6,086 research outputs found
Improve the performance of transfer learning without fine-tuning using dissimilarity-based multi-view learning for breast cancer histology images
Breast cancer is one of the most common types of cancer and leading
cancer-related death causes for women. In the context of ICIAR 2018 Grand
Challenge on Breast Cancer Histology Images, we compare one handcrafted feature
extractor and five transfer learning feature extractors based on deep learning.
We find out that the deep learning networks pretrained on ImageNet have better
performance than the popular handcrafted features used for breast cancer
histology images. The best feature extractor achieves an average accuracy of
79.30%. To improve the classification performance, a random forest
dissimilarity based integration method is used to combine different feature
groups together. When the five deep learning feature groups are combined, the
average accuracy is improved to 82.90% (best accuracy 85.00%). When handcrafted
features are combined with the five deep learning feature groups, the average
accuracy is improved to 87.10% (best accuracy 93.00%)
Hierarchical ResNeXt Models for Breast Cancer Histology Image Classification
Microscopic histology image analysis is a cornerstone in early detection of
breast cancer. However these images are very large and manual analysis is error
prone and very time consuming. Thus automating this process is in high demand.
We proposed a hierarchical system of convolutional neural networks (CNN) that
classifies automatically patches of these images into four pathologies: normal,
benign, in situ carcinoma and invasive carcinoma. We evaluated our system on
the BACH challenge dataset of image-wise classification and a small dataset
that we used to extend it. Using a train/test split of 75%/25%, we achieved an
accuracy rate of 0.99 on the test split for the BACH dataset and 0.96 on that
of the extension. On the test of the BACH challenge, we've reached an accuracy
of 0.81 which rank us to the 8th out of 51 teams
Few Shot Learning in Histopathological Images:Reducing the Need of Labeled Data on Biological Datasets
Although deep learning pathology diagnostic algorithms are proving comparable results with human experts in a wide variety of tasks, they still require a huge amount of well annotated data for training. Generating such extensive and well labelled datasets is time consuming and is not feasible for certain tasks and so, most of the medical datasets available are scarce in images and therefore, not enough for training. In this work we validate that the use of few shot learning techniques can transfer knowledge from a well defined source domain from Colon tissue into a more generic domain composed by Colon, Lung and Breast tissue by using very few training images. Our results show that our few-shot approach is able to obtain a balanced accuracy (BAC) of 90% with just 60 training images, even for the Lung and Breast tissues that were not present on the training set. This outperforms the finetune transfer learning approach that obtains 73% BAC with 60 images and requires 600 images to get up to 81% BAC.This study has received funding from the European
Union’s Horizon 2020 research and innovation programme
under grant agreement No. 732111 (PICCOLO project)
Machine learning methods for histopathological image analysis
Abundant accumulation of digital histopathological images has led to the
increased demand for their analysis, such as computer-aided diagnosis using
machine learning techniques. However, digital pathological images and related
tasks have some issues to be considered. In this mini-review, we introduce the
application of digital pathological image analysis using machine learning
algorithms, address some problems specific to such analysis, and propose
possible solutions.Comment: 23 pages, 4 figure
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