3,104 research outputs found
Achieving High Speed CFD simulations: Optimization, Parallelization, and FPGA Acceleration for the unstructured DLR TAU Code
Today, large scale parallel simulations are fundamental tools to handle complex problems. The number of processors in current computation platforms has been recently increased and therefore it is necessary to optimize the application performance and to enhance the scalability of massively-parallel systems. In addition, new heterogeneous architectures, combining conventional processors with specific hardware, like FPGAs, to accelerate the most time consuming functions are considered as a strong alternative to boost the performance.
In this paper, the performance of the DLR TAU code is analyzed and optimized. The improvement of the code efficiency is addressed through three key activities: Optimization, parallelization and hardware acceleration. At first, a profiling analysis of the most time-consuming processes of the Reynolds Averaged Navier Stokes flow solver on a three-dimensional unstructured mesh is performed. Then, a study of the code scalability with new partitioning algorithms are tested to show the most suitable partitioning algorithms for the selected applications. Finally, a feasibility study on the application of FPGAs and GPUs for the hardware acceleration of CFD simulations is presented
Revisiting Actor Programming in C++
The actor model of computation has gained significant popularity over the
last decade. Its high level of abstraction makes it appealing for concurrent
applications in parallel and distributed systems. However, designing a
real-world actor framework that subsumes full scalability, strong reliability,
and high resource efficiency requires many conceptual and algorithmic additives
to the original model.
In this paper, we report on designing and building CAF, the "C++ Actor
Framework". CAF targets at providing a concurrent and distributed native
environment for scaling up to very large, high-performance applications, and
equally well down to small constrained systems. We present the key
specifications and design concepts---in particular a message-transparent
architecture, type-safe message interfaces, and pattern matching
facilities---that make native actors a viable approach for many robust,
elastic, and highly distributed developments. We demonstrate the feasibility of
CAF in three scenarios: first for elastic, upscaling environments, second for
including heterogeneous hardware like GPGPUs, and third for distributed runtime
systems. Extensive performance evaluations indicate ideal runtime behaviour for
up to 64 cores at very low memory footprint, or in the presence of GPUs. In
these tests, CAF continuously outperforms the competing actor environments
Erlang, Charm++, SalsaLite, Scala, ActorFoundry, and even the OpenMPI.Comment: 33 page
Unleashing Fine-Grained Parallelism on Embedded Many-Core Accelerators with Lightweight OpenMP Tasking
In recent years, programmable many-core accelerators (PMCAs) have been introduced in embedded systems to satisfy stringent performance/Watt requirements. This has increased the urge for programming models capable of effectively leveraging hundreds to thousands of processors. Task-based parallelism has the potential to provide such capabilities, offering high-level abstractions to outline abundant and irregular parallelism in embedded applications. However, efficiently supporting this programming paradigm on embedded PMCAs is challenging, due to the large time and space overheads it introduces. In this paper we describe a lightweight OpenMP tasking runtime environment (RTE) design for a state-of-the-art embedded PMCA, the Kalray MPPA 256. We provide an exhaustive characterization of the costs of our RTE, considering both synthetic workload and real programs, and we compare to several other tasking RTEs. Experimental results confirm that our solution achieves near-ideal parallelization speedups for tasks as small as 5K cycles, and an average speedup of 12 × for real benchmarks, which is 60% higher than what we observe with the original Kalray OpenMP implementation
Roadmap on Electronic Structure Codes in the Exascale Era
Electronic structure calculations have been instrumental in providing many
important insights into a range of physical and chemical properties of various
molecular and solid-state systems. Their importance to various fields,
including materials science, chemical sciences, computational chemistry and
device physics, is underscored by the large fraction of available public
supercomputing resources devoted to these calculations. As we enter the
exascale era, exciting new opportunities to increase simulation numbers, sizes,
and accuracies present themselves. In order to realize these promises, the
community of electronic structure software developers will however first have
to tackle a number of challenges pertaining to the efficient use of new
architectures that will rely heavily on massive parallelism and hardware
accelerators. This roadmap provides a broad overview of the state-of-the-art in
electronic structure calculations and of the various new directions being
pursued by the community. It covers 14 electronic structure codes, presenting
their current status, their development priorities over the next five years,
and their plans towards tackling the challenges and leveraging the
opportunities presented by the advent of exascale computing.Comment: Submitted as a roadmap article to Modelling and Simulation in
Materials Science and Engineering; Address any correspondence to Vikram
Gavini ([email protected]) and Danny Perez ([email protected]
Roadmap on Electronic Structure Codes in the Exascale Era
Electronic structure calculations have been instrumental in providing many important insights into a range of physical and chemical properties of various molecular and solid-state systems. Their importance to various fields, including materials science, chemical sciences, computational chemistry and device physics, is underscored by the large fraction of available public supercomputing resources devoted to these calculations. As we enter the exascale era, exciting new opportunities to increase simulation numbers, sizes, and accuracies present themselves. In order to realize these promises, the community of electronic structure software developers will however first have to tackle a number of challenges pertaining to the efficient use of new architectures that will rely heavily on massive parallelism and hardware accelerators. This roadmap provides a broad overview of the state-of-the-art in electronic structure calculations and of the various new directions being pursued by the community. It covers 14 electronic structure codes, presenting their current status, their development priorities over the next five years, and their plans towards tackling the challenges and leveraging the opportunities presented by the advent of exascale computing
Integrative Dynamic Reconfiguration in a Parallel Stream Processing Engine
Load balancing, operator instance collocations and horizontal scaling are
critical issues in Parallel Stream Processing Engines to achieve low data
processing latency, optimized cluster utilization and minimized communication
cost respectively. In previous work, these issues are typically tackled
separately and independently. We argue that these problems are tightly coupled
in the sense that they all need to determine the allocations of workloads and
migrate computational states at runtime. Optimizing them independently would
result in suboptimal solutions. Therefore, in this paper, we investigate how
these three issues can be modeled as one integrated optimization problem. In
particular, we first consider jobs where workload allocations have little
effect on the communication cost, and model the problem of load balance as a
Mixed-Integer Linear Program. Afterwards, we present an extended solution
called ALBIC, which support general jobs. We implement the proposed techniques
on top of Apache Storm, an open-source Parallel Stream Processing Engine. The
extensive experimental results over both synthetic and real datasets show that
our techniques clearly outperform existing approaches
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