Deep edge map guided depth super resolution

Accurate edge reconstruction is critical for depth map super resolution (SR). Therefore, many traditional SR methods utilize edge maps to guide depth SR. However, it is difficult to predict accurate edge maps from low resolution (LR) depth maps. In this paper, we propose a deep edge map guided depth SR method, which includes an edge prediction subnetwork and an SR subnetwork. The edge prediction subnetwork takes advantage of the hierarchical representation of color and depth images to produce accurate edge maps, which promote the performance of SR subnetwork. The SR subnetwork is a disentangling cascaded network to progressively upsample SR result, where every level is made up of a weight sharing module and an adaptive module. The weight sharing module extracts the general features in different levels, while the adaptive module transfers the general features to the specific features to adapt to different degraded inputs. Quantitative and qualitative evaluations on various datasets with different magnification factors demonstrate the effectiveness and promising performance of the proposed method. In addition, we construct a benchmark dataset captured by Kinect-v2 to facilitate research on real-world depth map SR

Finite Element Modeling Driven by Health Care and Aerospace Applications

This thesis concerns the development, analysis, and computer implementation of mesh generation algorithms encountered in finite element modeling in health care and aerospace. The finite element method can reduce a continuous system to a discrete idealization that can be solved in the same manner as a discrete system, provided the continuum is discretized into a finite number of simple geometric shapes (e.g., triangles in two dimensions or tetrahedrons in three dimensions). In health care, namely anatomic modeling, a discretization of the biological object is essential to compute tissue deformation for physics-based simulations. This thesis proposes an efficient procedure to convert 3-dimensional imaging data into adaptive lattice-based discretizations of well-shaped tetrahedra or mixed elements (i.e., tetrahedra, pentahedra and hexahedra). This method operates directly on segmented images, thus skipping a surface reconstruction that is required by traditional Computer-Aided Design (CAD)-based meshing techniques and is convoluted, especially in complex anatomic geometries. Our approach utilizes proper mesh gradation and tissue-specific multi-resolution, without sacrificing the fidelity and while maintaining a smooth surface to reflect a certain degree of visual reality. Image-to-mesh conversion can facilitate accurate computational modeling for biomechanical registration of Magnetic Resonance Imaging (MRI) in image-guided neurosurgery. Neuronavigation with deformable registration of preoperative MRI to intraoperative MRI allows the surgeon to view the location of surgical tools relative to the preoperative anatomical (MRI) or functional data (DT-MRI, fMRI), thereby avoiding damage to eloquent areas during tumor resection. This thesis presents a deformable registration framework that utilizes multi-tissue mesh adaptation to map preoperative MRI to intraoperative MRI of patients who have undergone a brain tumor resection. Our enhancements with mesh adaptation improve the accuracy of the registration by more than 5 times compared to rigid and traditional physics-based non-rigid registration, and by more than 4 times compared to publicly available B-Spline interpolation methods. The adaptive framework is parallelized for shared memory multiprocessor architectures. Performance analysis shows that this method could be applied, on average, in less than two minutes, achieving desirable speed for use in a clinical setting. The last part of this thesis focuses on finite element modeling of CAD data. This is an integral part of the design and optimization of components and assemblies in industry. We propose a new parallel mesh generator for efficient tetrahedralization of piecewise linear complex domains in aerospace. CAD-based meshing algorithms typically improve the shape of the elements in a post-processing step due to high complexity and cost of the operations involved. On the contrary, our method optimizes the shape of the elements throughout the generation process to obtain a maximum quality and utilizes high performance computing to reduce the overheads and improve end-user productivity. The proposed mesh generation technique is a combination of Advancing Front type point placement, direct point insertion, and parallel multi-threaded connectivity optimization schemes. The mesh optimization is based on a speculative (optimistic) approach that has been proven to perform well on hardware-shared memory. The experimental evaluation indicates that the high quality and performance attributes of this method see substantial improvement over existing state-of-the-art unstructured grid technology currently incorporated in several commercial systems. The proposed mesh generator will be part of an Extreme-Scale Anisotropic Mesh Generation Environment to meet industries expectations and NASA\u27s CFD visio

