Independent component analysis (ICA) applied to ultrasound image processing and tissue characterization

As a complicated ubiquitous phenomenon encountered in ultrasound imaging, speckle can be treated as either annoying noise that needs to be reduced or the source from which diagnostic information can be extracted to reveal the underlying properties of tissue. In this study, the application of Independent Component Analysis (ICA), a relatively new statistical signal processing tool appeared in recent years, to both the speckle texture analysis and despeckling problems of B-mode ultrasound images was investigated. It is believed that higher order statistics may provide extra information about the speckle texture beyond the information provided by first and second order statistics only. However, the higher order statistics of speckle texture is still not clearly understood and very difficult to model analytically. Any direct dealing with high order statistics is computationally forbidding. On the one hand, many conventional ultrasound speckle texture analysis algorithms use only first or second order statistics. On the other hand, many multichannel filtering approaches use pre-defined analytical filters which are not adaptive to the data. In this study, an ICA-based multichannel filtering texture analysis algorithm, which considers both higher order statistics and data adaptation, was proposed and tested on the numerically simulated homogeneous speckle textures. The ICA filters were learned directly from the training images. Histogram regularization was conducted to make the speckle images quasi-stationary in the wide sense so as to be adaptive to an ICA algorithm. Both Principal Component Analysis (PCA) and a greedy algorithm were used to reduce the dimension of feature space. Finally, Support Vector Machines (SVM) with Radial Basis Function (RBF) kernel were chosen as the classifier for achieving best classification accuracy. Several representative conventional methods, including both low and high order statistics based methods, and both filtering and non-filtering methods, have been chosen for comparison study. The numerical experiments have shown that the proposed ICA-based algorithm in many cases outperforms other algorithms for comparison. Two-component texture segmentation experiments were conducted and the proposed algorithm showed strong capability of segmenting two visually very similar yet different texture regions with rather fuzzy boundaries and almost the same mean and variance. Through simulating speckle with first order statistics approaching gradually to the Rayleigh model from different non-Rayleigh models, the experiments to some extent reveal how the behavior of higher order statistics changes with the underlying property of tissues. It has been demonstrated that when the speckle approaches the Rayleigh model, both the second and higher order statistics lose the texture differentiation capability. However, when the speckles tend to some non-Rayleigh models, methods based on higher order statistics show strong advantage over those solely based on first or second order statistics. The proposed algorithm may potentially find clinical application in the early detection of soft tissue disease, and also be helpful for better understanding ultrasound speckle phenomenon in the perspective of higher order statistics. For the despeckling problem, an algorithm was proposed which adapted the ICA Sparse Code Shrinkage (ICA-SCS) method for the ultrasound B-mode image despeckling problem by applying an appropriate preprocessing step proposed by other researchers. The preprocessing step makes the speckle noise much closer to the real white Gaussian noise (WGN) hence more amenable to a denoising algorithm such as ICS-SCS that has been strictly designed for additive WGN. A discussion is given on how to obtain the noise-free training image samples in various ways. The experimental results have shown that the proposed method outperforms several classical methods chosen for comparison, including first or second order statistics based methods (such as Wiener filter) and multichannel filtering methods (such as wavelet shrinkage), in the capability of both speckle reduction and edge preservation

CES-513 Stages for Developing Control Systems using EMG and EEG Signals: A survey

Bio-signals such as EMG (Electromyography), EEG (Electroencephalography), EOG (Electrooculogram), ECG (Electrocardiogram) have been deployed recently to develop control systems for improving the quality of life of disabled and elderly people. This technical report aims to review the current deployment of these state of the art control systems and explain some challenge issues. In particular, the stages for developing EMG and EEG based control systems are categorized, namely data acquisition, data segmentation, feature extraction, classification, and controller. Some related Bio-control applications are outlined. Finally a brief conclusion is summarized.

The Affine Uncertainty Principle, Associated Frames and Applications in Signal Processing

Uncertainty relations play a prominent role in signal processing, stating that a signal can not be simultaneously concentrated in the two related domains of the corresponding phase space. In particular, a new uncertainty principle for the affine group, which is directly related to the wavelet transform has lead to a new minimizing waveform. In this thesis, a frame construction is proposed which leads to approximately tight frames based on this minimizing waveform. Frame properties such as the diagonality of the frame operator as well as lower and upper frame bounds are analyzed. Additionally, three applications of such frame constructions are introduced: inpainting of missing audio data, detection of neuronal spikes in extracellular recorded data and peak detection in MALDI imaging data

Voice Activity Detection and Garbage Modelling for a Mobile Automatic Speech Recognition Application

Recently, state-of-the-art automatic speech recognition systems are used in various industries all over the world. Most of them are using a customized version of speech recognition system. The need for different versions arise due to different speech commands, lexicon, language and distinct work environment. It is essential for a speech recognizer to provide accurate and precise outputs in every working environment. However, the performance of a speech recognizer degrades quickly when noise intermingles with a work environment and also when out-of-vocabulary (OOV) words are spoken to the speech recognizer. This thesis consists of three different tasks which improve an automatic speech recognition application for mobile devices. The three tasks include building of a new acoustic model, improving the current voice activity detection and garbage modelling of OOV words. In this thesis, firstly, a Finnish acoustic model is trained for a company called Devoca Oy. The training data was recorded from different warehouse environments to improve the real-world speech recognition accuracy. Secondly, the Gammatone and Gabor features are extracted from the input speech frame to improve the voice activity detection (VAD). These features are applied to the VAD decision module of Pocketsphinx and a new neural-network classifier, to be classified as speech or non-speech. Lastly, a garbage model is developed for the OOV words. This model recognizes the words from outside the grammar and marks them as unknown on the application interface. This thesis evaluates the success of these three tasks with Finnish audio database and reports the overall improvement in the word error rate

