18,757 research outputs found
Expected exponential loss for gaze-based video and volume ground truth annotation
Many recent machine learning approaches used in medical imaging are highly
reliant on large amounts of image and ground truth data. In the context of
object segmentation, pixel-wise annotations are extremely expensive to collect,
especially in video and 3D volumes. To reduce this annotation burden, we
propose a novel framework to allow annotators to simply observe the object to
segment and record where they have looked at with a \$200 eye gaze tracker. Our
method then estimates pixel-wise probabilities for the presence of the object
throughout the sequence from which we train a classifier in semi-supervised
setting using a novel Expected Exponential loss function. We show that our
framework provides superior performances on a wide range of medical image
settings compared to existing strategies and that our method can be combined
with current crowd-sourcing paradigms as well.Comment: 9 pages, 5 figues, MICCAI 2017 - LABELS Worksho
Estimation of vector fields in unconstrained and inequality constrained variational problems for segmentation and registration
Vector fields arise in many problems of computer vision, particularly in non-rigid registration. In this paper, we develop coupled partial differential equations (PDEs) to estimate vector fields that define the deformation between
objects, and the contour or surface that defines the segmentation of the objects as well.We also explore the utility of inequality constraints applied to variational problems in vision such as estimation of deformation fields in non-rigid registration and tracking. To solve inequality constrained vector
field estimation problems, we apply tools from the Kuhn-Tucker theorem in optimization theory. Our technique differs from recently popular joint segmentation and registration algorithms, particularly in its coupled set of PDEs derived from the same set of energy terms for registration and
segmentation. We present both the theory and results that demonstrate our approach
Segmentation of Three-dimensional Images with Parametric Active Surfaces and Topology Changes
In this paper, we introduce a novel parametric method for segmentation of
three-dimensional images. We consider a piecewise constant version of the
Mumford-Shah and the Chan-Vese functionals and perform a region-based
segmentation of 3D image data. An evolution law is derived from energy
minimization problems which push the surfaces to the boundaries of 3D objects
in the image. We propose a parametric scheme which describes the evolution of
parametric surfaces. An efficient finite element scheme is proposed for a
numerical approximation of the evolution equations. Since standard parametric
methods cannot handle topology changes automatically, an efficient method is
presented to detect, identify and perform changes in the topology of the
surfaces. One main focus of this paper are the algorithmic details to handle
topology changes like splitting and merging of surfaces and change of the genus
of a surface. Different artificial images are studied to demonstrate the
ability to detect the different types of topology changes. Finally, the
parametric method is applied to segmentation of medical 3D images
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