Nonlinear Spectral Geometry Processing via the TV Transform

We introduce a novel computational framework for digital geometry processing, based upon the derivation of a nonlinear operator associated to the total variation functional. Such operator admits a generalized notion of spectral decomposition, yielding a sparse multiscale representation akin to Laplacian-based methods, while at the same time avoiding undesirable over-smoothing effects typical of such techniques. Our approach entails accurate, detail-preserving decomposition and manipulation of 3D shape geometry while taking an especially intuitive form: non-local semantic details are well separated into different bands, which can then be filtered and re-synthesized with a straightforward linear step. Our computational framework is flexible, can be applied to a variety of signals, and is easily adapted to different geometry representations, including triangle meshes and point clouds. We showcase our method throughout multiple applications in graphics, ranging from surface and signal denoising to detail transfer and cubic stylization.Comment: 16 pages, 20 figure

Real-time human performance capture and synthesis

Most of the images one finds in the media, such as on the Internet or in textbooks and magazines, contain humans as the main point of attention. Thus, there is an inherent necessity for industry, society, and private persons to be able to thoroughly analyze and synthesize the human-related content in these images. One aspect of this analysis and subject of this thesis is to infer the 3D pose and surface deformation, using only visual information, which is also known as human performance capture. Human performance capture enables the tracking of virtual characters from real-world observations, and this is key for visual effects, games, VR, and AR, to name just a few application areas. However, traditional capture methods usually rely on expensive multi-view (marker-based) systems that are prohibitively expensive for the vast majority of people, or they use depth sensors, which are still not as common as single color cameras. Recently, some approaches have attempted to solve the task by assuming only a single RGB image is given. Nonetheless, they can either not track the dense deforming geometry of the human, such as the clothing layers, or they are far from real time, which is indispensable for many applications. To overcome these shortcomings, this thesis proposes two monocular human performance capture methods, which for the first time allow the real-time capture of the dense deforming geometry as well as an unseen 3D accuracy for pose and surface deformations. At the technical core, this work introduces novel GPU-based and data-parallel optimization strategies in conjunction with other algorithmic design choices that are all geared towards real-time performance at high accuracy. Moreover, this thesis presents a new weakly supervised multiview training strategy combined with a fully differentiable character representation that shows superior 3D accuracy. However, there is more to human-related Computer Vision than only the analysis of people in images. It is equally important to synthesize new images of humans in unseen poses and also from camera viewpoints that have not been observed in the real world. Such tools are essential for the movie industry because they, for example, allow the synthesis of photo-realistic virtual worlds with real-looking humans or of contents that are too dangerous for actors to perform on set. But also video conferencing and telepresence applications can benefit from photo-real 3D characters, as they can enhance the immersive experience of these applications. Here, the traditional Computer Graphics pipeline for rendering photo-realistic images involves many tedious and time-consuming steps that require expert knowledge and are far from real time. Traditional rendering involves character rigging and skinning, the modeling of the surface appearance properties, and physically based ray tracing. Recent learning-based methods attempt to simplify the traditional rendering pipeline and instead learn the rendering function from data resulting in methods that are easier accessible to non-experts. However, most of them model the synthesis task entirely in image space such that 3D consistency cannot be achieved, and/or they fail to model motion- and view-dependent appearance effects. To this end, this thesis presents a method and ongoing work on character synthesis, which allow the synthesis of controllable photoreal characters that achieve motion- and view-dependent appearance effects as well as 3D consistency and which run in real time. This is technically achieved by a novel coarse-to-fine geometric character representation for efficient synthesis, which can be solely supervised on multi-view