Clarifying the generic limits of Talbotiella and Hymenostegia (Detarieae, Caesalpinioideae, Leguminosae)

The formal description of four species of Cameroonian forest legume trees new to science has been hampered by uncertainty as to whether their correct generic placement is within Hymenostegia Harms or Talbotiella Baker f. As there has been doubt as to whether these two genera differ from one another, an investigation was undertaken so that the new species could be correctly assigned to genus. Using morphological, molecular and pollen data, our study supports the recognition of Hymenostegia and Talbotiella as distinct genera, consequently the new species are correctly placed in Talbotiella. In addition, our data reveal the extensive heterogeneous nature of Hymenostegia as currently circumscribed and the need to transfer H. breteleri to Talbotiella

Genetic diversity, taxonomy and legumins implications of seed storage protein profiling in Fabaceae

Proteomic evidences can be pivotal to the discovery of new plant proteins and plant relationships, due to the diversity of form it can reveal. Seed storage protein profiles of 20 Fabaceae species: 4 grain - legumes and 16 non-pulses; of 16 genera and 10 tribes were analysed by sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE) to estimate protein content diversity and the possible genetic relatedness.28.3% similarity and 71.7% proteomic polymorphism was scored for the species. The high variability expressed by the lot reflects the genetic diversity amongst Fabaceae population. Dendrogram based on the proteomic data clustered the species into four groups. Aside two species, Albizia lebbeck and Albizia zygia belonging to the tribe Ingeae and those of the tribe Caesalpinieae, the other species clustered with several other non-traditional cohorts resulting in a rearrangement that showed least semblance with phylogenetic relationships based on traditional morphology taxonomic delimitation. The similarity in profiles can be preliminarily forensic for proteins of importance whether for nutritional, industrial or for improvement of existing crops or for entirely new plants as crops. The protein mix, and the resultant relationship based on seed storage proteins instigates a review of erstwhile taxonomic, agricultural and research perspectives for the Fabaceae

Diversity analysis of Moroccan carob ("Ceratonia siliqua" L.) accessions using phenotypic traits and RAPD markers

Diversity analysis of moroccan carob (Ceratonia siliqua L.) accessions using phenotypic traits and RAPD markers. The carob (Ceratonia siliqua L.) is a perennial leguminous (Caesalpinioideae) that grows as an evergreen shrub or tree. It¿s an important component of the Mediterranean vegetation and its adaptation in marginal soils of the Mediterranean regions is important environmentally and economically. Phenotypic and genetic diversity among 10 Ceratonia siliqua accessions coming from different areas of Morocco were studied with morphometric and RAPD approaches. The analysis of discriminative fruit characters showed highly significant differences among these accessions, the closely related ones have a similarity level less than 65%. No molecular studies have been carried out so far on Ceratonia siliqua. To provide markers useful for molecular diversity study of the carob tree, genomic DNA extraction and amplification conditions were finalized and 67 arbitrary primers were screened. 52 of them showed clearly reproducible banding patterns. The analysis of RAPD profiles revealed a high degree of genetic diversity within these carob accessions and enabled each of them to be uniquely fingerprinted. Overall, in our study we note that morphological relationship between carob accessions is deeply different to their molecular relationship. Concerning the distribution of the accessions according to their geographical origin, clustering based on RAPD data revealed a rough distribution of theses accessions. Indeed, Sidi Bou Ottman, Demnate and Essaouira accessions coming from the south of Morocco seem to be linked in the PCA plot. However, two geographically distant accessions, Aïn Sfa and Ouazzane coming from the north (about 700 Km) were clustered with Essaouira and Demanate - Sidi Bou Ottman, respectively.Analyse de la diversité des accessions du caroubier marocain (Ceratonia siliqua L.) utilisant des traits phenotypiques et des marqueurs RAPD. Le caroubier (Ceratonia siliqua L.) est une légumineuse pérenne (Caesalpinioideae), à feuillage persistant et pouvant croître entant qu¿arbrisseau ou arbre. C¿est un composant important de la végétation méditerranéenne et son adaptation aux sols marginaux des régions méditerranéennes est d¿une grande importance écologique et économique. La diversité phénotypique et génétique au sein de 10 accessions de caroubier provenant de différentes régions du Maroc a été étudiée par des approches morphométriques et moléculaires (RAPD). L¿analyse des caractères morphologiques discriminants du fruit a montré des différences hautement significatives au sein des accessions, puisque les apparentées d¿entre elles n¿ont approximativement que 65% de similarité. Jusqu¿à nos jours, aucune étude moléculaire n¿a été entreprise sur Ceratonia siliqua. Pour mettre à disposition des marqueurs utiles pour l¿étude de la diversité moléculaire du caroubier, l¿extraction de l¿ADN génomique et les conditions de l¿amplification ont été mises au point et 67 amorces arbitraires ont été criblées. 52 d¿entre elles ont montré clairement des profils de bandes reproductibles. L¿analyse des profils RAPD a révélé une diversité génétique de haut niveau entre les accessions de caroubier ce qui a permis à chacune d¿elles d¿être distinguée génétiquement de façon singulière. De manière générale, nous avons noté que la relation morphologique entre les accessions du caroubier est profondément différente de leur relation moléculaire. Concernant la distribution des accessions selon leur origine géographique, le regroupement basé sur les données de la RAPD a révélé une distribution grossière. En effet, les provenances de Sidi Bou Ottman, Demnate et Essaouira, originaires du sud de Maroc, semblent être liés par l¿analyse des composantes principales (PCA). Cependant, deux accessions géographiquement distantes, Aïn Sfa et Ouazzane, originaires du Nord (approximativement 700 Kms) ont été liées avec Essaouira et Demanate - Sidi Bou Ottman, respectivement

