A survey on utilization of data mining approaches for dermatological (skin) diseases prediction

Due to recent technology advances, large volumes of medical data is obtained. These data contain valuable information. Therefore data mining techniques can be used to extract useful patterns. This paper is intended to introduce data mining and its various techniques and a survey of the available literature on medical data mining. We emphasize mainly on the application of data mining on skin diseases. A categorization has been provided based on the different data mining techniques. The utility of the various data mining methodologies is highlighted. Generally association mining is suitable for extracting rules. It has been used especially in cancer diagnosis. Classification is a robust method in medical mining. In this paper, we have summarized the different uses of classification in dermatology. It is one of the most important methods for diagnosis of erythemato-squamous diseases. There are different methods like Neural Networks, Genetic Algorithms and fuzzy classifiaction in this topic. Clustering is a useful method in medical images mining. The purpose of clustering techniques is to find a structure for the given data by finding similarities between data according to data characteristics. Clustering has some applications in dermatology. Besides introducing different mining methods, we have investigated some challenges which exist in mining skin data

Learning effective color features for content based image retrieval in dermatology

We investigate the extraction of effective color features for a content-based image retrieval (CBIR) application in dermatology. Effectiveness is measured by the rate of correct retrieval of images from four color classes of skin lesions. We employ and compare two different methods to learn favorable feature representations for this special application: limited rank matrix learning vector quantization (LiRaM LVQ) and a Large Margin Nearest Neighbor (LMNN) approach. Both methods use labeled training data and provide a discriminant linear transformation of the original features, potentially to a lower dimensional space. The extracted color features are used to retrieve images from a database by a k-nearest neighbor search. We perform a comparison of retrieval rates achieved with extracted and original features for eight different standard color spaces. We achieved significant improvements in every examined color space. The increase of the mean correct retrieval rate lies between 10% and 27% in the range of k=1–25 retrieved images, and the correct retrieval rate lies between 84% and 64%. We present explicit combinations of RGB and CIE-Lab color features corresponding to healthy and lesion skin. LiRaM LVQ and the computationally more expensive LMNN give comparable results for large values of the method parameter κ of LMNN (κ≥25) while LiRaM LVQ outperforms LMNN for smaller values of κ. We conclude that feature extraction by LiRaM LVQ leads to considerable improvement in color-based retrieval of dermatologic images

Supporting Skin Lesion Diagnosis with Content-Based Image Retrieval

In recent years, many attempts have been dedicated to the creation of automated devices that could assist both expert and beginner dermatologists towards fast and early diagnosis of skin lesions. Tasks such as skin lesion classification and segmentation have been extensively addressed with deep learning algorithms, which in some cases reach a diagnostic accuracy comparable to that of expert physicians. However, the general lack of interpretability and reliability severely hinders the ability of those approaches to actually support dermatologists in the diagnosis process. In this paper a novel skin image retrieval system is presented, which exploits features extracted by Convolutional Neural Networks to gather similar images from a publicly available dataset, in order to assist the diagnosis process of both expert and novice practitioners. In the proposed framework, ResNet-50 is initially trained for the classification of dermoscopic images; then, the feature extraction part is isolated, and an embedding network is built on top of it. The embedding learns an alternative representation, which allows to check image similarity by means of a distance measure. Experimental results reveal that the proposed method is able to select meaningful images, which can effectively boost the classification accuracy of human dermatologists

Semi-automated techniques for the retrieval of dermatological condition in color skin images

Dermatologists base the diagnosis of skin disease on the visual assessment of the skin. This fact shows that correct diagnosis is highly dependent on the observer\u27s experience and on his or her visual perception. Moreover, the human vision system lacks accuracy, reproducibility, and quantification in the way it gathers information from an image. So, there is a great need for computer-aided diagnosis. We propose a content-based image retrieval (CBIR) system to aid in the diagnosis of skin disease. First, after examining the skin images, pre-processing will be performed. Second, we examine the visual features for skin disease classified in the database and select color, texture and shape for characterization of a certain skin disease. Third, feature extraction techniques for each visual feature are investigated respectively. Fourth, similarity measures based on the extracted features will be discussed. Last, after discussing single feature performance, a distance metric combination scheme will be explored. The experimental data set is divided into two parts: developmental data set used as an image library and an unlabeled independent test data set. Two sets of experiments are performed: the input image of the skin image retrieval algorithm is either from developmental data set or independent test data set. The results are top five candidates of the input query image, that is, five labeled images from image library. Results are laid out separately for developmental data set and independent test data set. Two evaluation systems, both the standard precision vs. recall method, and the self-developed scoring method are carried out. The evaluation results obtained by both methods are given for each class of disease. Among all visual features, we found the color feature played a dominating role in distinguishing different types of skin disease. Among all classes of images, the class with best feature consistency gained the best retrieval accuracy based on the evaluation result. For future research we recommend further work in image collection protocol, color balancing, combining the feature metrics, improving texture characterization and incorporating semantic assistance in the retrieved process

