5,229 research outputs found

    Decomposition of sequential and concurrent models

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    Le macchine a stati finiti (FSM), sistemi di transizioni (TS) e le reti di Petri (PN) sono importanti modelli formali per la progettazione di sistemi. Un problema fodamentale è la conversione da un modello all'altro. Questa tesi esplora il mondo delle reti di Petri e della decomposizione di sistemi di transizioni. Per quanto riguarda la decomposizione dei sistemi di transizioni, la teoria delle regioni rappresenta la colonna portante dell'intero processo di decomposizione, mirato soprattutto a decomposizioni che utilizzano due sottoclassi delle reti di Petri: macchine a stati e reti di Petri a scelta libera. Nella tesi si dimostra che una proprietà chiamata ``chiusura rispetto all'eccitazione" (excitation-closure) è sufficiente per produrre un insieme di reti di Petri la cui sincronizzazione è bisimile al sistema di transizioni (o rete di Petri di partenza, se la decomposizione parte da una rete di Petri), dimostrando costruttivamente l'esistenza di una bisimulazione. Inoltre, è stato implementato un software che esegue la decomposizione dei sistemi di transizioni, per rafforzare i risultati teorici con dati sperimentali sistematici. Nella seconda parte della dissertazione si analizza un nuovo modello chiamato MSFSM, che rappresenta un insieme di FSM sincronizzate da due primitive specifiche (Wait State - Stato d'Attesa e Transition Barrier - Barriera di Transizione). Tale modello trova un utilizzo significativo nella sintesi di circuiti sincroni a partire da reti di Petri a scelta libera. In particolare vengono identificati degli errori nell'approccio originale, fornendo delle correzioni.Finite State Machines (FSMs), transition systems (TSs) and Petri nets (PNs) are important models of computation ubiquitous in formal methods for modeling systems. Important problems involve the transition from one model to another. This thesis explores Petri nets, transition systems and Finite State Machines decomposition and optimization. The first part addresses decomposition of transition systems and Petri nets, based on the theory of regions, representing them by means of restricted PNs, e.g., State Machines (SMs) and Free-choice Petri nets (FCPNs). We show that the property called ``excitation-closure" is sufficient to produce a set of synchronized Petri nets bisimilar to the original transition system or to the initial Petri net (if the decomposition starts from a PN), proving by construction the existence of a bisimulation. Furthermore, we implemented a software performing the decomposition of transition systems, and reported extensive experiments. The second part of the dissertation discusses Multiple Synchronized Finite State Machines (MSFSMs) specifying a set of FSMs synchronized by specific primitives: Wait State and Transition Barrier. It introduces a method for converting Petri nets into synchronous circuits using MSFSM, identifies errors in the initial approach, and provides corrections

    LIPIcs, Volume 251, ITCS 2023, Complete Volume

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    LIPIcs, Volume 251, ITCS 2023, Complete Volum

    Mapping the Focal Points of WordPress: A Software and Critical Code Analysis

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    Programming languages or code can be examined through numerous analytical lenses. This project is a critical analysis of WordPress, a prevalent web content management system, applying four modes of inquiry. The project draws on theoretical perspectives and areas of study in media, software, platforms, code, language, and power structures. The applied research is based on Critical Code Studies, an interdisciplinary field of study that holds the potential as a theoretical lens and methodological toolkit to understand computational code beyond its function. The project begins with a critical code analysis of WordPress, examining its origins and source code and mapping selected vulnerabilities. An examination of the influence of digital and computational thinking follows this. The work also explores the intersection of code patching and vulnerability management and how code shapes our sense of control, trust, and empathy, ultimately arguing that a rhetorical-cultural lens can be used to better understand code\u27s controlling influence. Recurring themes throughout these analyses and observations are the connections to power and vulnerability in WordPress\u27 code and how cultural, processual, rhetorical, and ethical implications can be expressed through its code, creating a particular worldview. Code\u27s emergent properties help illustrate how human values and practices (e.g., empathy, aesthetics, language, and trust) become encoded in software design and how people perceive the software through its worldview. These connected analyses reveal cultural, processual, and vulnerability focal points and the influence these entanglements have concerning WordPress as code, software, and platform. WordPress is a complex sociotechnical platform worthy of further study, as is the interdisciplinary merging of theoretical perspectives and disciplines to critically examine code. Ultimately, this project helps further enrich the field by introducing focal points in code, examining sociocultural phenomena within the code, and offering techniques to apply critical code methods

    Design of new algorithms for gene network reconstruction applied to in silico modeling of biomedical data

