OBIA for combining LiDAR and multispectral data to characterize forested areas and land cover in a tropical region

International audiencePrioritizing and designing forest restoration strategies requires an adequate survey to inform on the status (degraded or not) of forest types and the human disturbances over a territory. Very High Spatial Resolution (VHSR) remotely sensed data offers valuable information for performing such survey. We present in this study an OBIA methodology for mapping forest types at risk and land cover in a tropical context (Mayotte Island) combining LiDAR data (1 m pixel), VHSR multispectral images (Spot 5 XS 10 m pixel and orthophotos 0.5 m pixel) and ancillary data (existing thematic information). A Digital Canopy Model (DCM) was derived from LiDAR data and additional information was built from the DCM in order to better take into account the horizontal variability of canopy height: max and high Pass filters (3m x 3m kernel size) and Haralick variance texture image (51m x 51m kernel size). OBIA emerges as a suitable framework for exploiting multisource information during segmentation as well as during the classification process. A precise map (84% total accuracy) was obtained informing on (i) surfaces of forest types (defined according to their structure, i.e. canopy height of forest patches for specific type); (ii) degradation (identified in the heterogeneity of canopy height and presence of eroded areas) and (iii) human disturbances. Improvements can be made when discriminating forest types according to their composition (deciduous, evergreen or mixed), in particular by exploiting a more radiometrically homogenous VHSR multispectral image

Vegetation Dynamics in Ecuador

Global forest cover has suffered a dramatic reduction during recent decades, especially in tropical regions, which is mainly due to human activities caused by enhanced population pressures. Nevertheless, forest ecosystems, especially tropical forests, play an important role in the carbon cycle functioning as carbon stocks and sinks, which is why conservation strategies are of utmost importance respective to ongoing global warming. In South America the highest deforestation rates are observed in Ecuador, but an operational surveillance system for continuous forest monitoring, along with the determination of deforestation rates and the estimation of actual carbon socks is still missing. Therefore, the present investigation provides a functional tool based on remote sensing data to monitor forest stands at local, regional and national scales. To evaluate forest cover and deforestation rates at country level satellite data was used, whereas LiDAR data was utilized to accurately estimate the Above Ground Biomass (AGB; carbon stocks) at catchment level. Furthermore, to provide a cost-effective tool for continuous forest monitoring of the most vulnerable parts, an Unmanned Aerial Vehicle (UAV) was deployed and equipped with various sensors (RBG and multispectral camera). The results showed that in Ecuador total forest cover was reduced by about 24% during the last three decades. Moreover, deforestation rates have increased with the beginning of the new century, especially in the Andean Highland and the Amazon Basin, due to enhanced population pressures and the government supported oil and mining industries, besides illegal timber extractions. The AGB stock estimations at catchment level indicated that most of the carbon is stored in natural ecosystems (forest and páramo; AGB ~98%), whereas areas affected by anthropogenic land use changes (mostly pastureland) lost nearly all their storage capacities (AGB ~2%). Furthermore, the LiDAR data permitted the detection of the forest structure, and therefore the identification of the most vulnerable parts. To monitor these areas, it could be shown that UAVs are useful, particularly when equipped with an RGB camera (AGB correlation: R² > 0.9), because multispectral images suffer saturation of the spectral bands over dense natural forest stands, which results in high overestimations. In summary, the developed operational surveillance systems respective to forest cover at different spatial scales can be implemented in Ecuador to promote conservation/ restoration strategies and to reduce the high deforestation rates. This may also mitigate future greenhouse gas emissions and guarantee functional ecosystem services for local and regional populations

An object-based approach for mapping forest structural types based on low-density LiDAR and multispectral imagery