Discovering a Domain Knowledge Representation for Image Grouping: Multimodal Data Modeling, Fusion, and Interactive Learning

In visually-oriented specialized medical domains such as dermatology and radiology, physicians explore interesting image cases from medical image repositories for comparative case studies to aid clinical diagnoses, educate medical trainees, and support medical research. However, general image classification and retrieval approaches fail in grouping medical images from the physicians\u27 viewpoint. This is because fully-automated learning techniques cannot yet bridge the gap between image features and domain-specific content for the absence of expert knowledge. Understanding how experts get information from medical images is therefore an important research topic. As a prior study, we conducted data elicitation experiments, where physicians were instructed to inspect each medical image towards a diagnosis while describing image content to a student seated nearby. Experts\u27 eye movements and their verbal descriptions of the image content were recorded to capture various aspects of expert image understanding. This dissertation aims at an intuitive approach to extracting expert knowledge, which is to find patterns in expert data elicited from image-based diagnoses. These patterns are useful to understand both the characteristics of the medical images and the experts\u27 cognitive reasoning processes. The transformation from the viewed raw image features to interpretation as domain-specific concepts requires experts\u27 domain knowledge and cognitive reasoning. This dissertation also approximates this transformation using a matrix factorization-based framework, which helps project multiple expert-derived data modalities to high-level abstractions. To combine additional expert interventions with computational processing capabilities, an interactive machine learning paradigm is developed to treat experts as an integral part of the learning process. Specifically, experts refine medical image groups presented by the learned model locally, to incrementally re-learn the model globally. This paradigm avoids the onerous expert annotations for model training, while aligning the learned model with experts\u27 sense-making

Comparative study on the performance of Au/F-TiO2 photocatalyst synthesized from Zamzam water and distilled water under blue light irradiation

Recurring problems of titanium dioxide (TiO2) for needing UV light to be activated and high electron-hole recombination rate limit the application of TiO2 as a prolific photocatalyst. By modifying the morphology and introducing electron trapping species into TiO2, the photocatalytic activity of TiO2 could be improved. Solvents of two different kinds; distilled water and Zamzam water were used in peroxotitanic acid synthesis of TiO2 and the photocatalyst was utilized to degrade Reactive Blue 19 (RB19) dye under blue light irradiation (475 nm) to assess the visible light activity of synthesized TiO2. Fluorine was incorporated to control the morphology while gold nanoparticles (GNP) stabilized by arabic gum were deposited to trap electrons. The morphology of F-TiO2 which appeared to be in ovoid shape was confirmed by Field Emission-Scanning Electron Microscope (FE-SEM) and Transmission Electron Microscope (TEM). Brunauer-Emmett-Teller (BET) surface area and crystallite size estimated from X-ray Diffraction (XRD) data revealed that F-TiO2 modified using HF was smaller in size and exhibited single anatase phase. The band gap of Au-TiO2 synthesized by distilled and Zamzam water was 2.78 eV and 2.89 eV respectively; shifted from 3.08 eV in blank TiO2. Peroxo Au/F-TiO2 synthesized with the incorporation of arabic gum as GNP stabilizer and HF as fluorine modifier degraded up to 49.23% of RB19 within two hours of reaction. The addition of fluorine and gold demonstrated high ability to enhance visible light activity of TiO2 with distilled water used as solvent displayed higher photocatalytic performance compared to Zamzam water

Passively mode-locked laser using an entirely centred erbium-doped fiber

This paper describes the setup and experimental results for an entirely centred erbium-doped fiber laser with passively mode-locked output. The gain medium of the ring laser cavity configuration comprises a 3 m length of two-core optical fiber, wherein an undoped outer core region of 9.38 μm diameter surrounds a 4.00 μm diameter central core region doped with erbium ions at 400 ppm concentration. The generated stable soliton mode-locking output has a central wavelength of 1533 nm and pulses that yield an average output power of 0.33 mW with a pulse energy of 31.8 pJ. The pulse duration is 0.7 ps and the measured output repetition rate of 10.37 MHz corresponds to a 96.4 ns pulse spacing in the pulse train

Towards an Effective Imaging-Based Decision Support System for Skin Cancer

The usage of expert systems to aid in medical decisions has been employed since 1980s in distinct ap plications. With the high demands of medical care and limited human resources, these technologies are required more than ever. Skin cancer has been one of the pathologies with higher growth, which suf fers from lack of dermatology experts in most of the affected geographical areas. A permanent record of examination that can be further analyzed are medical imaging modalities. Most of these modalities were also assessed along with machine learning classification methods. It is the aim of this research to provide background information about skin cancer types, medical imaging modalities, data mining and machine learning methods, and their application on skin cancer imaging, as well as the disclosure of a proposal of a multi-imaging modality decision support system for skin cancer diagnosis and treatment assessment based in the most recent available technology. This is expected to be a reference for further implementation of imaging-based clinical support systems.info:eu-repo/semantics/publishedVersio