Prognostic Approaches Using Transient Monitoring Methods

The utilization of steady state monitoring techniques has become an established means of providing diagnostic and prognostic information regarding both systems and equipment. However, steady state data is not the only, or in some cases, even the best source of information regarding the health and state of a system. Transient data has largely been overlooked as a source of system information due to the additional complexity in analyzing these types of signals. The development for algorithms and techniques to quickly, and intuitively develop generic quantification of deviations a transient signal towards the goal of prognostic predictions has until now, largely been overlooked. By quantifying and trending these shifts, an accurate measure of system heath can be established and utilized by prognostic algorithms. In fact, for some systems the elevated stress levels during transients can provide better, more clear indications of system health than those derived from steady state monitoring. This research is based on the hypothesis that equipment health signals for some failure modes are stronger during transient conditions than during steady-state because transient conditions (e.g. start-up) place greater stress on the equipment for these failure modes. From this it follows that these signals related to the system or equipment health would display more prominent indications of abnormality if one were to know the proper means to identify them. This project seeks to develop methods and conceptual models to monitor transient signals for equipment health. The purpose of this research is to assess if monitoring of transient signals could provide alternate or better indicators of incipient equipment failure prior to steady state signals. The project is focused on identifying methods, both traditional and novel, suitable to implement and test transient model monitoring in both an useful and intuitive way. By means of these techniques, it is shown that the addition information gathered during transient portions of life can be used to either to augment existing steady-state information, or in cases where such information is unavailable, be used as a primary means of developing prognostic models

Time Scale Approach for Chirp Detection

International audienceTwo different approaches for joint detection and estimation of signals embedded in stationary random noise are considered and compared, for the subclass of amplitude and frequency modulated signals. Matched filter approaches are compared to time-frequency and time scale based approaches. Particular attention is paid to the case of the so-called " power-law chirps " , characterized by monomial and polynomial amplitude and frequency functions. As target application, the problem of gravitational waves at interferometric detectors is considered

Medical Diagnosis with Multimodal Image Fusion Techniques

Image Fusion is an effective approach utilized to draw out all the significant information from the source images, which supports experts in evaluation and quick decision making. Multi modal medical image fusion produces a composite fused image utilizing various sources to improve quality and extract complementary information. It is extremely challenging to gather every piece of information needed using just one imaging method. Therefore, images obtained from different modalities are fused Additional clinical information can be gleaned through the fusion of several types of medical image pairings. This study's main aim is to present a thorough review of medical image fusion techniques which also covers steps in fusion process, levels of fusion, various imaging modalities with their pros and cons, and  the major scientific difficulties encountered in the area of medical image fusion. This paper also summarizes the quality assessments fusion metrics. The various approaches used by image fusion algorithms that are presently available in the literature are classified into four broad categories i) Spatial fusion methods ii) Multiscale Decomposition based methods iii) Neural Network based methods and iv) Fuzzy Logic based methods. the benefits and pitfalls of the existing literature are explored and Future insights are suggested. Moreover, this study is anticipated to create a solid platform for the development of better fusion techniques in medical applications

Pattern Recognition

Pattern recognition is a very wide research field. It involves factors as diverse as sensors, feature extraction, pattern classification, decision fusion, applications and others. The signals processed are commonly one, two or three dimensional, the processing is done in real- time or takes hours and days, some systems look for one narrow object class, others search huge databases for entries with at least a small amount of similarity. No single person can claim expertise across the whole field, which develops rapidly, updates its paradigms and comprehends several philosophical approaches. This book reflects this diversity by presenting a selection of recent developments within the area of pattern recognition and related fields. It covers theoretical advances in classification and feature extraction as well as application-oriented works. Authors of these 25 works present and advocate recent achievements of their research related to the field of pattern recognition

Robust speech recognition with spectrogram factorisation

Communication by speech is intrinsic for humans. Since the breakthrough of mobile devices and wireless communication, digital transmission of speech has become ubiquitous. Similarly distribution and storage of audio and video data has increased rapidly. However, despite being technically capable to record and process audio signals, only a fraction of digital systems and services are actually able to work with spoken input, that is, to operate on the lexical content of speech. One persistent obstacle for practical deployment of automatic speech recognition systems is inadequate robustness against noise and other interferences, which regularly corrupt signals recorded in real-world environments. Speech and diverse noises are both complex signals, which are not trivially separable. Despite decades of research and a multitude of different approaches, the problem has not been solved to a sufficient extent. Especially the mathematically ill-posed problem of separating multiple sources from a single-channel input requires advanced models and algorithms to be solvable. One promising path is using a composite model of long-context atoms to represent a mixture of non-stationary sources based on their spectro-temporal behaviour. Algorithms derived from the family of non-negative matrix factorisations have been applied to such problems to separate and recognise individual sources like speech. This thesis describes a set of tools developed for non-negative modelling of audio spectrograms, especially involving speech and real-world noise sources. An overview is provided to the complete framework starting from model and feature definitions, advancing to factorisation algorithms, and finally describing different routes for separation, enhancement, and recognition tasks. Current issues and their potential solutions are discussed both theoretically and from a practical point of view. The included publications describe factorisation-based recognition systems, which have been evaluated on publicly available speech corpora in order to determine the efficiency of various separation and recognition algorithms. Several variants and system combinations that have been proposed in literature are also discussed. The work covers a broad span of factorisation-based system components, which together aim at providing a practically viable solution to robust processing and recognition of speech in everyday situations