[EN] Mapping forest structure variables provides important information for the estimation of forest biomass, carbon stocks, pasture suitability or for wildfire risk prevention and control. The optimization of the prediction models of these variables requires an adequate stratification of the forest landscape in order to create specific models for each structural type or strata. This paper aims to propose and validate the use of an object-oriented classification methodology based on low-density LiDAR data (0.5 m−2) available at national level, WorldView-2 and Sentinel-2 multispectral imagery to categorize Mediterranean forests in generic structural types. After preprocessing the data sets, the area was segmented using a multiresolution algorithm, features describing 3D vertical structure were extracted from LiDAR data and spectral and texture features from satellite images. Objects were classified after feature selection in the following structural classes: grasslands, shrubs, forest (without shrubs), mixed forest (trees and shrubs) and dense young forest. Four classification algorithms (C4.5 decision trees, random forest, k-nearest neighbour and support vector machine) were evaluated using cross-validation techniques. The results show that the integration of low-density LiDAR and multispectral imagery provide a set of complementary features that improve the results (90.75% overall accuracy), and the object-oriented classification techniques are efficient for stratification of Mediterranean forest areas in structural- and fuel-related categories. Further work will be focused on the creation and validation of a different prediction model adapted to the various strata.This work was supported by the Spanish Ministerio de Economia y Competitividad and FEDER under [grant number CGL2013-46387-C2-1-R]; Fondo de Garantia Juvenil under [contract number PEJ-2014-A-45358].Ruiz Fernández, LÁ.; Recio Recio, JA.; Crespo-Peremarch, P.; Sapena, M. (2018). An object-based approach for mapping forest structural types based on low-density LiDAR and multispectral imagery. Geocarto International. 33(5):443-457. https://doi.org/10.1080/10106049.2016.1265595S44345733

Remote Sensing of Ecology, Biodiversity and Conservation: A Review from the Perspective of Remote Sensing Specialists

Remote sensing, the science of obtaining information via noncontact recording, has swept the fields of ecology, biodiversity and conservation (EBC). Several quality review papers have contributed to this field. However, these papers often discuss the issues from the standpoint of an ecologist or a biodiversity specialist. This review focuses on the spaceborne remote sensing of EBC from the perspective of remote sensing specialists, i.e., it is organized in the context of state-of-the-art remote sensing technology, including instruments and techniques. Herein, the instruments to be discussed consist of high spatial resolution, hyperspectral, thermal infrared, small-satellite constellation, and LIDAR sensors; and the techniques refer to image classification, vegetation index (VI), inversion algorithm, data fusion, and the integration of remote sensing (RS) and geographic information system (GIS)

Quantification of a continuous-cover forest in Sweden using remote sensing techniques

Mapping and quantifying forest information about e.g. land cover, tree height and biomass has traditionally been a both time-consuming and labour-intensive part of forestry and forest research as field measurements typically are collected manually using handheld equipment. Remote sensing has proved to be a valuable complement to field based measurements as it enables for fast and relatively cheap collection of data from areas that would be hard to access from the ground. The aim of this thesis was to map and quantify the Romperöd forest outside Glimåkra in southern Sweden where selective thinning forestry has been practised since the 1960’s. The study was carried out using high resolution multispectral aerial images and small-footprint discrete-return LiDAR data included in the Swedish national elevation model in conjunction with field measurements. The results revealed a mixed forest where Norway spruce was the most dominating tree species, accounting for 40.2 % of the total coverage of the study area, followed by Scots pine (13.8 %), broadleaved trees (8.7 %), succession (6.7 %) and bare-ground (4.1 %). The elevation of the terrain varies between 76.2 and 107.3 meters above sea level, with a ridge extending from south to north. The canopy height of the forest varies greatly throughout the study area and ranged between 1.0 and 34.6 m with an average height of 15.1 m and a standard deviation of 8 m. Above-ground biomass (AGB) was estimated by fitting a multiple regression model to LiDAR-derived vegetation metrics (independent variables) and AGB estimates based on field measurements (dependent variable). The model managed to explain 70 % of the variability in the field measured AGB estimates and was applied to the entire study area yielding an average AGB of 122 900 kg/ha and a standard deviation of 50 497 kg/ha. The inclusion of remote sensing data improved the AGB estimates compared to those based solely on field measurements. The results were compared to the AGB data included in the SLU Forest Map which showed low correlation with AGB estimates based on field measurements (adjusted R2: 0.14), proving it unsuitable for the part of the Romperöd forest characterized by selective thinning.Att karlägga och kvantifiera skogsinformation angående exempelvis marktäcke, terräng, trädhöjder och volym är en traditionellt både tidskrävande och dyr del av skogsbruk och forskning eftersom mätningar vanligtvis samlas in i fält med handhållna instrument. Fjärranalys har visat sig vara ett värdefullt komplement till fältbaserade mätningar eftersom det möjliggör för snabb och relativt billig insamling av data från områden som skulle vara svåra att besöka i fält. Syftet med denna uppsats var att kartlägga och kvantifiera Romperödskogen utanför Glimåkra i nordöstra Skåne där blädningsskogsbruk har praktiserats sedan 1960-talet. Studien genomfördes med hjälp av fjärranalysdata i kombination med mätdata som samlats in i fält och blottlade en blandskog där gran utgör det dominerande trädslaget (40,2 % av studieområdet), följt av tall (13,8 %), lövträd (8,7 %), föryngringar (6,7 %) och bar mark (4,1 %). Terrängen varierar från 76,2 till 107,3 meter över havet med en ås som sträcker sig från söder till norr. Höjden på krontaket är heterogent i hela studieområdet och varierar mellan 1,0 och 34,6 m med en medelhöjd på 15,1 m och en standardavikelse på 8 m. Biomassa ovan jord uppskattades för hela studieområdet och visade ett genomsnitt på 122 900 kg/ha med en standardavikelse på 50 497 kg. Resultaten jämfördes med biomassa ovan jord enligt SLUs Skogskarta som visade låg överensstämmelse med skattningar baserade på fältmätningar vilket visar att SLU:s Skogskarta ej är applicerbar för den del av Romperödskogen som kännetecknas av blädning. Den föreslagna metodiken kan användas för att planera skogsbruk eller för att studera framtida förändringar eller störningar i skogen. Resultaten kan även vara till hjälp vid framtida forskning angående Romperödskogen och dess kolutbyte med atmosfären då biomassa ovan jord direkt kan konverteras till kolförråd, vilket är ett viktigt steg för att kunna studera effekten blädningsskogsbruk har på kolcykeln i skogen