imagery. Furthermore, this work shows how such a geometric representation can be combined with an implicit surface representation to boost synthesis and geometric quality.In den meisten Bildern in den heutigen Medien, wie dem Internet, Büchern und Magazinen, ist der Mensch das zentrale Objekt der Bildkomposition. Daher besteht eine inhärente Notwendigkeit für die Industrie, die Gesellschaft und auch für Privatpersonen, die auf den Mensch fokussierten Eigenschaften in den Bildern detailliert analysieren und auch synthetisieren zu können. Ein Teilaspekt der Anaylse von menschlichen Bilddaten und damit Bestandteil der Thesis ist das Rekonstruieren der 3D-Skelett-Pose und der Oberflächendeformation des Menschen anhand von visuellen Informationen, was fachsprachlich auch als Human Performance Capture bezeichnet wird. Solche Rekonstruktionsverfahren ermöglichen das Tracking von virtuellen Charakteren anhand von Beobachtungen in der echten Welt, was unabdingbar ist für Applikationen im Bereich der visuellen Effekte, Virtual und Augmented Reality, um nur einige Applikationsfelder zu nennen. Nichtsdestotrotz basieren traditionelle Tracking-Methoden auf teuren (markerbasierten) Multi-Kamera Systemen, welche für die Mehrheit der Bevölkerung nicht erschwinglich sind oder auf Tiefenkameras, die noch immer nicht so gebräuchlich sind wie herkömmliche Farbkameras. In den letzten Jahren gab es daher erste Methoden, die versuchen, das Tracking-Problem nur mit Hilfe einer Farbkamera zu lösen. Allerdings können diese entweder die Kleidung der Person im Bild nicht tracken oder die Methoden benötigen zu viel Rechenzeit, als dass sie in realen Applikationen genutzt werden könnten. Um diese Probleme zu lösen, stellt die Thesis zwei monokulare Human Performance Capture Methoden vor, die zum ersten Mal eine Echtzeit-Rechenleistung erreichen sowie im Vergleich zu vorherigen Arbeiten die Genauigkeit von Pose und Oberfläche in 3D weiter verbessern. Der Kern der Methoden beinhaltet eine neuartige GPU-basierte und datenparallelisierte Optimierungsstrategie, die im Zusammenspiel mit anderen algorithmischen Designentscheidungen akkurate Ergebnisse erzeugt und dabei eine Echtzeit-Laufzeit ermöglicht. Daneben wird eine neue, differenzierbare und schwach beaufsichtigte, Multi-Kamera basierte Trainingsstrategie in Kombination mit einem komplett differenzierbaren Charaktermodell vorgestellt, welches ungesehene 3D Präzision erreicht. Allerdings spielt nicht nur die Analyse von Menschen in Bildern in Computer Vision eine wichtige Rolle, sondern auch die Möglichkeit, neue Bilder von Personen in unterschiedlichen Posen und Kamera- Blickwinkeln synthetisch zu rendern, ohne dass solche Daten zuvor in der Realität aufgenommen wurden. Diese Methoden sind unabdingbar für die Filmindustrie, da sie es zum Beispiel ermöglichen, fotorealistische virtuelle Welten mit real aussehenden Menschen zu erzeugen, sowie die Möglichkeit bieten, Szenen, die für den Schauspieler zu gefährlich sind, virtuell zu produzieren, ohne dass eine reale Person diese Aktionen tatsächlich ausführen muss. Aber auch Videokonferenzen und Telepresence-Applikationen können von fotorealistischen 3D-Charakteren profitieren, da diese die immersive Erfahrung von solchen Applikationen verstärken. Traditionelle Verfahren zum Rendern von fotorealistischen Bildern involvieren viele mühsame und zeitintensive Schritte, welche Expertenwissen vorraussetzen und zudem auch Rechenzeiten erreichen, die jenseits von Echtzeit sind. Diese Schritte beinhalten das Rigging und Skinning von virtuellen Charakteren, das Modellieren von Reflektions- und Materialeigenschaften sowie physikalisch basiertes Ray Tracing. Vor Kurzem haben Deep Learning-basierte Methoden versucht, die Rendering-Funktion von Daten zu lernen, was in Verfahren resultierte, die eine Nutzung durch Nicht-Experten ermöglicht. Allerdings basieren die meisten Methoden auf Synthese-Verfahren im 2D-Bildbereich und können daher keine 3D-Konsistenz garantieren. Darüber hinaus gelingt es den meisten Methoden auch nicht, bewegungs- und blickwinkelabhängige Effekte zu erzeugen. Daher präsentiert diese Thesis eine neue Methode und eine laufende Forschungsarbeit zum Thema Charakter-Synthese, die es erlauben, fotorealistische und kontrollierbare 3D-Charakteren synthetisch zu rendern, die nicht nur 3D-konsistent sind, sondern auch bewegungs- und blickwinkelabhängige Effekte modellieren und Echtzeit-Rechenzeiten ermöglichen. Dazu wird eine neuartige Grobzu- Fein-Charakterrepräsentation für effiziente Bild-Synthese von Menschen vorgestellt, welche nur anhand von Multi-Kamera-Daten trainiert werden kann. Daneben wird gezeigt, wie diese explizite Geometrie- Repräsentation mit einer impliziten Oberflächendarstellung kombiniert werden kann, was eine bessere Synthese von geomtrischen Deformationen sowie Bildern ermöglicht.ERC Consolidator Grant 4DRepL

