59 research outputs found
Improving Receiver Performance of Diffusive Molecular Communication with Enzymes
This paper studies the mitigation of intersymbol interference in a diffusive
molecular communication system using enzymes that freely diffuse in the
propagation environment. The enzymes form reaction intermediates with
information molecules and then degrade them so that they cannot interfere with
future transmissions. A lower bound expression on the expected number of
molecules measured at the receiver is derived. A simple binary receiver
detection scheme is proposed where the number of observed molecules is sampled
at the time when the maximum number of molecules is expected. Insight is also
provided into the selection of an appropriate bit interval. The expected bit
error probability is derived as a function of the current and all previously
transmitted bits. Simulation results show the accuracy of the bit error
probability expression and the improvement in communication performance by
having active enzymes present.Comment: 13 pages, 8 figures, 1 table. To appear in IEEE Transactions on
Nanobioscience (submitted January 22, 2013; minor revision October 16, 2013;
accepted December 4, 2013
A Unifying Model for External Noise Sources and ISI in Diffusive Molecular Communication
This paper considers the impact of external noise sources, including
interfering transmitters, on a diffusive molecular communication system, where
the impact is measured as the number of noise molecules expected to be observed
at a passive receiver. A unifying model for noise, multiuser interference, and
intersymbol interference is presented, where, under certain circumstances,
interference can be approximated as a noise source that is emitting
continuously. The model includes the presence of advection and molecule
degradation. The time-varying and asymptotic impact is derived for a series of
special cases, some of which facilitate closed-form solutions. Simulation
results show the accuracy of the expressions derived for the impact of a
continuously-emitting noise source, and show how approximating intersymbol
interference as a noise source can simplify the calculation of the expected bit
error probability of a weighted sum detector.Comment: 14 pages, 7 figures, 4 tables, 1 appendix. To appear in IEEE Journal
on Selected Areas in Communications (JSAC). Submitted October 21, 2013,
revised April 21, 2014, accepted June 3, 201
Optimal Receiver Design for Diffusive Molecular Communication With Flow and Additive Noise
In this paper, we perform receiver design for a diffusive molecular
communication environment. Our model includes flow in any direction, sources of
information molecules in addition to the transmitter, and enzymes in the
propagation environment to mitigate intersymbol interference. We characterize
the mutual information between receiver observations to show how often
independent observations can be made. We derive the maximum likelihood sequence
detector to provide a lower bound on the bit error probability. We propose the
family of weighted sum detectors for more practical implementation and derive
their expected bit error probability. Under certain conditions, the performance
of the optimal weighted sum detector is shown to be equivalent to a matched
filter. Receiver simulation results show the tradeoff in detector complexity
versus achievable bit error probability, and that a slow flow in any direction
can improve the performance of a weighted sum detector.Comment: 14 pages, 7 figures, 1 appendix. To appear in IEEE Transactions on
NanoBioscience (submitted July 31, 2013, revised June 18, 2014, accepted July
7, 2014
Adaptive Molecule Transmission Rate for Diffusion Based Molecular Communication
In this paper, a simple memory limited transmitter for molecular
communication is proposed, in which information is encoded in the diffusion
rate of the molecules. Taking advantage of memory, the proposed transmitter
reduces the ISI problem by properly adjusting its diffusion rate. The error
probability of the proposed scheme is derived and the result is compared with
the lower bound on error probability of the optimum transmitter. It is shown
that the performance of introduced transmitter is near optimal (under certain
simplifications). Simplicity is the key feature of the presented communication
system: the transmitter follows a simple rule, the receiver is a simple
threshold decoder and only one type of molecule is used to convey the
information
ISI-aware channel code design for molecular communication via diffusion
© 2019 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.In molecular communication via diffusion, information molecules diffusing in the environment are subject to Brownian motion. Due to probabilistic propagation, the arrival of the molecules at the receiver is spread in time, leading to the reception of some molecules belonging to the previous symbol(s) during the upcoming symbol duration. Known as inter-symbol interference (ISI), this problem has been extensively studied in the literature by applying a large spectrum of techniques, mostly inspired by approaches in the wireless communication domain, including channel coding techniques. Unfortunately, many known channel codes do not perform well in the molecular communications domain since the diffusion channel features a significant memory component. In this paper, novel methods for channel coding by incorporating the effect of ISI in the design of the channel codes for the molecular diffusion channel are proposed. The results show that the proposed methods provide significant improvements in performance in terms of the codeword error rate.Postprint (author's final draft
Transmitter and Receiver Architectures for Molecular Communications: A Survey on Physical Design with Modulation, Coding, and Detection Techniques
Inspired by nature, molecular communications (MC), i.e., the use of molecules to encode, transmit, and receive information, stands as the most promising communication paradigm to realize the nanonetworks. Even though there has been extensive theoretical research toward nanoscale MC, there are no examples of implemented nanoscale MC networks. The main reason for this lies in the peculiarities of nanoscale physics, challenges in nanoscale fabrication, and highly stochastic nature of the biochemical domain of envisioned nanonetwork applications. This mandates developing novel device architectures and communication methods compatible with MC constraints. To that end, various transmitter and receiver designs for MC have been proposed in the literature together with numerable modulation, coding, and detection techniques. However, these works fall into domains of a very wide spectrum of disciplines, including, but not limited to, information and communication theory, quantum physics, materials science, nanofabrication, physiology, and synthetic biology. Therefore, we believe it is imperative for the progress of the field that an organized exposition of cumulative knowledge on the subject matter can be compiled. Thus, to fill this gap, in this comprehensive survey, we review the existing literature on transmitter and receiver architectures toward realizing MC among nanomaterial-based nanomachines and/or biological entities and provide a complete overview of modulation, coding, and detection techniques employed for MC. Moreover, we identify the most significant shortcomings and challenges in all these research areas and propose potential solutions to overcome some of them.This work was supported in part by the European Research Council (ERC) Projects MINERVA under Grant ERC-2013-CoG #616922 and MINERGRACE under Grant ERC-2017-PoC #780645
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