Fire models and methods to map fuel types: The role of remote sensing.

Understanding fire is essential to improving forest management strategies. More specifically, an accurate knowledge of the spatial distribution of fuels is critical when analyzing, modelling and predicting fire behaviour. First, we review the main concepts and terminology associated with forest fuels and a number of fuel type classifications. Second, we summarize the main techniques employed to map fuel types starting with the most traditional approaches, such as field work, aerial photo interpretation or ecological modelling. We pay special attention to more contemporary techniques, which involve the use of remote sensing systems. In general, remote sensing systems are low-priced, can be regularly updated and are less time-consuming than traditional methods, but they are still facing important limitations. Recent work has shown that the integration of different sources of information andmethods in a complementary way helps to overcome most of these limitations. Further research is encouraged to develop novel and enhanced remote sensing techniques

Ash Tree Identification Based on the Integration of Hyperspectral Imagery and High-density Lidar Data

Monitoring and management of ash trees has become particularly important in recent years due to the heightened risk of attack from the invasive pest, the emerald ash borer (EAB). However, distinguishing ash from other deciduous trees can be challenging. Both hyperspectral imagery and Light detection and ranging (LiDAR) data are two valuable data sources that are often used for tree species classification. Hyperspectral imagery measures detailed spectral reflectance related to the biochemical properties of vegetation, while LiDAR data measures the three-dimensional structure of tree crowns related to morphological characteristics. Thus, the accuracy of vegetation classification may be improved by combining both techniques. Therefore, the objective of this research is to integrate hyperspectral imagery and LiDAR data for improving ash tree identification. Specifically, the research aims include: 1) using LiDAR data for individual tree crowns segmentation; 2) using hyperspectral imagery for extraction of relative pure crown spectra; 3) fusing hyperspectral and LiDAR data for ash tree identification. It is expected that the classification accuracy of ash trees will be significantly improved with the integration of hyperspectral and LiDAR techniques. Analysis results suggest that, first, 3D crown structures of individual trees can be reconstructed using a set of generalized geometric models which optimally matched LiDAR-derived raster image, and crown widths can be further estimated using tree height and shape-related parameters as independent variables and ground measurement of crown widths as dependent variables. Second, with constrained linear spectral mixture analysis method, the fractions of all materials within a pixel can be extracted, and relative pure crown-scale spectra can be further calculated using illuminated-leaf fraction as weighting factors for tree species classification. Third, both crown shape index (SI) and coefficient of variation (CV) can be extracted from LiDAR data as invariant variables in tree’s life cycle, and improve ash tree identification by integrating with pixel-weighted crown spectra. Therefore, three major contributions of this research have been made in the field of tree species classification:1) the automatic estimation of individual tree crown width from LiDAR data by combining a generalized geometric model and a regression model, 2) the computation of relative pure crown-scale spectral reflectance using a pixel-weighting algorithm for tree species classification, 3) the fusion of shape-related structural features and pixel-weighted crown-scale spectral features for improving of ash tree identification

