EFFECTS OF SPATIAL RESOLUTION AND LANDSCAPE STRUCTURE ON LAND COVER CHARACTERIZATION

This dissertation addressed problems in scaling, problems that are among the main challenges in remote sensing. The principal objective of the research was to investigate the effects of changing spatial scale on the representation of land cover. A second objective was to determine the relationship between such effects, characteristics of landscape structure and scaling procedures. Four research issues related to spatial scaling were examined. They included: 1) the upscaling of Normalized Difference Vegetation Index (NDVI); 2) the effects of spatial scale on indices of landscape structure; 3) the representation of land cover databases at different spatial scales; and 4) the relationships between landscape indices and land cover area estimations. The overall bias resulting from non-linearity of NDVI in relation to spatial resolution is generally insignificant as compared to other factors such as influences of aerosols and water vapor. The bias is, however, related to land surface characteristics. Significant errors may be introduced in heterogeneous areas where different land cover types exhibit strong spectral contrast. Spatially upscaled SPOT and TM NDVIs have information content comparable with the AVHRR-derived NDVI: Indices of landscape structure and spatial resolution are generally related, but the exact forms of the relationships are subject to changes in other factors including the basic patch unit constituting a landscape and the proportional area of foreground land cover under consideration. The extent of agreement between spatially aggregated coarse resolution land cover datasets and full resolution datasets changes with the properties of the original datasets, including the pixel size and class definition. There are close relationships between landscape structure and class areas estimated from spatially aggregated land cover databases. The relationships, however, do not permit extension from one area to another. Inversion calibration across different geographic/ecological areas is, therefore, not feasible. Different rules govern the land cover area changes across resolutions when different upscaling methods are used. Special attention should be given to comparison between land cover maps derived using different methods

Threats to Soil Quality in Europe

During the recent years, there has been a surge of concern and attention in Europe to soil degradation processes. One of the most innovative aspects of the newly proposed Soil Thematic Strategy for the EU is the recognition of the multifunctionality of soils. This report is summarizing the reserch results on the fields of soil degradation and soil quality reserach. Chapters of the report include: Preface Characterisation of soil degradation risk: an overview Soil quality in the European Union Main threats to soil quality in Europe The Natural Susceptibility on European Soils to Compaction Soil Erosion: a main threats to the soils in Europe Soil Erosion risk assessment in the alpine area according to the IPCC scenarios An example of the threat of wind erosion using DSM techniques Updated map of salt affected soils in the European Union A framework to estimate the distribution of heavy metals in European Soils Application of Soil Organic Carbon Status Indicators for policy-decision making in the EU Main threats on soil biodiversity: The case of agricultural activities impacts on soil microarthropods Implications of soil threats on agricultural areas in Europe MEUSIS, a Multi-Scale European Soil Information System (MEUSIS): novel ways to derive soil indicators through UpscalingJRC.H.7-Land management and natural hazard

Testing the ability of Unmanned Aerial Systems and machine learning to map weeds at subfield scales: a test with the weed Alopecurus myosuroides (Huds).

BACKGROUND: It is important to map agricultural weed populations in order to improve management and maintain future food security. Advances in data collection and statistical methodology have created new opportunities to aid in the mapping of weed populations. We set out to apply these new methodologies (Unmanned Aerial Systems - UAS) and statistical techniques (Convolutional Neural Networks - CNN) for the mapping of black-grass, a highly impactful weed in wheat fields in the UK. We tested this by undertaking an extensive UAS and field-based mapping over the course of two years, in total collecting multispectral image data from 102 fields, with 76 providing informative data. We used these data to construct a Vegetation Index (VI), that we used to train a custom CNN model from scratch. We undertook a suite of data engineering techniques, such as balancing and cleaning to optimize performance of our metrics. We also investigate the transferability of the models from one field to another. RESULTS: The results show that our data collection methodology and implementation of CNN outperform pervious approaches in the literature. We show that data engineering to account for "artefacts" in the image data increases our metrics significantly. We are not able to identify any traits that are shared between fields that result in high scores from our novel leave one field our cross validation (LOFO-CV) tests. CONCLUSION: We conclude that this evaluation procedure is a better estimation of real-world predictive value when compared to past studies. We conclude that by engineering the image data set into discrete classes of data quality we increase the prediction accuracy from the baseline model by 5% to an AUC of 0.825. We find that the temporal effects studied here have no effect on our ability to model weed densities

