Transforming Graph Representations for Statistical Relational Learning

Relational data representations have become an increasingly important topic due to the recent proliferation of network datasets (e.g., social, biological, information networks) and a corresponding increase in the application of statistical relational learning (SRL) algorithms to these domains. In this article, we examine a range of representation issues for graph-based relational data. Since the choice of relational data representation for the nodes, links, and features can dramatically affect the capabilities of SRL algorithms, we survey approaches and opportunities for relational representation transformation designed to improve the performance of these algorithms. This leads us to introduce an intuitive taxonomy for data representation transformations in relational domains that incorporates link transformation and node transformation as symmetric representation tasks. In particular, the transformation tasks for both nodes and links include (i) predicting their existence, (ii) predicting their label or type, (iii) estimating their weight or importance, and (iv) systematically constructing their relevant features. We motivate our taxonomy through detailed examples and use it to survey and compare competing approaches for each of these tasks. We also discuss general conditions for transforming links, nodes, and features. Finally, we highlight challenges that remain to be addressed

Hierarchical relational models for document networks

We develop the relational topic model (RTM), a hierarchical model of both network structure and node attributes. We focus on document networks, where the attributes of each document are its words, that is, discrete observations taken from a fixed vocabulary. For each pair of documents, the RTM models their link as a binary random variable that is conditioned on their contents. The model can be used to summarize a network of documents, predict links between them, and predict words within them. We derive efficient inference and estimation algorithms based on variational methods that take advantage of sparsity and scale with the number of links. We evaluate the predictive performance of the RTM for large networks of scientific abstracts, web documents, and geographically tagged news.Comment: Published in at http://dx.doi.org/10.1214/09-AOAS309 the Annals of Applied Statistics (http://www.imstat.org/aoas/) by the Institute of Mathematical Statistics (http://www.imstat.org

Structural Logistic Regression for Link Analysis

We present Structural Logistic Regression, an extension of logistic regression to modeling relational data. It is an integrated approach to building regression models from data stored in relational databases in which potential predictors, both boolean and real-valued, are generated by structured search in the space of queries to the database, and then tested with statistical information criteria for inclusion in a logistic regression. Using statistics and relational representation allows modeling in noisy domains with complex structure. Link prediction is a task of high interest with exactly such characteristics. Be it in the domain of scientific citations, social networks or hypertext, the underlying data are extremely noisy and the features useful for prediction are not readily available in a flat file format. We propose the application of Structural Logistic Regression to building link prediction models, and present experimental results for the task of predicting citations made in scientific literature using relational data taken from the CiteSeer search engine. This data includes the citation graph, authorship and publication venues of papers, as well as their word content

ACORA: Distribution-Based Aggregation for Relational Learning from Identifier Attributes

Feature construction through aggregation plays an essential role in modeling relational domains with one-to-many relationships between tables. One-to-many relationships lead to bags (multisets) of related entities, from which predictive information must be captured. This paper focuses on aggregation from categorical attributes that can take many values (e.g., object identifiers). We present a novel aggregation method as part of a relational learning system ACORA, that combines the use of vector distance and meta-data about the class-conditional distributions of attribute values. We provide a theoretical foundation for this approach deriving a "relational fixed-effect" model within a Bayesian framework, and discuss the implications of identifier aggregation on the expressive power of the induced model. One advantage of using identifier attributes is the circumvention of limitations caused either by missing/unobserved object properties or by independence assumptions. Finally, we show empirically that the novel aggregators can generalize in the presence of identi- fier (and other high-dimensional) attributes, and also explore the limitations of the applicability of the methods.Information Systems Working Papers Serie