Phosphorus nutrition of ectomycorrhizal and arbuscular mycorrhizal tree seedlings from a lowland tropical rain forest in Korup National Park, Cameroon

The relationship between mycorrhizal colonisation and phosphorus acquired by seedlings of the arbuscular mycorrhizal tree Oubanguia alata Bak f. (Scytopetalaceae) and the ectomycorrhizal tree Tetraberlinia moreliana Aubr. (Caesalpiniodeae) was evaluated at low and high inorganic phosphorus availability. AM colonisation was positively correlated with phosphorus uptake by O. alata at low, but not at high phosphorus availability. Seedlings growth was positively related to arbuscular mycorrhizal colonisation at both low and high phosphorus availability, suggesting that growth promotion by arbuscular mycorrhizas is not simply related to an increase of phosphorus uptake. In contrast, phosphorus uptake by T. moreliana was correlated with EM colonisation at both low and high phosphorus availability, but there was no relationship between growth and ectomycorrhizal colonisation. Promotion of phosphorus uptake by arbuscular mycorrhizas and ectomycorrhizas at low phosphorus availability is consistent with the co-occurrence of the two types of mycorrhiza in tropical rain forests where available soil phosphorus is low. However, ectomycorrhizal colonisation may also be of advantage where inputs of phosphorus rich litter raise the phosphorus status of the soil, as seen in the groves of ectomycorrhizal trees in Korup National Park, and may be one of the factors reinforcing local dominance by these trees

Resolution of paraphyly in caesalpinioid legumes

The exceptionally large, diverse, and economically important plant family Leguminosae has traditionally comprised three subfamilies, the Caesalpinioideae, Mimosoideae and Papilionoideae. Following a large-scale molecular based phylogenetic analysis in which subfamily Caesalpinioideae was demonstrated to be highly paraphyletic, the number of subfamilies recognised was increased to six, with four new subfamilies being segregated from within the Caesalpinioideae, and the Mimosoideae being subsumed into the redefined Caesalpinioideae (as the mimosoid clade). The Caesalpinioideae, and delimitation of genera therein, has therefore been a key focus of the international legume taxonomic community in recent years. Two of the largest genera in the Caesalpinioideae sensu traditional are Bauhinia and Caesalpinia; the former comprises part of the newly created subfamily Cercidoideae, whilst the latter is retained within the Caesalpinioideae sensu novo. Both Bauhinia and Caesalpinia have historically been most commonly treated as large, pantropical and polymorphic genera, but have in the light of molecular phylogenetic evidence been revealed to paraphyletic. A number of generic segregates have been consequently delineated from within each of them, but polymorphism has persisted, suggesting the existence of further paraphyly. The aim of this study is to address this remaining paraphyly, using a combined morphological, molecular and biogeographical approach to investigate generic limits and define segregate genera. The work herein creates a new segregate genus from within Bauhinia s.l., based upon morphological, molecular, palynological, and biogeographical evidence. Details of the composition of two further generic segregates of Bauhinia s.l. are presented, their geographical distributions described, and the relevance of this to the generic limits explored. The status of the putative segregate genus Lasiobema is examined, with novel data on a poorly known species of the genus presented. The monophyly of Mezoneuron, a segregate genus of Caesalpinia s.l., is demonstrated with morphological and molecular data, and infrageneric relationships are explained. Preliminary findings reconstructing the evolutionary and biogeographical history of the genus are discussed. This study represents substantial progress towards resolving generic limits within two of the major groups of the Caesalpinioideae (sensu traditional), and provides data upon which further such studies can be built, setting the framework for identification and resolution of the remaining paraphyly

