An efficient parallel method for mining frequent closed sequential patterns

Mining frequent closed sequential pattern (FCSPs) has attracted a great deal of research attention, because it is an important task in sequences mining. In recently, many studies have focused on mining frequent closed sequential patterns because, such patterns have proved to be more efficient and compact than frequent sequential patterns. Information can be fully extracted from frequent closed sequential patterns. In this paper, we propose an efficient parallel approach called parallel dynamic bit vector frequent closed sequential patterns (pDBV-FCSP) using multi-core processor architecture for mining FCSPs from large databases. The pDBV-FCSP divides the search space to reduce the required storage space and performs closure checking of prefix sequences early to reduce execution time for mining frequent closed sequential patterns. This approach overcomes the problems of parallel mining such as overhead of communication, synchronization, and data replication. It also solves the load balance issues of the workload between the processors with a dynamic mechanism that re-distributes the work, when some processes are out of work to minimize the idle CPU time.Web of Science5174021739

Implementation of an interactive pattern mining framework on electronic health record datasets

Large collections of electronic patient records contain a broad range of clinical information highly relevant for data analysis. However, they are maintained primarily for patient administration, and automated methods are required to extract valuable knowledge for predictive, preventive, personalized and participatory medicine. Sequential pattern mining is a fundamental task in data mining which can be used to find statistically relevant, non-trivial temporal dependencies of events such as disease comorbidities. This works objective is to use this mining technique to identify disease associations based on ICD-9-CM codes data of the entire Taiwanese population obtained from Taiwan’s National Health Insurance Research Database. This thesis reports the development and implementation of the Disease Pattern Miner – a pattern mining framework in a medical domain. The framework was designed as a Web application which can be used to run several state-of-the-art sequence mining algorithms on electronic health records, collect and filter the results to reduce the number of patterns to a meaningful size, and visualize the disease associations as an interactive model in a specific population group. This may be crucial to discover new disease associations and offer novel insights to explain disease pathogenesis. A structured evaluation of the data and models are required before medical data-scientist may use this application as a tool for further research to get a better understanding of disease comorbidities

Mining High Utility Patterns Over Data Streams

Mining useful patterns from sequential data is a challenging topic in data mining. An important task for mining sequential data is sequential pattern mining, which discovers sequences of itemsets that frequently appear in a sequence database. In sequential pattern mining, the selection of sequences is generally based on the frequency/support framework. However, most of the patterns returned by sequential pattern mining may not be informative enough to business people and are not particularly related to a business objective. In view of this, high utility sequential pattern (HUSP) mining has emerged as a novel research topic in data mining recently. The main objective of HUSP mining is to extract valuable and useful sequential patterns from data by considering the utility of a pattern that captures a business objective (e.g., profit, users interest). In HUSP mining, the goal is to find sequences whose utility in the database is no less than a user-specified minimum utility threshold. Nowadays, many applications generate a huge volume of data in the form of data streams. A number of studies have been conducted on mining HUSPs, but they are mainly intended for non-streaming data and thus do not take data stream characteristics into consideration. Mining HUSP from such data poses many challenges. First, it is infeasible to keep all streaming data in the memory due to the high volume of data accumulated over time. Second, mining algorithms need to process the arriving data in real time with one scan of data. Third, depending on the minimum utility threshold value, the number of patterns returned by a HUSP mining algorithm can be large and overwhelms the user. In general, it is hard for the user to determine the value for the threshold. Thus, algorithms that can find the most valuable patterns (i.e., top-k high utility patterns) are more desirable. Mining the most valuable patterns is interesting in both static data and data streams. To address these research limitations and challenges, this dissertation proposes techniques and algorithms for mining high utility sequential patterns over data streams. We work on mining HUSPs over both a long portion of a data stream and a short period of time. We also work on how to efficiently identify the most significant high utility patterns (namely, the top-k high utility patterns) over data streams. In the first part, we explore a fundamental problem that is how the limited memory space can be well utilized to produce high quality HUSPs over the entire data stream. An approximation algorithm, called MAHUSP, is designed which employs memory adaptive mechanisms to use a bounded portion of memory, to efficiently discover HUSPs over the entire data streams. The second part of the dissertation presents a new sliding window-based algorithm to discover recent high utility sequential patterns over data streams. A novel data structure named HUSP-Tree is proposed to maintain the essential information for mining recenT HUSPs. An efficient and single-pass algorithm named HUSP-Stream is proposed to generate recent HUSPs from HUSP-Tree. The third part addresses the problem of top-k high utility pattern mining over data streams. Two novel methods, named T-HUDS and T-HUSP, for finding top-k high utility patterns over a data stream are proposed. T-HUDS discovers top-k high utility itemsets and T-HUSP discovers top-k high utility sequential patterns over a data stream. T-HUDS is based on a compressed tree structure, called HUDS-Tree, that can be used to efficiently find potential top-k high utility itemsets over data streams. T-HUSP incrementally maintains the content of top-k HUSPs in a data stream in a summary data structure, named TKList, and discovers top-k HUSPs efficiently. All of the algorithms are evaluated using both synthetic and real datasets. The performances, including the running time, memory consumption, precision, recall and Fmeasure, are compared. In order to show the effectiveness and efficiency of the proposed methods in reallife applications, the fourth part of this dissertation presents applications of one of the proposed methods (i.e., MAHUSP) to extract meaningful patterns from a real web clickstream dataset and a real biosequence dataset. The utility-based sequential patterns are compared with the patterns in the frequency/support framework. The results show that high utility sequential pattern mining provides meaningful patterns in real-life applications

A study on incremental mining of frequent patterns

Data generated from both the offline and online sources are incremental in nature. Changes in the underlying database occur due to the incremental data. Mining frequent patterns are costly in changing databases, since it requires scanning the database from the start. Thus, mining of growing databases has been a great concern. To mine the growing databases, a new Data Mining technique called Incremental Mining has emerged. The Incremental Mining uses previous mining result to get the desired knowledge by reducing mining costs in terms of time and space. This state of the art paper focuses on Incremental Mining approaches and identifies suitable approaches which are the need of real world problem.Keywords: Data Mining, Frequent Pattern, Incremental Mining, Frequent Pattern Minung, High Utility Mining, Constraint Mining