Learning Deep NBNN Representations for Robust Place Categorization

This paper presents an approach for semantic place categorization using data obtained from RGB cameras. Previous studies on visual place recognition and classification have shown that, by considering features derived from pre-trained Convolutional Neural Networks (CNNs) in combination with part-based classification models, high recognition accuracy can be achieved, even in presence of occlusions and severe viewpoint changes. Inspired by these works, we propose to exploit local deep representations, representing images as set of regions applying a Na\"{i}ve Bayes Nearest Neighbor (NBNN) model for image classification. As opposed to previous methods where CNNs are merely used as feature extractors, our approach seamlessly integrates the NBNN model into a fully-convolutional neural network. Experimental results show that the proposed algorithm outperforms previous methods based on pre-trained CNN models and that, when employed in challenging robot place recognition tasks, it is robust to occlusions, environmental and sensor changes

Medical image modality classification using discrete Bayesian Networks

In this paper we propose a complete pipeline for medical image modality classification focused on the application of discrete Bayesian network classifiers. Modality refers to the categorization of biomedical images from the literature according to a previously defined set of image types, such as X-ray, graph or gene sequence. We describe an extensive pipeline starting with feature extraction from images, data combination, pre-processing and a range of different classification techniques and models. We study the expressive power of several image descriptors along with supervised discretization and feature selection to show the performance of discrete Bayesian networks compared to the usual deterministic classifiers used in image classification. We perform an exhaustive experimentation by using the ImageCLEFmed 2013 collection. This problem presents a high number of classes so we propose several hierarchical approaches. In a first set of experiments we evaluate a wide range of parameters for our pipeline along with several classification models. Finally, we perform a comparison by setting up the competition environment between our selected approaches and the best ones of the original competition. Results show that the Bayesian Network classifiers obtain very competitive results. Furthermore, the proposed approach is stable and it can be applied to other problems that present inherent hierarchical structures of classes

Learning to Select Pre-Trained Deep Representations with Bayesian Evidence Framework

We propose a Bayesian evidence framework to facilitate transfer learning from pre-trained deep convolutional neural networks (CNNs). Our framework is formulated on top of a least squares SVM (LS-SVM) classifier, which is simple and fast in both training and testing, and achieves competitive performance in practice. The regularization parameters in LS-SVM is estimated automatically without grid search and cross-validation by maximizing evidence, which is a useful measure to select the best performing CNN out of multiple candidates for transfer learning; the evidence is optimized efficiently by employing Aitken's delta-squared process, which accelerates convergence of fixed point update. The proposed Bayesian evidence framework also provides a good solution to identify the best ensemble of heterogeneous CNNs through a greedy algorithm. Our Bayesian evidence framework for transfer learning is tested on 12 visual recognition datasets and illustrates the state-of-the-art performance consistently in terms of prediction accuracy and modeling efficiency.Comment: Appearing in CVPR-2016 (oral presentation

A method for probabilistic mapping between protein structure and function taxonomies through cross training

<p>Abstract</p> <p>Background</p> <p>Prediction of function of proteins on the basis of structure and vice versa is a partially solved problem, largely in the domain of biophysics and biochemistry. This underlies the need of computational and bioinformatics approach to solve the problem. Large and organized latent knowledge on protein classification exists in the form of independently created protein classification databases. By creating probabilistic maps between classes of structural classification databases (e.g. SCOP <abbrgrp><abbr bid="B1">1</abbr></abbrgrp>) and classes of functional classification databases (e.g. PROSITE <abbrgrp><abbr bid="B2">2</abbr></abbrgrp>), structure and function of proteins could be probabilistically related.</p> <p>Results</p> <p>We demonstrate that PROSITE and SCOP have significant semantic overlap, in spite of independent classification schemes. By training classifiers of SCOP using classes of PROSITE as attributes and vice versa, accuracy of Support Vector Machine classifiers for both SCOP and PROSITE was improved. Novel attributes, 2-D elastic profiles and Blocks were used to improve time complexity and accuracy. Many relationships were extracted between classes of SCOP and PROSITE using decision trees.</p> <p>Conclusion</p> <p>We demonstrate that presented approach can discover new probabilistic relationships between classes of different taxonomies and render a more accurate classification. Extensive mappings between existing protein classification databases can be created to link the large amount of organized data. Probabilistic maps were created between classes of SCOP and PROSITE allowing predictions of structure using function, and vice versa. In our experiments, we also found that functions are indeed more strongly related to structure than are structure to functions.</p

Object detection via a multi-region & semantic segmentation-aware CNN model

We propose an object detection system that relies on a multi-region deep convolutional neural network (CNN) that also encodes semantic segmentation-aware features. The resulting CNN-based representation aims at capturing a diverse set of discriminative appearance factors and exhibits localization sensitivity that is essential for accurate object localization. We exploit the above properties of our recognition module by integrating it on an iterative localization mechanism that alternates between scoring a box proposal and refining its location with a deep CNN regression model. Thanks to the efficient use of our modules, we detect objects with very high localization accuracy. On the detection challenges of PASCAL VOC2007 and PASCAL VOC2012 we achieve mAP of 78.2% and 73.9% correspondingly, surpassing any other published work by a significant margin.Comment: Extended technical report -- short version to appear at ICCV 201