Machine learning methods for histopathological image analysis

Abundant accumulation of digital histopathological images has led to the increased demand for their analysis, such as computer-aided diagnosis using machine learning techniques. However, digital pathological images and related tasks have some issues to be considered. In this mini-review, we introduce the application of digital pathological image analysis using machine learning algorithms, address some problems specific to such analysis, and propose possible solutions.Comment: 23 pages, 4 figure

A review of content-based video retrieval techniques for person identification

The rise of technology spurs the advancement in the surveillance field. Many commercial spaces reduced the patrol guard in favor of Closed-Circuit Television (CCTV) installation and even some countries already used surveillance drone which has greater mobility. In recent years, the CCTV Footage have also been used for crime investigation by law enforcement such as in Boston Bombing 2013 incident. However, this led us into producing huge unmanageable footage collection, the common issue of Big Data era. While there is more information to identify a potential suspect, the massive size of data needed to go over manually is a very laborious task. Therefore, some researchers proposed using Content-Based Video Retrieval (CBVR) method to enable to query a specific feature of an object or a human. Due to the limitations like visibility and quality of video footage, only certain features are selected for recognition based on Chicago Police Department guidelines. This paper presents the comprehensive reviews on CBVR techniques used for clothing, gender and ethnic recognition of the person of interest and how can it be applied in crime investigation. From the findings, the three recognition types can be combined to create a Content-Based Video Retrieval system for person identification

Experimenting Liver Fibrosis Diagnostic by Two Photon Excitation Microscopy and Bag-of-Features Image Classification

The accurate staging of liver fibrosis is of paramount importance to determine the state of disease progression, therapy responses, and to optimize disease treatment strategies. Non-linear optical microscopy techniques such as two-photon excitation fluorescence (TPEF) and second harmonic generation (SHG) can image the endogenous signals of tissue structures and can be used for fibrosis assessment on non-stained tissue samples. While image analysis of collagen in SHG images was consistently addressed until now, cellular and tissue information included in TPEF images, such as inflammatory and hepatic cell damage, equally important as collagen deposition imaged by SHG, remain poorly exploited to date. We address this situation by experimenting liver fibrosis quantification and scoring using a combined approach based on TPEF liver surface imaging on a Thioacetamide-induced rat model and a gradient based Bag-of-Features (BoF) image classification strategy. We report the assessed performance results and discuss the influence of specific BoF parameters to the performance of the fibrosis scoring framework.Romania. Executive Agency for Higher Education, Research, Development and Innovation Funding (research grant PN-II-PT-PCCA-2011-3.2-1162)Rectors' Conference of the Swiss Universities (SCIEX NMS-CH research fellowship nr. 12.135)Singapore. Agency for Science, Technology and Research (R-185-000-182-592)Singapore. Biomedical Research CouncilInstitute of Bioengineering and Nanotechnology (Singapore)Singapore-MIT Alliance (Computational and Systems Biology Flagship Project funding (C-382-641-001-091))Singapore-MIT Alliance for Research and Technology (SMART BioSyM and Mechanobiology Institute of Singapore (R-714-001-003-271)

Pedestrian detection and counting in surveillance videos

"December 2013.""A Thesis presented to the Faculty of the Graduate School at the University of Missouri In Partial Fulfillment of the Requirements for the Degree Master of Science."Thesis supervisor: Dr. Zhihai He.Pedestrian detection and counting have important application in video surveillance for entrance monitoring, customer behavior analysis, and public service management. In this thesis, we propose an accurate, reliable and fast method for pedestrian detection and counting in video surveillance. To this end, we first develop an effective method for background modeling, subtraction, update, and shadow removal. To effectively differentiate person image patches from other background patches, we develop a head-shoulder classification and detection method. A foreground mask curve analysis method is to determine the possible position of persons, and then use a SVM (Support Vector Machine) classifier with HOG (Histogram of Oriented) feature and bag of words to detect the head-shoulder of people. Based on the foreground detection and head-shoulder classification at each frame, we develop a person counting algorithm in the temporal domain to analyze the frame-level classification results. Our experiments with real-world surveillance videos demonstrate the proposed method has achieved accurate and reliable pedestrian detection and counting.Includes bibliographical references (pages 46-54)