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    Programa de Doctorado en Biotecnología, Ingeniería y Tecnología QuímicaLínea de Investigación: Ingeniería, Ciencia de Datos y BioinformáticaClave Programa: DBICódigo Línea: 111The root causes of disease are still poorly understood. The success of current therapies is limited because persistent diseases are frequently treated based on their symptoms rather than the underlying cause of the disease. Therefore, biomedical research is experiencing a technology-driven shift to data-driven holistic approaches to better characterize the molecular mechanisms causing disease. Using omics data as an input, emerging disciplines like network biology attempt to model the relationships between biomolecules. To this effect, gene co- expression networks arise as a promising tool for deciphering the relationships between genes in large transcriptomic datasets. However, because of their low specificity and high false positive rate, they demonstrate a limited capacity to retrieve the disrupted mechanisms that lead to disease onset, progression, and maintenance. Within the context of statistical modeling, we dove deeper into the reconstruction of gene co-expression networks with the specific goal of discovering disease-specific features directly from expression data. Using ensemble techniques, which combine the results of various metrics, we were able to more precisely capture biologically significant relationships between genes. We were able to find de novo potential disease-specific features with the help of prior biological knowledge and the development of new network inference techniques. Through our different approaches, we analyzed large gene sets across multiple samples and used gene expression as a surrogate marker for the inherent biological processes, reconstructing robust gene co-expression networks that are simple to explore. By mining disease-specific gene co-expression networks we come up with a useful framework for identifying new omics-phenotype associations from conditional expression datasets.In this sense, understanding diseases from the perspective of biological network perturbations will improve personalized medicine, impacting rational biomarker discovery, patient stratification and drug design, and ultimately leading to more targeted therapies.Universidad Pablo de Olavide de Sevilla. Departamento de Deporte e Informátic

    2023-2024 Catalog

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    The 2023-2024 Governors State University Undergraduate and Graduate Catalog is a comprehensive listing of current information regarding:Degree RequirementsCourse OfferingsUndergraduate and Graduate Rules and Regulation

    Microcredentials to support PBL

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    Efficient Model Checking: The Power of Randomness

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    A Theistic Critique of Secular Moral Nonnaturalism

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    This dissertation is an exercise in Theistic moral apologetics. It will be developing both a critique of secular nonnaturalist moral theory (moral Platonism) at the level of metaethics, as well as a positive form of the moral argument for the existence of God that follows from this critique. The critique will focus on the work of five prominent metaethical theorists of secular moral non-naturalism: David Enoch, Eric Wielenberg, Russ Shafer-Landau, Michael Huemer, and Christopher Kulp. Each of these thinkers will be critically examined. Following this critique, the positive moral argument for the existence of God will be developed, combining a cumulative, abductive argument that follows from filling in the content of a succinct apagogic argument. The cumulative abductive argument and the apagogic argument together, with a transcendental and modal component, will be presented to make the case that Theism is the best explanation for the kind of moral, rational beings we are and the kind of universe in which we live, a rational intelligible universe

