Impact of receiver reaction mechanisms on the performance of molecular communication networks

In a molecular communication network, transmitters and receivers communicate by using signalling molecules. At the receivers, the signalling molecules react, via a chain of chemical reactions, to produce output molecules. The counts of output molecules over time is considered to be the output signal of the receiver. This output signal is used to detect the presence of signalling molecules at the receiver. The output signal is noisy due to the stochastic nature of diffusion and chemical reactions. The aim of this paper is to characterise the properties of the output signals for two types of receivers, which are based on two different types of reaction mechanisms. We derive analytical expressions for the mean, variance and frequency properties of these two types of receivers. These expressions allow us to study the properties of these two types of receivers. In addition, our model allows us to study the effect of the diffusibility of the receiver membrane on the performance of the receivers

Information Rates of ASK-Based Molecular Communication in Fluid Media

This paper studies the capacity of molecular communications in fluid media, where the information is encoded in the number of transmitted molecules in a time-slot (amplitude shift keying). The propagation of molecules is governed by random Brownian motion and the communication is in general subject to inter-symbol interference (ISI). We first consider the case where ISI is negligible and analyze the capacity and the capacity per unit cost of the resulting discrete memoryless molecular channel and the effect of possible practical constraints, such as limitations on peak and/or average number of transmitted molecules per transmission. In the case with a constrained peak molecular emission, we show that as the time-slot duration increases, the input distribution achieving the capacity per channel use transitions from binary inputs to a discrete uniform distribution. In this paper, we also analyze the impact of ISI. Crucially, we account for the correlation that ISI induces between channel output symbols. We derive an upper bound and two lower bounds on the capacity in this setting. Using the input distribution obtained by an extended Blahut-Arimoto algorithm, we maximize the lower bounds. Our results show that, over a wide range of parameter values, the bounds are close.Comment: 31 pages, 8 figures, Accepted for publication on IEEE Transactions on Molecular, Biological, and Multi-Scale Communication

A Unifying Model for External Noise Sources and ISI in Diffusive Molecular Communication

This paper considers the impact of external noise sources, including interfering transmitters, on a diffusive molecular communication system, where the impact is measured as the number of noise molecules expected to be observed at a passive receiver. A unifying model for noise, multiuser interference, and intersymbol interference is presented, where, under certain circumstances, interference can be approximated as a noise source that is emitting continuously. The model includes the presence of advection and molecule degradation. The time-varying and asymptotic impact is derived for a series of special cases, some of which facilitate closed-form solutions. Simulation results show the accuracy of the expressions derived for the impact of a continuously-emitting noise source, and show how approximating intersymbol interference as a noise source can simplify the calculation of the expected bit error probability of a weighted sum detector.Comment: 14 pages, 7 figures, 4 tables, 1 appendix. To appear in IEEE Journal on Selected Areas in Communications (JSAC). Submitted October 21, 2013, revised April 21, 2014, accepted June 3, 201

Optimal Receiver Design for Diffusive Molecular Communication With Flow and Additive Noise

In this paper, we perform receiver design for a diffusive molecular communication environment. Our model includes flow in any direction, sources of information molecules in addition to the transmitter, and enzymes in the propagation environment to mitigate intersymbol interference. We characterize the mutual information between receiver observations to show how often independent observations can be made. We derive the maximum likelihood sequence detector to provide a lower bound on the bit error probability. We propose the family of weighted sum detectors for more practical implementation and derive their expected bit error probability. Under certain conditions, the performance of the optimal weighted sum detector is shown to be equivalent to a matched filter. Receiver simulation results show the tradeoff in detector complexity versus achievable bit error probability, and that a slow flow in any direction can improve the performance of a weighted sum detector.Comment: 14 pages, 7 figures, 1 appendix. To appear in IEEE Transactions on NanoBioscience (submitted July 31, 2013, revised June 18, 2014, accepted July 7, 2014