Experimental modulation of capsule size in Cryptococcus neoformans

Experimental modulation of capsule size is an important technique for the study of the virulence of the encapsulated pathogen Cryptococcus neoformans. In this paper, we summarize the techniques available for experimental modulation of capsule size in this yeast and describe improved methods to induce capsule size changes. The response of the yeast to the various stimuli is highly dependent on the cryptococcal strain. A high CO(2) atmosphere and a low iron concentration have been used classically to increase capsule size. Unfortunately, these stimuli are not reliable for inducing capsular enlargement in all strains. Recently we have identified new and simpler conditions for inducing capsule enlargement that consistently elicited this effect. Specifically, we noted that mammalian serum or diluted Sabouraud broth in MOPS buffer pH 7.3 efficiently induced capsule growth. Media that slowed the growth rate of the yeast correlated with an increase in capsule size. Finally, we summarize the most commonly used media that induce capsule growth in C. neoformans

Inadvertent trypan blue staining of posterior capsule during cataract surgery associated with Argentinian flag event

Trypan blue is common in visualizing the anterior capsule during cataract surgery. Inadvertent staining of the posterior capsule during phacoemulsification is a rare complication and there are few reports in the literature. The proposed mechanism of posterior capsule staining in previous reports includes a compromised zonular apparatus or iris retractors facilitating the posterior flow of trypan blue. We report the first case of trypan blue staining of the posterior capsule associated with the “Argentinian flag” sign. In our case, the “Argentinian flag” allowed the trypan blue to seep between the posterior capsule and the lens, staining the anterior surface of the posterior capsule

CapProNet: Deep Feature Learning via Orthogonal Projections onto Capsule Subspaces

In this paper, we formalize the idea behind capsule nets of using a capsule vector rather than a neuron activation to predict the label of samples. To this end, we propose to learn a group of capsule subspaces onto which an input feature vector is projected. Then the lengths of resultant capsules are used to score the probability of belonging to different classes. We train such a Capsule Projection Network (CapProNet) by learning an orthogonal projection matrix for each capsule subspace, and show that each capsule subspace is updated until it contains input feature vectors corresponding to the associated class. We will also show that the capsule projection can be viewed as normalizing the multiple columns of the weight matrix simultaneously to form an orthogonal basis, which makes it more effective in incorporating novel components of input features to update capsule representations. In other words, the capsule projection can be viewed as a multi-dimensional weight normalization in capsule subspaces, where the conventional weight normalization is simply a special case of the capsule projection onto 1D lines. Only a small negligible computing overhead is incurred to train the network in low-dimensional capsule subspaces or through an alternative hyper-power iteration to estimate the normalization matrix. Experiment results on image datasets show the presented model can greatly improve the performance of the state-of-the-art ResNet backbones by $10-20\%$ and that of the Densenet by $5-7\%$ respectively at the same level of computing and memory expenses. The CapProNet establishes the competitive state-of-the-art performance for the family of capsule nets by significantly reducing test errors on the benchmark datasets.Comment: Liheng Zhang, Marzieh Edraki, Guo-Jun Qi. CapProNet: Deep Feature Learning via Orthogonal Projections onto Capsule Subspaces, in Proccedings of Thirty-second Conference on Neural Information Processing Systems (NIPS 2018), Palais des Congr\`es de Montr\'eal, Montr\'eal, Canda, December 3-8, 201

Deletion of the Zinc Transporter Lipoprotein AdcAII Causes Hyperencapsulation of Streptococcus pneumoniae Associated with Distinct Alleles of the Type I Restriction-Modification System.