    Design and Real-World Evaluation of Dependable Wireless Cyber-Physical Systems

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    The ongoing effort for an efficient, sustainable, and automated interaction between humans, machines, and our environment will make cyber-physical systems (CPS) an integral part of the industry and our daily lives. At their core, CPS integrate computing elements, communication networks, and physical processes that are monitored and controlled through sensors and actuators. New and innovative applications become possible by extending or replacing static and expensive cable-based communication infrastructures with wireless technology. The flexibility of wireless CPS is a key enabler for many envisioned scenarios, such as intelligent factories, smart farming, personalized healthcare systems, autonomous search and rescue, and smart cities. High dependability, efficiency, and adaptivity requirements complement the demand for wireless and low-cost solutions in such applications. For instance, industrial and medical systems should work reliably and predictably with performance guarantees, even if parts of the system fail. Because emerging CPS will feature mobile and battery-driven devices that can execute various tasks, the systems must also quickly adapt to frequently changing conditions. Moreover, as applications become ever more sophisticated, featuring compact embedded devices that are deployed densely and at scale, efficient designs are indispensable to achieve desired operational lifetimes and satisfy high bandwidth demands. Meeting these partly conflicting requirements, however, is challenging due to imperfections of wireless communication and resource constraints along several dimensions, for example, computing, memory, and power constraints of the devices. More precisely, frequent and correlated message losses paired with very limited bandwidth and varying delays for the message exchange significantly complicate the control design. In addition, since communication ranges are limited, messages must be relayed over multiple hops to cover larger distances, such as an entire factory. Although the resulting mesh networks are more robust against interference, efficient communication is a major challenge as wireless imperfections get amplified, and significant coordination effort is needed, especially if the networks are dynamic. CPS combine various research disciplines, which are often investigated in isolation, ignoring their complex interaction. However, to address this interaction and build trust in the proposed solutions, evaluating CPS using real physical systems and wireless networks paired with formal guarantees of a system’s end-to-end behavior is necessary. Existing works that take this step can only satisfy a few of the abovementioned requirements. Most notably, multi-hop communication has only been used to control slow physical processes while providing no guarantees. One of the reasons is that the current communication protocols are not suited for dynamic multi-hop networks. This thesis closes the gap between existing works and the diverse needs of emerging wireless CPS. The contributions address different research directions and are split into two parts. In the first part, we specifically address the shortcomings of existing communication protocols and make the following contributions to provide a solid networking foundation: • We present Mixer, a communication primitive for the reliable many-to-all message exchange in dynamic wireless multi-hop networks. Mixer runs on resource-constrained low-power embedded devices and combines synchronous transmissions and network coding for a highly scalable and topology-agnostic message exchange. As a result, it supports mobile nodes and can serve any possible traffic patterns, for example, to efficiently realize distributed control, as required by emerging CPS applications. • We present Butler, a lightweight and distributed synchronization mechanism with formally guaranteed correctness properties to improve the dependability of synchronous transmissions-based protocols. These protocols require precise time synchronization provided by a specific node. Upon failure of this node, the entire network cannot communicate. Butler removes this single point of failure by quickly synchronizing all nodes in the network without affecting the protocols’ performance. In the second part, we focus on the challenges of integrating communication and various control concepts using classical time-triggered and modern event-based approaches. Based on the design, implementation, and evaluation of the proposed solutions using real systems and networks, we make the following contributions, which in many ways push the boundaries of previous approaches: • We are the first to demonstrate and evaluate fast feedback control over low-power wireless multi-hop networks. Essential for this achievement is a novel co-design and integration of communication and control. Our wireless embedded platform tames the imperfections impairing control, for example, message loss and varying delays, and considers the resulting key properties in the control design. Furthermore, the careful orchestration of control and communication tasks enables real-time operation and makes our system amenable to an end-to-end analysis. Due to this, we can provably guarantee closed-loop stability for physical processes with linear time-invariant dynamics. • We propose control-guided communication, a novel co-design for distributed self-triggered control over wireless multi-hop networks. Self-triggered control can save energy by transmitting data only when needed. However, there are no solutions that bring those savings to multi-hop networks and that can reallocate freed-up resources, for example, to other agents. Our control system informs the communication system of its transmission demands ahead of time so that communication resources can be allocated accordingly. Thus, we can transfer the energy savings from the control to the communication side and achieve an end-to-end benefit. • We present a novel co-design of distributed control and wireless communication that resolves overload situations in which the communication demand exceeds the available bandwidth. As systems scale up, featuring more agents and higher bandwidth demands, the available bandwidth will be quickly exceeded, resulting in overload. While event-triggered control and self-triggered control approaches reduce the communication demand on average, they cannot prevent that potentially all agents want to communicate simultaneously. We address this limitation by dynamically allocating the available bandwidth to the agents with the highest need. Thus, we can formally prove that our co-design guarantees closed-loop stability for physical systems with stochastic linear time-invariant dynamics.:Abstract Acknowledgements List of Abbreviations List of Figures List of Tables 1 Introduction 1.1 Motivation 1.2 Application Requirements 1.3 Challenges 1.4 State of the Art 1.5 Contributions and Road Map 2 Mixer: Efficient Many-to-All Broadcast in Dynamic Wireless Mesh Networks 2.1 Introduction 2.2 Overview 2.3 Design 2.4 Implementation 2.5 Evaluation 2.6 Discussion 2.7 Related Work 3 Butler: Increasing the Availability of Low-Power Wireless Communication Protocols 3.1 Introduction 3.2 Motivation and Background 3.3 Design 3.4 Analysis 3.5 Implementation 3.6 Evaluation 3.7 Related Work 4 Feedback Control Goes Wireless: Guaranteed Stability over Low-Power Multi-Hop Networks 4.1 Introduction 4.2 Related Work 4.3 Problem Setting and Approach 4.4 Wireless Embedded System Design 4.5 Control Design and Analysis 4.6 Experimental Evaluation 4.A Control Details 5 Control-Guided Communication: Efficient Resource Arbitration and Allocation in Multi-Hop Wireless Control Systems 5.1 Introduction 5.2 Problem Setting 5.3 Co-Design Approach 5.4 Wireless Communication System Design 5.5 Self-Triggered Control Design 5.6 Experimental Evaluation 6 Scaling Beyond Bandwidth Limitations: Wireless Control With Stability Guarantees Under Overload 6.1 Introduction 6.2 Problem and Related Work 6.3 Overview of Co-Design Approach 6.4 Predictive Triggering and Control System 6.5 Adaptive Communication System 6.6 Integration and Stability Analysis 6.7 Testbed Experiments 6.A Proof of Theorem 4 6.B Usage of the Network Bandwidth for Control 7 Conclusion and Outlook 7.1 Contributions 7.2 Future Directions Bibliography List of Publication
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