The Haar Wavelet Transform of a Dendrogram: Additional Notes

We consider the wavelet transform of a finite, rooted, node-ranked, $p$-way tree, focusing on the case of binary ($p = 2$) trees. We study a Haar wavelet transform on this tree. Wavelet transforms allow for multiresolution analysis through translation and dilation of a wavelet function. We explore how this works in our tree context.Comment: 37 pp, 1 fig. Supplementary material to "The Haar Wavelet Transform of a Dendrogram", http://arxiv.org/abs/cs.IR/060810

Drawing Binary Tanglegrams: An Experimental Evaluation

A binary tanglegram is a pair of binary trees whose leaf sets are in one-to-one correspondence; matching leaves are connected by inter-tree edges. For applications, for example in phylogenetics or software engineering, it is required that the individual trees are drawn crossing-free. A natural optimization problem, denoted tanglegram layout problem, is thus to minimize the number of crossings between inter-tree edges. The tanglegram layout problem is NP-hard and is currently considered both in application domains and theory. In this paper we present an experimental comparison of a recursive algorithm of Buchin et al., our variant of their algorithm, the algorithm hierarchy sort of Holten and van Wijk, and an integer quadratic program that yields optimal solutions.Comment: see http://www.siam.org/proceedings/alenex/2009/alx09_011_nollenburgm.pd

Derivation Lengths Classification of G\"odel's T Extending Howard's Assignment

Let T be Goedel's system of primitive recursive functionals of finite type in the lambda formulation. We define by constructive means using recursion on nested multisets a multivalued function I from the set of terms of T into the set of natural numbers such that if a term a reduces to a term b and if a natural number I(a) is assigned to a then a natural number I(b) can be assigned to b such that I(a) is greater than I(b). The construction of I is based on Howard's 1970 ordinal assignment for T and Weiermann's 1996 treatment of T in the combinatory logic version. As a corollary we obtain an optimal derivation length classification for the lambda formulation of T and its fragments. Compared with Weiermann's 1996 exposition this article yields solutions to several non-trivial problems arising from dealing with lambda terms instead of combinatory logic terms. It is expected that the methods developed here can be applied to other higher order rewrite systems resulting in new powerful termination orderings since T is a paradigm for such systems

Wellordering proofs for metapredicative Mahlo

In this article we provide wellordering proofs for metapredicative systems of explicit mathematics and admissible set theory featuring suitable axioms about the Mahloness of the underlying universe of discourse. In particular, it is shown that in the corresponding theories EMA of explicit mathematics and KPm0 of admissible set theory, transfinite induction along initial segments of the ordinal φω00, for φ being a ternary Veblen function, is derivable. This reveals that the upper bounds given for these two systems in the paper Jäger and Strahm [11] are indeed shar