The capsule is the dominant Streptococcus pneumoniae virulence factor, yet how variation in capsule thickness is regulated is poorly understood. Here, we describe an unexpected relationship between mutation of adcAII, which encodes a zinc uptake lipoprotein, and capsule thickness. Partial deletion of adcAII in three of five capsular serotypes frequently resulted in a mucoid phenotype that biochemical analysis and electron microscopy of the D39 adcAII mutants confirmed was caused by markedly increased capsule thickness. Compared to D39, the hyperencapsulated ΔadcAII mutant strain was more resistant to complement-mediated neutrophil killing and was hypervirulent in mouse models of invasive infection. Transcriptome analysis of D39 and the ΔadcAII mutant identified major differences in transcription of the Sp_0505-0508 locus, which encodes an SpnD39III (ST5556II) type I restriction-modification system and allelic variation of which correlates with capsule thickness. A PCR assay demonstrated close linkage of the SpnD39IIIC and F alleles with the hyperencapsulated ΔadcAII strains. However, transformation of ΔadcAII with fixed SpnD39III alleles associated with normal capsule thickness did not revert the hyperencapsulated phenotype. Half of hyperencapsulated ΔadcAII strains contained the same single nucleotide polymorphism in the capsule locus gene cps2E, which is required for the initiation of capsule synthesis. These results provide further evidence for the importance of the SpnD39III (ST5556II) type I restriction-modification system for modulating capsule thickness and identified an unexpected linkage between capsule thickness and mutation of ΔadcAII Further investigation will be needed to characterize how mutation of adcAII affects SpnD39III (ST5556II) allele dominance and results in the hyperencapsulated phenotype.IMPORTANCE The Streptococcus pneumoniae capsule affects multiple interactions with the host including contributing to colonization and immune evasion. During infection, the capsule thickness varies, but the mechanisms regulating this are poorly understood. We have identified an unsuspected relationship between mutation of adcAII, a gene that encodes a zinc uptake lipoprotein, and capsule thickness. Mutation of adcAII resulted in a striking hyperencapsulated phenotype, increased resistance to complement-mediated neutrophil killing, and increased S. pneumoniae virulence in mouse models of infection. Transcriptome and PCR analysis linked the hyperencapsulated phenotype of the ΔadcAII strain to specific alleles of the SpnD39III (ST5556II) type I restriction-modification system, a system which has previously been shown to affect capsule thickness. Our data provide further evidence for the importance of the SpnD39III (ST5556II) type I restriction-modification system for modulating capsule thickness and identify an unexpected link between capsule thickness and ΔadcAII, further investigation of which could further characterize mechanisms of capsule regulation

Sensor capsule for diagnosis of gastric disorders

Motility and pH sensor capsule is developed to monitor gastric acidity, pressure, and temperature. Capsule does not interfere with digestion. Sensor is capsule which includes pH electrode, Pitran pressure transducer, and thermistor temperature sensor all potted in epoxy and enclosed in high density polyethylene sheath

Ferrofluidic solenoid

An electromechanical actuator for producing mechanical force and/or motion in response to electrical signals is disclosed. The actuator includes a ferromagnetic fluid and a coil which are contained within an elastomeric capsule. Energization of the coil by application of current to a pair of coil electrodes extending through the walls of the elastomeric capsule produces distortion of the capsule, i.e., radial expansion and axial contraction. This distortion is caused by the redistribution of the ferromagnetic fluid within the capsule under the influence of the magnetic field. Variation of the current input will produce corresponding variations in the degree of capsule distortion

The motion of a deforming capsule through a corner

A three-dimensional deformable capsule convected through a square duct with a corner is studied via numerical simulations. We develop an accelerated boundary integral implementation adapted to general geometries and boundary conditions. A global spectral method is adopted to resolve the dynamics of the capsule membrane developing elastic tension according to the neo-Hookean constitutive law and bending moments in an inertialess flow. The simulations show that the trajectory of the capsule closely follows the underlying streamlines independently of the capillary number. The membrane deformability, on the other hand, significantly influences the relative area variations, the advection velocity and the principal tensions observed during the capsule motion. The evolution of the capsule velocity displays a loss of the time-reversal symmetry of Stokes flow due to the elasticity of the membrane. The velocity decreases while the capsule is approaching the corner as the background flow does, reaches a minimum at the corner and displays an overshoot past the corner due to the streamwise elongation induced by the flow acceleration in the downstream branch. This velocity overshoot increases with confinement while the maxima of the major principal tension increase linearly with the inverse of the duct width. Finally, the deformation and tension of the capsule are shown to decrease in a curved corner