Estimation of High-Resolution Evapotranspiration in Heterogeneous Environments Using Drone-Based Remote Sensing

Evapotranspiration (ET) is a key element of hydrological cycle analysis, irrigation demand, and for better allocation of water resources in the ecosystem. For successful water resources management activities, precise estimate of ET is necessary. Although several attempts have been made to achieve that, variation in temporal and spatial scales constitutes a major challenge, particularly in heterogeneous canopy environments such as vineyards, orchards, and natural areas. The advent of remote sensing information from different platforms, particularly the small unmanned aerial systems (sUAS) technology with lightweight sensors allows users to capture high-resolution data faster than traditional methods, described as “flexible in timing”. In this study, the Two Source Energy Balance Model (TSEB) along with high-resolution data from sUAS were used to bridge the gap in ET issues related to spatial and temporal scales. Over homogeneous vegetation surfaces, relatively low spatial resolution information derived from Landsat (e.g., 30 m) might be appropriate for ET estimate, which can capture differences between fields. However, in agricultural landscapes with presence of vegetation rows and interrows, the homogeneity is less likely to be met and the ideal conditions may be difficult to identify. For most agricultural settings, row spacing can vary within a field (vineyards and orchards), making the agricultural landscape less homogenous. This leads to a key question related to how the contextual spatial domain/model grid size could influence the estimation of surface fluxes in canopy environments such as vineyards. Furthermore, temporal upscaling of instantaneous ET at daily or longer time scales is of great practical importance in managing water resources. While remote sensing-based ET models are promising tools to estimate instantaneous ET, additional models are needed to scale up the estimated or modeled instantaneous ET to daily values. Reliable and precise daily ET (ETd) estimation is essential for growers and water resources managers to understand the diurnal and seasonal variation in ET. In response to this issue, different existing extrapolation/upscaling daily ET (ETd) models were assessed using eddy covariance (EC) and sUAS measurements. On the other hand, ET estimation over semi-arid naturally vegetated regions becomes an issue due to high heterogeneity in such environments where vegetation tends to be randomly distributed over the land surface. This reflects the conditions of natural vegetation in river corridors. While significant efforts were made to estimate ET at agricultural landscapes, accurate spatial information of ET over riparian ecosystems is still challenging due to various species associated with variable amounts of bare soil and surface water. To achieve this, the TSEB model with high-resolution remote sensing data from sUAS were used to characterize the spatial heterogeneity and calculate the ET over a natural environment that features arid climate and various vegetation types at the San Rafael River corridor

Retrieval of Seasonal Leaf Area Index from Simulated EnMAP Data through Optimized LUT-Based Inversion of the PROSAIL Model

The upcoming satellite mission EnMAP offers the opportunity to retrieve information on the seasonal development of vegetation parameters on a regional scale based on hyperspectral data. This study aims to investigate whether an analysis method for the retrieval of leaf area index (LAI),developed and validated on the 4 m resolution scale of six airborne datasets covering the 2012 growing period, is transferable to the spaceborne 30 m resolution scale of the future EnMAP mission. The widely used PROSAIL model is applied to generate look-up-table (LUT) libraries, by which the model is inverted to derive LAI information. With the goal of defining the impact of different selection criteria in the inversion process, different techniques for the LUT based inversion are tested, such as several cost functions, type and amount of artificial noise, number of considered solutions and type of averaging method. The optimal inversion procedure (Laplace, median, 4% inverse multiplicative noise, 350 out of 100, 000 averages) is identified by validating the results against corresponding in-situ measurements (n = 330) of LAI. Finally, the best performing LUT inversion (R-2 = 0.65, RMSE = 0.64) is adapted to simulated EnMAP data, generated from the airborne acquisitions. The comparison of the retrieval results to upscaled maps of LAI, previously validated on the 4 m scale, shows that the optimized retrieval method can successfully be transferred to spaceborne EnMAP data

Retrieval of Seasonal Leaf Area Index from Simulated EnMAP Data through Optimized LUT-Based Inversion of the PROSAIL Model

