DAPHNE: An Open and Extensible System Infrastructure for Integrated Data Analysis Pipelines

Integrated data analysis (IDA) pipelines—that combine data management (DM) and query processing, high-performance computing (HPC), and machine learning (ML) training and scoring—become increasingly common in practice. Interestingly, systems of these areas share many compilation and runtime techniques, and the used—increasingly heterogeneous—hardware infrastructure converges as well. Yet, the programming paradigms, cluster resource management, data formats and representations, as well as execution strategies differ substantially. DAPHNE is an open and extensible system infrastructure for such IDA pipelines, including language abstractions, compilation and runtime techniques, multi-level scheduling, hardware (HW) accelerators, and computational storage for increasing productivity and eliminating unnecessary overheads. In this paper, we make a case for IDA pipelines, describe the overall DAPHNE system architecture, its key components, and the design of a vectorized execution engine for computational storage, HW accelerators, as well as local and distributed operations. Preliminary experiments that compare DAPHNE with MonetDB, Pandas, DuckDB, and TensorFlow show promising results

Transparent Forecasting Strategies in Database Management Systems

Whereas traditional data warehouse systems assume that data is complete or has been carefully preprocessed, increasingly more data is imprecise, incomplete, and inconsistent. This is especially true in the context of big data, where massive amount of data arrives continuously in real-time from vast data sources. Nevertheless, modern data analysis involves sophisticated statistical algorithm that go well beyond traditional BI and, additionally, is increasingly performed by non-expert users. Both trends require transparent data mining techniques that efficiently handle missing data and present a complete view of the database to the user. Time series forecasting estimates future, not yet available, data of a time series and represents one way of dealing with missing data. Moreover, it enables queries that retrieve a view of the database at any point in time - past, present, and future. This article presents an overview of forecasting techniques in database management systems. After discussing possible application areas for time series forecasting, we give a short mathematical background of the main forecasting concepts. We then outline various general strategies of integrating time series forecasting inside a database and discuss some individual techniques from the database community. We conclude this article by introducing a novel forecasting-enabled database management architecture that natively and transparently integrates forecast models

Evaluating end-to-end optimization for data analytics applications in weld

Modern analytics applications use a diverse mix of libraries and functions. Unfortunately, there is no optimization across these libraries, resulting in performance penalties as high as an order of magnitude in many applications. To address this problem, we proposed Weld, a common runtime for existing data analytics libraries that performs key physical optimizations such as pipelining under existing, imperative library APIs. In this work, we further develop the Weld vision by designing an automatic adaptive optimizer for Weld applications, and evaluating its impact on realistic data science workloads. Our optimizer eliminates multiple forms of overhead that arise when composing imperative libraries like Pandas and NumPy, and uses lightweight measurements to make data-dependent decisions at run-time in ad-hoc workloads where no statistics are available, with sub-second overhead. We also evaluate which optimizations have the largest impact in practice and whether Weld can be integrated into libraries incrementally. Our results are promising: using our optimizer, Weld accelerates data science workloads by up to 23X on one thread and 80X on eight threads, and its adaptive optimizations provide up to a 3.75X speedup over rule-based optimization. Moreover, Weld provides benefits if even just 4--5 operators in a library are ported to use it. Our results show that common runtime designs like Weld may be a viable approach to accelerate analytics

Optimization techniques for human computation-enabled data processing systems

Thesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 2012.Cataloged from PDF version of thesis.Includes bibliographical references (p. 119-124).Crowdsourced labor markets make it possible to recruit large numbers of people to complete small tasks that are difficult to automate on computers. These marketplaces are increasingly widely used, with projections of over $1 billion being transferred between crowd employers and crowd workers by the end of 2012. While crowdsourcing enables forms of computation that artificial intelligence has not yet achieved, it also presents crowd workflow designers with a series of challenges including describing tasks, pricing tasks, identifying and rewarding worker quality, dealing with incorrect responses, and integrating human computation into traditional programming frameworks. In this dissertation, we explore the systems-building, operator design, and optimization challenges involved in building a crowd-powered workflow management system. We describe a system called Qurk that utilizes techniques from databases such as declarative workflow definition, high-latency workflow execution, and query optimization to aid crowd-powered workflow developers. We study how crowdsourcing can enhance the capabilities of traditional databases by evaluating how to implement basic database operators such as sorts and joins on datasets that could not have been processed using traditional computation frameworks. Finally, we explore the symbiotic relationship between the crowd and query optimization, enlisting crowd workers to perform selectivity estimation, a key component in optimizing complex crowd-powered workflows.by Adam Marcus.Ph.D

A comparison of statistical machine learning methods in heartbeat detection and classification

In health care, patients with heart problems require quick responsiveness in a clinical setting or in the operating theatre. Towards that end, automated classification of heartbeats is vital as some heartbeat irregularities are time consuming to detect. Therefore, analysis of electro-cardiogram (ECG) signals is an active area of research. The methods proposed in the literature depend on the structure of a heartbeat cycle. In this paper, we use interval and amplitude based features together with a few samples from the ECG signal as a feature vector. We studied a variety of classification algorithms focused especially on a type of arrhythmia known as the ventricular ectopic fibrillation (VEB). We compare the performance of the classifiers against algorithms proposed in the literature and make recommendations regarding features, sampling rate, and choice of the classifier to apply in a real-time clinical setting. The extensive study is based on the MIT-BIH arrhythmia database. Our main contribution is the evaluation of existing classifiers over a range sampling rates, recommendation of a detection methodology to employ in a practical setting, and extend the notion of a mixture of experts to a larger class of algorithms