A semantic and agent-based approach to support information retrieval, interoperability and multi-lateral viewpoints for heterogeneous environmental databases

PhDData stored in individual autonomous databases often needs to be combined and interrelated. For example, in the Inland Water (IW) environment monitoring domain, the spatial and temporal variation of measurements of different water quality indicators stored in different databases are of interest. Data from multiple data sources is more complex to combine when there is a lack of metadata in a computation forin and when the syntax and semantics of the stored data models are heterogeneous. The main types of information retrieval (IR) requirements are query transparency and data harmonisation for data interoperability and support for multiple user views. A combined Semantic Web based and Agent based distributed system framework has been developed to support the above IR requirements. It has been implemented using the Jena ontology and JADE agent toolkits. The semantic part supports the interoperability of autonomous data sources by merging their intensional data, using a Global-As-View or GAV approach, into a global semantic model, represented in DAML+OIL and in OWL. This is used to mediate between different local database views. The agent part provides the semantic services to import, align and parse semantic metadata instances, to support data mediation and to reason about data mappings during alignment. The framework has applied to support information retrieval, interoperability and multi-lateral viewpoints for four European environmental agency databases. An extended GAV approach has been developed and applied to handle queries that can be reformulated over multiple user views of the stored data. This allows users to retrieve data in a conceptualisation that is better suited to them rather than to have to understand the entire detailed global view conceptualisation. User viewpoints are derived from the global ontology or existing viewpoints of it. This has the advantage that it reduces the number of potential conceptualisations and their associated mappings to be more computationally manageable. Whereas an ad hoc framework based upon conventional distributed programming language and a rule framework could be used to support user views and adaptation to user views, a more formal framework has the benefit in that it can support reasoning about the consistency, equivalence, containment and conflict resolution when traversing data models. A preliminary formulation of the formal model has been undertaken and is based upon extending a Datalog type algebra with hierarchical, attribute and instance value operators. These operators can be applied to support compositional mapping and consistency checking of data views. The multiple viewpoint system was implemented as a Java-based application consisting of two sub-systems, one for viewpoint adaptation and management, the other for query processing and query result adjustment

Semantic definition of a subset of the structured query language (SQL)

Journal ArticleSQL is a relational database definition and manipulation language. Portions of the manipulation language are readily described in terms of relational algebra. The semantics of a subset of the SQL select statement is described. The select statement allows the user to query the database. The select statement is shown to be equivalent to a series of relational and set operations. The semantics are described in terms of abstract data types for relation schemes, tuples, and relations. Certain forms of the union or intersection of two select statements are shown to have equivalent single select statement forms

Adaptive Management of Multimodel Data and Heterogeneous Workloads

Data management systems are facing a growing demand for a tighter integration of heterogeneous data from different applications and sources for both operational and analytical purposes in real-time. However, the vast diversification of the data management landscape has led to a situation where there is a trade-off between high operational performance and a tight integration of data. The difference between the growth of data volume and the growth of computational power demands a new approach for managing multimodel data and handling heterogeneous workloads. With PolyDBMS we present a novel class of database management systems, bridging the gap between multimodel database and polystore systems. This new kind of database system combines the operational capabilities of traditional database systems with the flexibility of polystore systems. This includes support for data modifications, transactions, and schema changes at runtime. With native support for multiple data models and query languages, a PolyDBMS presents a holistic solution for the management of heterogeneous data. This does not only enable a tight integration of data across different applications, it also allows a more efficient usage of resources. By leveraging and combining highly optimized database systems as storage and execution engines, this novel class of database system takes advantage of decades of database systems research and development. In this thesis, we present the conceptual foundations and models for building a PolyDBMS. This includes a holistic model for maintaining and querying multiple data models in one logical schema that enables cross-model queries. With the PolyAlgebra, we present a solution for representing queries based on one or multiple data models while preserving their semantics. Furthermore, we introduce a concept for the adaptive planning and decomposition of queries across heterogeneous database systems with different capabilities and features. The conceptual contributions presented in this thesis materialize in Polypheny-DB, the first implementation of a PolyDBMS. Supporting the relational, document, and labeled property graph data model, Polypheny-DB is a suitable solution for structured, semi-structured, and unstructured data. This is complemented by an extensive type system that includes support for binary large objects. With support for multiple query languages, industry standard query interfaces, and a rich set of domain-specific data stores and data sources, Polypheny-DB offers a flexibility unmatched by existing data management solutions

Comparison of Information Representation Formalisms for Scalable File Agnostic Information Infrastructures

In the early days of computing, files where just a natural way of storing information -- which reflected the way one would file their punch cards in a cabinet drawer. Unfortunately, the requirement to fragment information into such chunks, is a huge bottleneck for the evolution of global information space that the Internet has become. The concept of file causes several problems including unnatural clustering of information, unnecessary replication of data and very expensive information discovery in distributed computing environments. The overall goal of this work is to design an architecture enabling new era in computing and networking -- a computing infrastructure without the concept of file. Files are seen by many specialists as one of the main bottlenecks of modern IT systems evolution. This is mostly due to a very unnatural fragmentation of information into chunks which are easier to manage by operating systems but much more difficult for information processing tools and eventually by humans themselves

A General Framework for Representing, Reasoning and Querying with Annotated Semantic Web Data

We describe a generic framework for representing and reasoning with annotated Semantic Web data, a task becoming more important with the recent increased amount of inconsistent and non-reliable meta-data on the web. We formalise the annotated language, the corresponding deductive system and address the query answering problem. Previous contributions on specific RDF annotation domains are encompassed by our unified reasoning formalism as we show by instantiating it on (i) temporal, (ii) fuzzy, and (iii) provenance annotations. Moreover, we provide a generic method for combining multiple annotation domains allowing to represent, e.g. temporally-annotated fuzzy RDF. Furthermore, we address the development of a query language -- AnQL -- that is inspired by SPARQL, including several features of SPARQL 1.1 (subqueries, aggregates, assignment, solution modifiers) along with the formal definitions of their semantics