A network approach for managing and processing big cancer data in clouds

Translational cancer research requires integrative analysis of multiple levels of big cancer data to identify and treat cancer. In order to address the issues that data is decentralised, growing and continually being updated, and the content living or archiving on different information sources partially overlaps creating redundancies as well as contradictions and inconsistencies, we develop a data network model and technology for constructing and managing big cancer data. To support our data network approach for data process and analysis, we employ a semantic content network approach and adopt the CELAR cloud platform. The prototype implementation shows that the CELAR cloud can satisfy the on-demanding needs of various data resources for management and process of big cancer data

Context-aware Dynamic Discovery and Configuration of 'Things' in Smart Environments

The Internet of Things (IoT) is a dynamic global information network consisting of Internet-connected objects, such as RFIDs, sensors, actuators, as well as other instruments and smart appliances that are becoming an integral component of the future Internet. Currently, such Internet-connected objects or `things' outnumber both people and computers connected to the Internet and their population is expected to grow to 50 billion in the next 5 to 10 years. To be able to develop IoT applications, such `things' must become dynamically integrated into emerging information networks supported by architecturally scalable and economically feasible Internet service delivery models, such as cloud computing. Achieving such integration through discovery and configuration of `things' is a challenging task. Towards this end, we propose a Context-Aware Dynamic Discovery of {Things} (CADDOT) model. We have developed a tool SmartLink, that is capable of discovering sensors deployed in a particular location despite their heterogeneity. SmartLink helps to establish the direct communication between sensor hardware and cloud-based IoT middleware platforms. We address the challenge of heterogeneity using a plug in architecture. Our prototype tool is developed on an Android platform. Further, we employ the Global Sensor Network (GSN) as the IoT middleware for the proof of concept validation. The significance of the proposed solution is validated using a test-bed that comprises 52 Arduino-based Libelium sensors.Comment: Big Data and Internet of Things: A Roadmap for Smart Environments, Studies in Computational Intelligence book series, Springer Berlin Heidelberg, 201

Performance Analysis of Publish/Subscribe Systems

The Desktop Grid offers solutions to overcome several challenges and to answer increasingly needs of scientific computing. Its technology consists mainly in exploiting resources, geographically dispersed, to treat complex applications needing big power of calculation and/or important storage capacity. However, as resources number increases, the need for scalability, self-organisation, dynamic reconfigurations, decentralisation and performance becomes more and more essential. Since such properties are exhibited by P2P systems, the convergence of grid computing and P2P computing seems natural. In this context, this paper evaluates the scalability and performance of P2P tools for discovering and registering services. Three protocols are used for this purpose: Bonjour, Avahi and Free-Pastry. We have studied the behaviour of theses protocols related to two criteria: the elapsed time for registrations services and the needed time to discover new services. Our aim is to analyse these results in order to choose the best protocol we can use in order to create a decentralised middleware for desktop grid

Lessons Learned from a Decade of Providing Interactive, On-Demand High Performance Computing to Scientists and Engineers

For decades, the use of HPC systems was limited to those in the physical sciences who had mastered their domain in conjunction with a deep understanding of HPC architectures and algorithms. During these same decades, consumer computing device advances produced tablets and smartphones that allow millions of children to interactively develop and share code projects across the globe. As the HPC community faces the challenges associated with guiding researchers from disciplines using high productivity interactive tools to effective use of HPC systems, it seems appropriate to revisit the assumptions surrounding the necessary skills required for access to large computational systems. For over a decade, MIT Lincoln Laboratory has been supporting interactive, on-demand high performance computing by seamlessly integrating familiar high productivity tools to provide users with an increased number of design turns, rapid prototyping capability, and faster time to insight. In this paper, we discuss the lessons learned while supporting interactive, on-demand high performance computing from the perspectives of the users and the team supporting the users and the system. Building on these lessons, we present an overview of current needs and the technical solutions we are building to lower the barrier to entry for new users from the humanities, social, and biological sciences.Comment: 15 pages, 3 figures, First Workshop on Interactive High Performance Computing (WIHPC) 2018 held in conjunction with ISC High Performance 2018 in Frankfurt, German

