disks (TED) (Capítol 1), el disseny racional d'assajos de bioreconeixement en discos compactes (Capítol 2), i la detecció sense marcatge per realitzar anàlisi in situ (Capítols 3 i 4). Primer, dins del marc d'una discussió de l'estat de l'art i tendències futures en biosensat foto i termocròmic, es presenta un nou sistema (basat en discos i lectors TED) per al desenvolupament de senyals mitjançant llum, en assajos de bioreconeixement. Aquesta constitueix una nova estratègia per aprofitar el foto i termocromisme en biosensat, mentre que també presenta una gran potencial per simplificar els processos de desenvolupament de senyal en sistemes bioanalítics. Tot seguit, s'aborda com transformar la tecnologia TED en sistemes analítics integrats basats en discos compactes. TED ha demostrat ser una eina molt versàtil per analitzar, de forma sensible, assajos de bioreconeixement usant plataformes i escàners fàcilment obtinguts a partir de discos i lectors convencionals, respectivament. Un únic disc ha mostrat poder albergar diversos assajos biològicament importants i de distinta naturalesa (micromatrius, cultius cel·lulars, immunofiltració, turbidimetria, etc.), per a ser analitzats de forma sensible a través d'imatges. Pel que fa al disseny racional, es presenta un mètode teòric-experimental (INSEL), basat en models cinètics i de transport de massa, per optimitzar assajos de bioreconeixement i explorar el seu comportament. INSEL s'ha implementat com a una eina in silico que permet caracteritzar biointeraccions amb mínima experimentació, realitzar optimitzacions dirigides cap a objectius particulars definits per l'usuari, i computar l'efecte de variables crítiques de forma senzilla i sense experiments addicionals. En un altre estudi inclòs en aquesta tesi, nanoestructures en forma de solc obtingudes a partir de discos compactes regravables convencionals (CD-R i DVD-R) van ser recobertes amb plata i adaptades per a ser actives en SERS. Aquesta estratègia suposa una alternativa, econòmicament efectiva i industrialment escalable, als substrats SERS típicament usats en bioanàlisi. Aquests materials han mostrat respostes plasmòniques sintonitzables, una amplificació Raman significativa, i han permès analitzar mostres biològiques complexes (com proteïnes i exosomes) mitjançant SERS sense usar marcadors. A més d'introduir substrats SERS grans i barats, aquest treball també suggereix el desenvolupament d'escàners Raman basats en lectors de disc. Una altra aproximació presentada en aquesta tesi aborda la implementació de DBS (diffraction-based sensing) en tecnologies TED, per tal de desenvolupar biosensors basats en discos i lectors convencionals que permeten detecció sense marcatge. Primer, es presenta una amplia avaluació experimental de les possibilitats analítiques que ofereix aquesta tècnica. A continuació, s'investiga la fabricació de multitud de xarxes difractives de proteïnes sobre discos TED, amb les quals s'ha demostrat la determinació sensible i sense marcatge d'anticossos, usant lectors adaptats com a escàners analítics. Aquesta investigació introdueix avanços importants que apunten cap al desenvolupament de materials funcionals i sistemes de detecció, barats i industrialment escalables, que aprofiten les tecnologies de consum per dur a terme bioanàlisi sense marcatge.Avellà Oliver, JM. (2017). Towards label-free biosensing in compact disk technologies f or point-of-need analysis [Tesis doctoral no publicada]. Universitat Politècnica de València. https://doi.org/10.4995/Thesis/10251/86128TESISCompendi