The upcoming satellite mission EnMAP offers the opportunity to retrieve information on the seasonal development of vegetation parameters on a regional scale based on hyperspectral data. This study aims to investigate whether an analysis method for the retrieval of leaf area index (LAI),developed and validated on the 4 m resolution scale of six airborne datasets covering the 2012 growing period, is transferable to the spaceborne 30 m resolution scale of the future EnMAP mission. The widely used PROSAIL model is applied to generate look-up-table (LUT) libraries, by which the model is inverted to derive LAI information. With the goal of defining the impact of different selection criteria in the inversion process, different techniques for the LUT based inversion are tested, such as several cost functions, type and amount of artificial noise, number of considered solutions and type of averaging method. The optimal inversion procedure (Laplace, median, 4% inverse multiplicative noise, 350 out of 100, 000 averages) is identified by validating the results against corresponding in-situ measurements (n = 330) of LAI. Finally, the best performing LUT inversion (R-2 = 0.65, RMSE = 0.64) is adapted to simulated EnMAP data, generated from the airborne acquisitions. The comparison of the retrieval results to upscaled maps of LAI, previously validated on the 4 m scale, shows that the optimized retrieval method can successfully be transferred to spaceborne EnMAP data

Multi-scalar remote sensing of the northern mixed prairie vegetation

Optimal scale of study and scaling are fundamental to ecological research, and have been made easier with remotely sensed (RS) data. With access to RS data at multiple scales, it is important to identify how they compare and how effectively information at a specific scale will potentially transfer between scales. Therefore, my research compared the spatial, spectral, and temporal aspects of scale of RS data to study biophysical properties and spatio-temporal dynamics of the northern mixed prairie vegetation. I collected ground cover, dominant species, aboveground biomass, and leaf area index (LAI) from 41 sites and along 3 transects in the West Block of Grasslands National Park of Canada (GNPC; +49°, -107°) between June-July of 2006 and 2007. Narrowband (VIn) and broadband vegetation indices (VIb) were derived from RS data at multiple scales acquired through field spectroradiometry (1 m) and satellite imagery (10, 20, 30 m). VIs were upscaled from their native scales to coarser scales for spatial comparison, and time-series imagery at ~5-year intervals was used for temporal comparison. Results showed VIn, VIb, and LAI captured the spatial variation of plant biophysical properties along topographical gradients and their spatial scales ranged from 35-200 m. Among the scales compared, RS data at finer scales showed stronger ability than coarser scales to estimate ground vegetation. VIn were found to be better predictors than VIb in estimating LAI. Upscaling at all spatial scales showed similar weakening trends for LAI prediction using VIb, however spatial regression methods were necessary to minimize spatial effects in the RS data sets and to improve the prediction results. Multiple endmember spectral mixture analysis (MESMA) successfully captured the spatial heterogeneity of vegetation and effective modeling of sub-pixel spectral variability to produce improved vegetation maps. However, the efficiency of spectral unmixing was found to be highly dependent on the identification of optimal type and number of region-specific endmembers, and comparison of spectral unmixing on imagery at different scales showed spectral resolution to be important over spatial resolution. With the development of a comprehensive endmember library, MESMA may be used as a standard tool for identifying spatio-temporal changes in time-series imagery. Climatic variables were found to affect the success of unmixing, with lower success for years of climatic extremes. Change-detection analysis showed the success of biodiversity conservation practices of GNPC since establishment of the park and suggests that its management strategies are effective in maintaining vegetation heterogeneity in the region. Overall, my research has advanced the understanding of RS of the northern mixed prairie vegetation, especially in the context of effects of scale and scaling. From an eco-management perspective, this research has provided cost- and time-effective methods for vegetation mapping and monitoring. Data and techniques tested in this study will be even more useful with hyperspectral imagery should they become available for the northern mixed prairie

Uncertainties in Ecosystem Service Maps: A Comparison on the European Scale

Safeguarding the benefits that ecosystems provide to society is increasingly included as a target in international policies. To support such policies, ecosystem service maps are made. However, there is little attention for the accuracy of these maps. We made a systematic review and quantitative comparison of ecosystem service maps on the European scale to generate insights in the uncertainty of ecosystem service maps and discuss the possibilities for quantitative validation. Maps of climate regulation and recreation were reasonably similar while large uncertainties among maps of erosion protection and flood regulation were observed. Pollination maps had a moderate similarity. Differences among the maps were caused by differences in indicator definition, level of process understanding, mapping aim, data sources and methodology. Absence of suitable observed data on ecosystem services provisioning hampers independent validation of the maps. Consequently, there are, so far, no accurate measures for ecosystem service map quality. Policy makers and other users need to be cautious when applying ecosystem service maps for decision-making. The results illustrate the need for better process understanding and data acquisition to advance ecosystem service mapping, modelling and validation