Adaptive transfer functions: improved multiresolution visualization of medical models

The final publication is available at Springer via http://dx.doi.org/10.1007/s00371-016-1253-9Medical datasets are continuously increasing in size. Although larger models may be available for certain research purposes, in the common clinical practice the models are usually of up to 512x512x2000 voxels. These resolutions exceed the capabilities of conventional GPUs, the ones usually found in the medical doctors’ desktop PCs. Commercial solutions typically reduce the data by downsampling the dataset iteratively until it fits the available target specifications. The data loss reduces the visualization quality and this is not commonly compensated with other actions that might alleviate its effects. In this paper, we propose adaptive transfer functions, an algorithm that improves the transfer function in downsampled multiresolution models so that the quality of renderings is highly improved. The technique is simple and lightweight, and it is suitable, not only to visualize huge models that would not fit in a GPU, but also to render not-so-large models in mobile GPUs, which are less capable than their desktop counterparts. Moreover, it can also be used to accelerate rendering frame rates using lower levels of the multiresolution hierarchy while still maintaining high-quality results in a focus and context approach. We also show an evaluation of these results based on perceptual metrics.Peer ReviewedPostprint (author's final draft

Locally Adaptive Resolution (LAR) codec

The JPEG committee has initiated a study of potential technologies dedicated to future generation image compression systems. The idea is to design a new norm of image compression, named JPEG AIC (Advanced Image Coding), together with advanced evaluation methodologies, closely matching to human vision system characteristics. JPEG AIC thus aimed at defining a complete coding system able to address advanced functionalities such as lossy to lossless compression, scalability (spatial, temporal, depth, quality, complexity, component, granularity...), robustness, embed-ability, content description for image handling at object level... The chosen compression method would have to fit perceptual metrics defined by the JPEG community within the JPEG AIC project. In this context, we propose the Locally Adaptive Resolution (LAR) codec as a contribution to the relative call for technologies, tending to fit all of previous functionalities. This method is a coding solution that simultaneously proposes a relevant representation of the image. This property is exploited through various complementary coding schemes in order to design a highly scalable encoder. The LAR method has been initially introduced for lossy image coding. This efficient image compression solution relies on a content-based system driven by a specific quadtree representation, based on the assumption that an image can be represented as layers of basic information and local texture. Multiresolution versions of this codec have shown their efficiency, from low bit rates up to lossless compressed images. An original hierarchical self-extracting region representation has also been elaborated: a segmentation process is realized at both coder and decoder, leading to a free segmentation map. This later can be further exploited for color region encoding, image handling at region level. Moreover, the inherent structure of the LAR codec can be used for advanced functionalities such as content securization purposes. In particular, dedicated Unequal Error Protection systems have been produced and tested for transmission over the Internet or wireless channels. Hierarchical selective encryption techniques have been adapted to our coding scheme. Data hiding system based on the LAR multiresolution description allows efficient content protection. Thanks to the modularity of our coding scheme, complexity can be adjusted to address various embedded systems. For example, basic version of the LAR coder has been implemented onto FPGA platform while respecting real-time constraints. Pyramidal LAR solution and hierarchical segmentation process have also been prototyped on DSPs heterogeneous architectures. This chapter first introduces JPEG AIC scope and details associated requirements. Then we develop the technical features, of the LAR system, and show the originality of the proposed scheme, both in terms of functionalities and services. In particular, we show that the LAR coder remains efficient for natural images, medical images, and art images