12,264 research outputs found
Brain Segmentation ? A Case study of Biomedical Cloud Computing for Education and Research
Medical imaging is widely adopted in Hospitals and medical institutes, and new ways to improve existing medical imaging services are regularly exploited. This paper describes the adoption of Cloud Computing is useful for medical education and research, and describes the methodology, results and lesson learned. A working Bioinformatics Cloud platform can demonstrate computation and visualisation of brain imaging. The aim is to study segmentation of brains, which divides the brain into ten major regions. The Cloud platform has these two functions: (i) it can highlight each region for ten different segments; and (ii) it can adjust intensity of segmentation to allow basic study of brain medicine. Two types of benefits are reported as follows. Firstly, all the medical student participants are reported to have 20% improvement in their learning satisfaction. Secondly, 100% of volunteer participants are reported to have positive learning experience
Cloud Storage and Bioinformatics in a private cloud deployment: Lessons for Data Intensive research
This paper describes service portability for a private cloud deployment, including a detailed case study about Cloud Storage and bioinformatics services developed as part of the Cloud Computing Adoption Framework (CCAF). Our Cloud Storage design and deployment is based on Storage Area Network (SAN) technologies, details of which include functionalities, technical implementation, architecture and user support. Experiments for data services (backup automation, data recovery and data migration) are performed and results confirm backup automation is completed swiftly and is reliable for data-intensive research. The data recovery result confirms that execution time is in proportion to quantity of recovered data, but the failure rate increases in an exponential manner. The data migration result confirms execution time is in proportion to disk volume of migrated data, but again the failure rate increases in an exponential manner. In addition, benefits of CCAF are illustrated using several bioinformatics examples such as tumour modelling, brain imaging, insulin molecules and simulations for medical training. Our Cloud Storage solution described here offers cost reduction, time-saving and user friendliness
Hacia el modelado 3d de tumores cerebrales mediante endoneurosonografĂa y redes neuronales
Las cirugĂas mĂnimamente invasivas se han vuelto populares debido a que implican menos riesgos con respecto a las intervenciones tradicionales. En neurocirugĂa, las tendencias recientes sugieren el uso conjunto de la endoscopia y el ultrasonido, tĂ©cnica llamada endoneurosonografĂa (ENS), para la virtualizaciĂłn 3D de las estructuras del cerebro en tiempo real. La informaciĂłn ENS se puede utilizar para generar modelos 3D de los tumores del cerebro durante la cirugĂa. En este trabajo, presentamos una metodologĂa para el modelado 3D de tumores cerebrales con ENS y redes neuronales. EspecĂficamente, se estudiĂł el uso de mapas auto-organizados (SOM) y de redes neuronales tipo gas (NGN). En comparaciĂłn con otras tĂ©cnicas, el modelado 3D usando redes neuronales ofrece ventajas debido a que la morfologĂa del tumor se codifica directamente sobre los pesos sinápticos de la red, no requiere ningĂşn conocimiento a priori y la representaciĂłn puede ser desarrollada en dos etapas: entrenamiento fuera de lĂnea y adaptaciĂłn en lĂnea. Se realizan pruebas experimentales con maniquĂes mĂ©dicos de tumores cerebrales. Al final del documento, se presentan los resultados del modelado 3D a partir de una base de datos ENS.Minimally invasive surgeries have become popular because they reduce the typical risks of traditional interventions. In neurosurgery, recent trends suggest the combined use of endoscopy and ultrasound (endoneurosonography or ENS) for 3D virtualization of brain structures in real time. The ENS information can be used to generate 3D models of brain tumors during a surgery. This paper introduces a methodology for 3D modeling of brain tumors using ENS and unsupervised neural networks. The use of self-organizing maps (SOM) and neural gas networks (NGN) is particularly studied. Compared to other techniques, 3D modeling using neural networks offers advantages, since tumor morphology is directly encoded in synaptic weights of the network, no a priori knowledge is required, and the representation can be developed in two stages: off-line training and on-line adaptation. Experimental tests were performed using virtualized phantom brain tumors. At the end of the paper, the results of 3D modeling from an ENS database are presented
Fog Computing in Medical Internet-of-Things: Architecture, Implementation, and Applications
In the era when the market segment of Internet of Things (IoT) tops the chart
in various business reports, it is apparently envisioned that the field of
medicine expects to gain a large benefit from the explosion of wearables and
internet-connected sensors that surround us to acquire and communicate
unprecedented data on symptoms, medication, food intake, and daily-life
activities impacting one's health and wellness. However, IoT-driven healthcare
would have to overcome many barriers, such as: 1) There is an increasing demand
for data storage on cloud servers where the analysis of the medical big data
becomes increasingly complex, 2) The data, when communicated, are vulnerable to
security and privacy issues, 3) The communication of the continuously collected
data is not only costly but also energy hungry, 4) Operating and maintaining
the sensors directly from the cloud servers are non-trial tasks. This book
chapter defined Fog Computing in the context of medical IoT. Conceptually, Fog
Computing is a service-oriented intermediate layer in IoT, providing the
interfaces between the sensors and cloud servers for facilitating connectivity,
data transfer, and queryable local database. The centerpiece of Fog computing
is a low-power, intelligent, wireless, embedded computing node that carries out
signal conditioning and data analytics on raw data collected from wearables or
other medical sensors and offers efficient means to serve telehealth
interventions. We implemented and tested an fog computing system using the
Intel Edison and Raspberry Pi that allows acquisition, computing, storage and
communication of the various medical data such as pathological speech data of
individuals with speech disorders, Phonocardiogram (PCG) signal for heart rate
estimation, and Electrocardiogram (ECG)-based Q, R, S detection.Comment: 29 pages, 30 figures, 5 tables. Keywords: Big Data, Body Area
Network, Body Sensor Network, Edge Computing, Fog Computing, Medical
Cyberphysical Systems, Medical Internet-of-Things, Telecare, Tele-treatment,
Wearable Devices, Chapter in Handbook of Large-Scale Distributed Computing in
Smart Healthcare (2017), Springe
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