Minas: Memory Affinity Management Framework

In this document, we introduce Minas, a memory affinity management framework for cache-coherent NUMA Non-Uniform Memory Access) platforms, which provides either explicit memory affinity management or automatic one with efficiency and architecture abstraction for numerical scientic applications. The explicit tuning is based on an API called MAi (Memory Affinity interface) which provides simple functions to manage allocation and data placement using an extensive set of memory policies. An automatic tuning mechanism is provided by the preprocessor named MApp (Memory Anity preprocessor). MApp analyses both the application source code and the target cache-coherent NUMA platform characteristics in order to automatically apply MAi functions at compile time. Minas efficiency and architecture abstraction have been evaluated on two cache-coherent NUMA platforms using three numerical scientic HPC applications. The results have shown signicant gains when compared to other solutions available on Linux (First-touch, libnuma and numactl)

Computing infrastructure issues in distributed communications systems : a survey of operating system transport system architectures

The performance of distributed applications (such as file transfer, remote login, tele-conferencing, full-motion video, and scientific visualization) is influenced by several factors that interact in complex ways. In particular, application performance is significantly affected both by communication infrastructure factors and computing infrastructure factors. Several communication infrastructure factors include channel speed, bit-error rate, and congestion at intermediate switching nodes. Computing infrastructure factors include (among other things) both protocol processing activities (such as connection management, flow control, error detection, and retransmission) and general operating system factors (such as memory latency, CPU speed, interrupt and context switching overhead, process architecture, and message buffering). Due to a several orders of magnitude increase in network channel speed and an increase in application diversity, performance bottlenecks are shifting from the network factors to the transport system factors.This paper defines an abstraction called an "Operating System Transport System Architecture" (OSTSA) that is used to classify the major components and services in the computing infrastructure. End-to-end network protocols such as TCP, TP4, VMTP, XTP, and Delta-t typically run on general-purpose computers, where they utilize various operating system resources such as processors, virtual memory, and network controllers. The OSTSA provides services that integrate these resources to support distributed applications running on local and wide area networks.A taxonomy is presented to evaluate OSTSAs in terms of their support for protocol processing activities. We use this taxonomy to compare and contrast five general-purpose commercial and experimental operating systems including System V UNIX, BSD UNIX, the x-kernel, Choices, and Xinu

Cache Equalizer: A Cache Pressure Aware Block Placement Scheme for Large-Scale Chip Multiprocessors

This paper describes Cache Equalizer (CE), a novel distributed cache management scheme for large scale chip multiprocessors (CMPs). Our work is motivated by large asymmetry in cache sets usages. CE decouples the physical locations of cache blocks from their addresses for the sake of reducing misses caused by destructive interferences. Temporal pressure at the on-chip last-level cache, is continuously collected at a group (comprised of cache sets) granularity, and periodically recorded at the memory controller to guide the placement process. An incoming block is consequently placed at a cache group that exhibits the minimum pressure. CE provides Quality of Service (QoS) by robustly offering better performance than the baseline shared NUCA cache. Simulation results using a full-system simulator demonstrate that CE outperforms shared NUCA caches by an average of 15.5% and by as much as 28.5% for the benchmark programs we examined. Furthermore, evaluations manifested the outperformance of CE versus related CMP cache designs

Accelerator Memory Reuse in the Dark Silicon Era

Accelerators integrated on-die with General-Purpose CPUs (GP-CPUs) can yield significant performance and power improvements. Their extensive use, however, is ultimately limited by their area overhead; due to their high degree of specialization, the opportunity cost of investing die real estate on accelerators can become prohibitive, especially for general-purpose architectures. In this paper we present a novel technique aimed at mitigating this opportunity cost by allowing GP-CPU cores to reuse accelerator memory as a non-uniform cache architecture (NUCA) substrate. On a system with a last level-2 cache of 128kB, our technique achieves on average a 25% performance improvement when reusing four 512 kB accelerator memory blocks to form a level-3 cache. Making these blocks reusable as NUCA slices incurs on average in a 1.89% area overhead with respect to equally-sized ad hoc cache slice

Virtual Machine Support for Many-Core Architectures: Decoupling Abstract from Concrete Concurrency Models

The upcoming many-core architectures require software developers to exploit concurrency to utilize available computational power. Today's high-level language virtual machines (VMs), which are a cornerstone of software development, do not provide sufficient abstraction for concurrency concepts. We analyze concrete and abstract concurrency models and identify the challenges they impose for VMs. To provide sufficient concurrency support in VMs, we propose to integrate concurrency operations into VM instruction sets. Since there will always be VMs optimized for special purposes, our goal is to develop a methodology to design instruction sets with concurrency support. Therefore, we also propose a list of trade-offs that have to be investigated to advise the design of such instruction sets. As a first experiment, we implemented one instruction set extension for shared memory and one for non-shared memory concurrency. From our experimental results, we derived a list of requirements for a full-grown experimental environment for further research

Mixing multi-core CPUs and GPUs for scientific simulation software

Recent technological and economic developments have led to widespread availability of multi-core CPUs and specialist accelerator processors such as graphical processing units (GPUs). The accelerated computational performance possible from these devices can be very high for some applications paradigms. Software languages and systems such as NVIDIA's CUDA and Khronos consortium's open compute language (OpenCL) support a number of individual parallel application programming paradigms. To scale up the performance of some complex systems simulations, a hybrid of multi-core CPUs for coarse-grained parallelism and very many core GPUs for data parallelism is necessary. We describe our use of hybrid applica- tions using threading approaches and multi-core CPUs to control independent GPU devices. We present speed-up data and discuss multi-threading software issues for the applications level programmer and o er some suggested areas for language development and integration between coarse-grained and ne-grained multi-thread systems. We discuss results from three common simulation algorithmic areas including: partial di erential equations; graph cluster metric calculations and random number generation. We report on programming experiences and selected performance for these algorithms on: single and multiple GPUs; multi-core CPUs; a CellBE; and using OpenCL. We discuss programmer usability issues and the outlook and trends in multi-core programming for scienti c applications developers