MONOCULAR POSE ESTIMATION AND SHAPE RECONSTRUCTION OF QUASI-ARTICULATED OBJECTS WITH CONSUMER DEPTH CAMERA

Quasi-articulated objects, such as human beings, are among the most commonly seen objects in our daily lives. Extensive research have been dedicated to 3D shape reconstruction and motion analysis for this type of objects for decades. A major motivation is their wide applications, such as in entertainment, surveillance and health care. Most of existing studies relied on one or more regular video cameras. In recent years, commodity depth sensors have become more and more widely available. The geometric measurements delivered by the depth sensors provide significantly valuable information for these tasks. In this dissertation, we propose three algorithms for monocular pose estimation and shape reconstruction of quasi-articulated objects using a single commodity depth sensor. These three algorithms achieve shape reconstruction with increasing levels of granularity and personalization. We then further develop a method for highly detailed shape reconstruction based on our pose estimation techniques. Our first algorithm takes advantage of a motion database acquired with an active marker-based motion capture system. This method combines pose detection through nearest neighbor search with pose refinement via non-rigid point cloud registration. It is capable of accommodating different body sizes and achieves more than twice higher accuracy compared to a previous state of the art on a publicly available dataset. The above algorithm performs frame by frame estimation and therefore is less prone to tracking failure. Nonetheless, it does not guarantee temporal consistent of the both the skeletal structure and the shape and could be problematic for some applications. To address this problem, we develop a real-time model-based approach for quasi-articulated pose and 3D shape estimation based on Iterative Closest Point (ICP) principal with several novel constraints that are critical for monocular scenario. In this algorithm, we further propose a novel method for automatic body size estimation that enables its capability to accommodate different subjects. Due to the local search nature, the ICP-based method could be trapped to local minima in the case of some complex and fast motions. To address this issue, we explore the potential of using statistical model for soft point correspondences association. Towards this end, we propose a unified framework based on Gaussian Mixture Model for joint pose and shape estimation of quasi-articulated objects. This method achieves state-of-the-art performance on various publicly available datasets. Based on our pose estimation techniques, we then develop a novel framework that achieves highly detailed shape reconstruction by only requiring the user to move naturally in front of a single depth sensor. Our experiments demonstrate reconstructed shapes with rich geometric details for various subjects with different apparels. Last but not the least, we explore the applicability of our method on two real-world applications. First of all, we combine our ICP-base method with cloth simulation techniques for Virtual Try-on. Our system delivers the first promising 3D-based virtual clothing system. Secondly, we explore the possibility to extend our pose estimation algorithms to assist physical therapist to identify their patients’ movement dysfunctions that are related to injuries. Our preliminary experiments have demonstrated promising results by comparison with the gold standard active marker-based commercial system. Throughout the dissertation, we develop various state-of-the-art algorithms for pose estimation and shape reconstruction of quasi-articulated objects by leveraging the geometric information from depth sensors. We also demonstrate their great potentials for different real-world applications

Fusion of magnetic resonance and ultrasound images for endometriosis detection

Endometriosis is a gynecologic disorder that typically affects women in their reproductive age and is associated with chronic pelvic pain and infertility. In the context of pre-operative diagnosis and guided surgery, endometriosis is a typical example of pathology that requires the use of both magnetic resonance (MR) and ultrasound (US) modalities. These modalities are used side by sidebecause they contain complementary information. However, MRI and US images have different spatial resolutions, fields of view and contrasts and are corrupted by different kinds of noise, which results in important challenges related to their analysis by radiologists. The fusion of MR and US images is a way of facilitating the task of medical experts and improve the pre-operative diagnosis and the surgery mapping. The object of this PhD thesis is to propose a new automatic fusion method for MRI and US images. First, we assume that the MR and US images to be fused are aligned, i.e., there is no geometric distortion between these images. We propose a fusion method for MR and US images, which aims at combining the advantages of each modality, i.e., good contrast and signal to noise ratio for the MR image and good spatial resolution for the US image. The proposed algorithm is based on an inverse problem, performing a super-resolution of the MR image and a denoising of the US image. A polynomial function is introduced to modelthe relationships between the gray levels of the MR and US images. However, the proposed fusion method is very sensitive to registration errors. Thus, in a second step, we introduce a joint fusion and registration method for MR and US images. Registration is a complicated task in practical applications. The proposed MR/US image fusion performs jointly super-resolution of the MR image and despeckling of the US image, and is able to automatically account for registration errors. A polynomial function is used to link ultrasound and MR images in the fusion process while an appropriate similarity measure is introduced to handle the registration problem. The proposed registration is based on a non-rigid transformation containing a local elastic B-spline model and a global affine transformation. The fusion and registration operations are performed alternatively simplifying the underlying optimization problem. The interest of the joint fusion and registration is analyzed using synthetic and experimental phantom images