20,313 research outputs found

    Process Makna - A Semantic Wiki for Scientific Workflows

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    Virtual e-Science infrastructures supporting Web-based scientific workflows are an example for knowledge-intensive collaborative and weakly-structured processes where the interaction with the human scientists during process execution plays a central role. In this paper we propose the lightweight dynamic user-friendly interaction with humans during execution of scientific workflows via the low-barrier approach of Semantic Wikis as an intuitive interface for non-technical scientists. Our Process Makna Semantic Wiki system is a novel combination of a business process management system adapted for scientific workflows with a Corporate Semantic Web Wiki user interface supporting knowledge intensive human interaction tasks during scientific workflow execution

    A Scientific Workflow System For Genomic Data Analysis

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    Scientific workflows have become increasingly popular as a new computing paradigm for scientists to design and execute complex and distributed scientific processes to enable and accelerate many scientific discoveries. Although several scientific workflow management systems (SWFMSs) have been developed, there is a great need for an integrated scientific workflow system that enables the design and execution of higher-level scientific workflows, which integrate heterogeneous scientific workflows enacted by existing SWFMSs. On one hand, science is becoming increasingly collaborative today, requiring an integrated solution that combines the features and capabilities of different SWFMSs, which are typically developed and optimized towards one single discipline. One the other hand, such an integrated environment can immediately leverage existing and emerging techniques and strengths of various SWFMSs and their supported execution environments, such as Cluster, Grid, and Cloud. The main contributions of this dissertation are: 1) We propose a scientific workflow system, called GENOMEFLOW, to design, develop, and execute higher-level scientific workflows, whose workflow tasks are themselves scientific workflows enacted by existing SWFMSs; 2) We propose a workflow scheduling algorithm, called GSA, to enable the parallel execution of such heterogeneous scientific workflows in their native heterogeneous environments; and 3) We implemented GENOMEFLOW towards the life science community and developed several GENOMEFLOW scientific workflows to demonstrate the capabilities of our system for genome data analysis applications

    weSPOT: a cloud-based approach for personal and social inquiry

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    Scientific inquiry is at the core of the curricula of schools and universities across Europe. weSPOT is a new European initiative proposing a cloud-based approach for personal and social inquiry. weSPOT aims at enabling students to create their mashups out of cloud-based tools in order to perform scientific investigations. Students will also be able to share their inquiry accomplishments in social networks and receive feedback from the learning environment and their peers

    weSPOT: A personal and social approach to inquiry-based learning

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    weSPOT is a new European initiative proposing a novel approach for personal and social inquiry-based learning in secondary and higher education. weSPOT aims at enabling students to create their mash-ups out of cloud based tools and services in order to perform scientific investigations. Students will also be able to share their inquiry accomplishments in social networks and receive feedback from the learning environment and their peers. This paper presents the research framework of the weSPOT project, as well as the initial inquiry-based learning scenarios that will be piloted by the project in real-life educational settings
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