Middleware Technologies for Cloud of Things - a survey

The next wave of communication and applications rely on the new services provided by Internet of Things which is becoming an important aspect in human and machines future. The IoT services are a key solution for providing smart environments in homes, buildings and cities. In the era of a massive number of connected things and objects with a high grow rate, several challenges have been raised such as management, aggregation and storage for big produced data. In order to tackle some of these issues, cloud computing emerged to IoT as Cloud of Things (CoT) which provides virtually unlimited cloud services to enhance the large scale IoT platforms. There are several factors to be considered in design and implementation of a CoT platform. One of the most important and challenging problems is the heterogeneity of different objects. This problem can be addressed by deploying suitable "Middleware". Middleware sits between things and applications that make a reliable platform for communication among things with different interfaces, operating systems, and architectures. The main aim of this paper is to study the middleware technologies for CoT. Toward this end, we first present the main features and characteristics of middlewares. Next we study different architecture styles and service domains. Then we presents several middlewares that are suitable for CoT based platforms and lastly a list of current challenges and issues in design of CoT based middlewares is discussed.Comment: http://www.sciencedirect.com/science/article/pii/S2352864817301268, Digital Communications and Networks, Elsevier (2017

Middleware Technologies for Cloud of Things - a survey

The next wave of communication and applications rely on the new services provided by Internet of Things which is becoming an important aspect in human and machines future. The IoT services are a key solution for providing smart environments in homes, buildings and cities. In the era of a massive number of connected things and objects with a high grow rate, several challenges have been raised such as management, aggregation and storage for big produced data. In order to tackle some of these issues, cloud computing emerged to IoT as Cloud of Things (CoT) which provides virtually unlimited cloud services to enhance the large scale IoT platforms. There are several factors to be considered in design and implementation of a CoT platform. One of the most important and challenging problems is the heterogeneity of different objects. This problem can be addressed by deploying suitable "Middleware". Middleware sits between things and applications that make a reliable platform for communication among things with different interfaces, operating systems, and architectures. The main aim of this paper is to study the middleware technologies for CoT. Toward this end, we first present the main features and characteristics of middlewares. Next we study different architecture styles and service domains. Then we presents several middlewares that are suitable for CoT based platforms and lastly a list of current challenges and issues in design of CoT based middlewares is discussed.Comment: http://www.sciencedirect.com/science/article/pii/S2352864817301268, Digital Communications and Networks, Elsevier (2017

City Data Fusion: Sensor Data Fusion in the Internet of Things

Internet of Things (IoT) has gained substantial attention recently and play a significant role in smart city application deployments. A number of such smart city applications depend on sensor fusion capabilities in the cloud from diverse data sources. We introduce the concept of IoT and present in detail ten different parameters that govern our sensor data fusion evaluation framework. We then evaluate the current state-of-the art in sensor data fusion against our sensor data fusion framework. Our main goal is to examine and survey different sensor data fusion research efforts based on our evaluation framework. The major open research issues related to sensor data fusion are also presented.Comment: Accepted to be published in International Journal of Distributed Systems and Technologies (IJDST), 201

Middleware platform for distributed applications incorporating robots, sensors and the cloud

Cyber-physical systems in the factory of the future will consist of cloud-hosted software governing an agile production process executed by autonomous mobile robots and controlled by analyzing the data from a vast number of sensors. CPSs thus operate on a distributed production floor infrastructure and the set-up continuously changes with each new manufacturing task. In this paper, we present our OSGibased middleware that abstracts the deployment of servicebased CPS software components on the underlying distributed platform comprising robots, actuators, sensors and the cloud. Moreover, our middleware provides specific support to develop components based on artificial neural networks, a technique that recently became very popular for sensor data analytics and robot actuation. We demonstrate a system where a robot takes actions based on the input from sensors in its vicinity