Checklist of the Caesalpinioideae (Leguminosae) of Equatorial Guinea (Annobón, Bioko and Río Muni)

This study provides a checklist of the Caesalpinioideae (Leguminosae) present in Equatorial Guinea, comprising 52 genera and 124 taxa. Seven species are known from Annobón, 33 from Bioko and 109 from Río Muni. The best represented genus is Senna with eight species. In addition, bibliographic references for Caesalpinioideae (Leguminosae) from Equatorial Guinea have been gathered and checked. Fourteen species are included based on literature records, because their distribution ranges suggest they may occur in Equatorial Guinea, 11 introduced species could be naturalized, and 45 taxa are recorded for the first time from the country. This represents an increase of over 35% in the floristic knowledge of Caesalpinioideae from Equatorial Guinea. A statistical summary is presented at the end of the checklist.Peer reviewe

Diversification of African tree legumes in Miombo-Mopane woodlands

The southern African Miombo and Mopane ecoregions constitute a unique repository of plant diversity whose diversification and evolutionary history is still understudied. In this work, we assessed the diversity, distribution, and conservation status of Miombo and Mopane tree legumes within the Zambezian phytoregion. Data were retrieved from several plant and gene databases and phylogenetic analyses were performed based on genetic barcodes. Seventy-eight species (74 from Miombo and 23 from Mopane, 19 common to both ecoregions) have been scored. Species diversity was high within both ecoregions, but information about the actual conservation status is scarce and available only for ca. 15% of the species. Results of phylogenetic analyses were consistent with current legume classification but did not allow us to draw any conclusion regarding the evolutionary history of Miombo and Mopane tree legumes. Future studies are proposed to dissect the diversity and structure of key species in order to consolidate the network of conservation areasinfo:eu-repo/semantics/publishedVersio

Phylogenomic analysis of 997 nuclear genes reveals the need for extensive generic re-delimitation in Caesalpinioideae (Leguminosae)

Subfamily Caesalpinioideae with ca. 4,600 species in 152 genera is the second-largest subfamily of legumes (Leguminosae) and forms an ecologically and economically important group of trees, shrubs and lianas with a pantropical distribution. Despite major advances in the last few decades towards aligning genera with clades across Caesalpinioideae, generic delimitation remains in a state of considerable flux, especially across the mimosoid clade. We test the monophyly of genera across Caesalpinioideae via phylogenomic analysis of 997 nuclear genes sequenced via targeted enrichment (Hybseq) for 420 species and 147 of the 152 genera currently recognised in the subfamily. We show that 22 genera are non-monophyletic or nested in other genera and that non-monophyly is concentrated in the mimosoid clade where ca. 25% of the 90 genera are found to be non-monophyletic. We suggest two main reasons for this pervasive generic non-monophyly: (i) extensive morphological homoplasy that we document here for a handful of important traits and, particularly, the repeated evolution of distinctive fruit types that were historically emphasised in delimiting genera and (ii) this is an artefact of the lack of pantropical taxonomic syntheses and sampling in previous phylogenies and the consequent failure to identify clades that span the Old World and New World or conversely amphi-Atlantic genera that are non-monophyletic, both of which are critical for delimiting genera across this large pantropical clade. Finally, we discuss taxon delimitation in the phylogenomic era and especially how assessing patterns of gene tree conflict can provide additional insights into generic delimitation. This new phylogenomic framework provides the foundations for a series of papers reclassifying genera that are presented here in Advances in Legume Systematics (ALS) 14 Part 1, for establishing a new higher-level phylogenetic tribal and clade-based classification of Caesalpinioideae that is the focus of ALS14 Part 2 and for downstream analyses of evolutionary diversification and biogeography of this important group of legumes which are presented elsewhere