Assessing the role of EO in biodiversity monitoring: options for integrating in-situ observations with EO within the context of the EBONE concept

The European Biodiversity Observation Network (EBONE) is a European contribution on terrestrial monitoring to GEO BON, the Group on Earth Observations Biodiversity Observation Network. EBONE’s aims are to develop a system of biodiversity observation at regional, national and European levels by assessing existing approaches in terms of their validity and applicability starting in Europe, then expanding to regions in Africa. The objective of EBONE is to deliver: 1. A sound scientific basis for the production of statistical estimates of stock and change of key indicators; 2. The development of a system for estimating past changes and forecasting and testing policy options and management strategies for threatened ecosystems and species; 3. A proposal for a cost-effective biodiversity monitoring system. There is a consensus that Earth Observation (EO) has a role to play in monitoring biodiversity. With its capacity to observe detailed spatial patterns and variability across large areas at regular intervals, our instinct suggests that EO could deliver the type of spatial and temporal coverage that is beyond reach with in-situ efforts. Furthermore, when considering the emerging networks of in-situ observations, the prospect of enhancing the quality of the information whilst reducing cost through integration is compelling. This report gives a realistic assessment of the role of EO in biodiversity monitoring and the options for integrating in-situ observations with EO within the context of the EBONE concept (cfr. EBONE-ID1.4). The assessment is mainly based on a set of targeted pilot studies. Building on this assessment, the report then presents a series of recommendations on the best options for using EO in an effective, consistent and sustainable biodiversity monitoring scheme. The issues that we faced were many: 1. Integration can be interpreted in different ways. One possible interpretation is: the combined use of independent data sets to deliver a different but improved data set; another is: the use of one data set to complement another dataset. 2. The targeted improvement will vary with stakeholder group: some will seek for more efficiency, others for more reliable estimates (accuracy and/or precision); others for more detail in space and/or time or more of everything. 3. Integration requires a link between the datasets (EO and in-situ). The strength of the link between reflected electromagnetic radiation and the habitats and their biodiversity observed in-situ is function of many variables, for example: the spatial scale of the observations; timing of the observations; the adopted nomenclature for classification; the complexity of the landscape in terms of composition, spatial structure and the physical environment; the habitat and land cover types under consideration. 4. The type of the EO data available varies (function of e.g. budget, size and location of region, cloudiness, national and/or international investment in airborne campaigns or space technology) which determines its capability to deliver the required output. EO and in-situ could be combined in different ways, depending on the type of integration we wanted to achieve and the targeted improvement. We aimed for an improvement in accuracy (i.e. the reduction in error of our indicator estimate calculated for an environmental zone). Furthermore, EO would also provide the spatial patterns for correlated in-situ data. EBONE in its initial development, focused on three main indicators covering: (i) the extent and change of habitats of European interest in the context of a general habitat assessment; (ii) abundance and distribution of selected species (birds, butterflies and plants); and (iii) fragmentation of natural and semi-natural areas. For habitat extent, we decided that it did not matter how in-situ was integrated with EO as long as we could demonstrate that acceptable accuracies could be achieved and the precision could consistently be improved. The nomenclature used to map habitats in-situ was the General Habitat Classification. We considered the following options where the EO and in-situ play different roles: using in-situ samples to re-calibrate a habitat map independently derived from EO; improving the accuracy of in-situ sampled habitat statistics, by post-stratification with correlated EO data; and using in-situ samples to train the classification of EO data into habitat types where the EO data delivers full coverage or a larger number of samples. For some of the above cases we also considered the impact that the sampling strategy employed to deliver the samples would have on the accuracy and precision achieved. Restricted access to European wide species data prevented work on the indicator ‘abundance and distribution of species’. With respect to the indicator ‘fragmentation’, we investigated ways of delivering EO derived measures of habitat patterns that are meaningful to sampled in-situ observations