Weak functional dependencies on trees with restructuring

We present an axiomatisation for weak functional dependencies, i.e. disjunctions of functional dependencies, in the presence of several constructors for complex values. The investigated constructors capture records, sets, multisets, lists, disjoint union and optionality, i.e. the complex values are indeed trees. The constructors cover the gist of all complex value data models including object oriented databases and XML. Functional and weak functional dependencies are expressed on a lattice of subattributes, which even carries the structure of a Brouwer algebra as long as the union-constructor is absent. Its presence, however, complicates all results and proofs significantly. The reason for this is that the union-constructor causes non-trivial restructuring rules to hold. In particular, if either the set- or the the union-constructor is absent, a subset of the rules is complete for the implication of ordinary functional dependencies, while in the general case no finite axiomatisation for functional dependencies exists

On Incomplete XML Documents with Integrity Constraints

Abstract. We consider incomplete specifications of XML documents in the presence of schema information and integrity constraints. We show that integrity constraints such as keys and foreign keys affect consistency of such specifications. We prove that the consistency problem for incomplete specifications with keys and foreign keys can always be solved in NP. We then show a dichotomy result, classifying the complexity of the problem as NP-complete or PTIME, depending on the precise set of features used in incomplete descriptions.

Privacy Architectures: Reasoning About Data Minimisation and Integrity

Privacy by design will become a legal obligation in the European Community if the Data Protection Regulation eventually gets adopted. However, taking into account privacy requirements in the design of a system is a challenging task. We propose an approach based on the specification of privacy architectures and focus on a key aspect of privacy, data minimisation, and its tension with integrity requirements. We illustrate our formal framework through a smart metering case study.Comment: appears in STM - 10th International Workshop on Security and Trust Management 8743 (2014

Multi-agent planning using an abductive : event calculus

Temporal reasoning within distributed Artificial Intelligence Systems is faced with the problem of concurrent streams of action. Well known, logic-based systems using the SITUATION CALCULUS solve the frame problem in a purely linear manner. Recent research, however, has revealed that the EVENT CALCULUS under the abduction principle is capable of nonlinear planning. In this report, we present a planning service module which incorporates this approach into a constraint logic framework and even allows a notion of strong nonlinearity. The work includes the axiomatisation of appropriate versions of the EVENT CALCULUS, the development of a suitably sound and complete proof procedure that supports abduction and the implementation of both of these layers on the constraint platform OZ. We demonstrate prototypically how this module, EVE, can be integrated into an existing multi-agent architecture and evaluate the behaviour of such agents within an application domain, the loading dock scenario

Strongly possible functional dependencies for SQL

Missing data is a large-scale challenge to research and investigate. It reduces the statistical power and produces negative consequences that may introduce selection bias on the data. Many approaches to handle this problem have been introduced. The main approaches suggested are either missing values to be ignored (removed) or imputed (filled in) with new values. This paper uses the second method. Possible worlds and possible and certain keys were introduced in Köhler et.al., and by Levene et.al. Köhler and Link introduced certain functional dependencies (c-FD) as a natural complement to Lien's class of possible functional dependencies (p-FD). Weak and strong functional dependencies were studied by Levene and Loizou. We introduced the intermediate concept of strongly possible worlds that are obtained by imputing values already existing in the table in a preceding paper. This results in strongly possible keys (spKey's) and strongly possible functional dependencies (spFD's). We give a polynomial algorithm to verify a single spKey and show that in general, it is NP-complete to verify an arbitrary collection of spKeys. We give a graph-theoretical characterization of the validity of a given spFD X →sp Y. We show, that the complexity to verify a single strongly possible functional dependency is NP-complete in general, then we introduce some cases when verifying a single spFD can be done in polynomial time. As a step forward axiomatization of spFD's, the rules given for weak and strong functional dependencies are checked. Appropriate weakenings of those that are not sound for spFD's are listed. The interaction between spFD's and spKey's and certain keys is studied. Furthermore, a graph theoretical characterization of implication between singular attribute spFD's is given

The Ontology of Biological Attributes (OBA)-computational traits for the life sciences.

Existing phenotype ontologies were originally developed to represent phenotypes that manifest as a character state in relation to a wild-type or other reference. However, these do not include the phenotypic trait or attribute categories required for the annotation of genome-wide association studies (GWAS), Quantitative Trait Loci (QTL) mappings or any population-focussed measurable trait data. The integration of trait and biological attribute information with an ever increasing body of chemical, environmental and biological data greatly facilitates computational analyses and it is also highly relevant to biomedical and clinical applications. The Ontology of Biological Attributes (OBA) is a formalised, species-independent collection of interoperable phenotypic trait categories that is intended to fulfil a data integration role. OBA is a standardised representational framework for observable attributes that are characteristics of biological entities, organisms, or parts of organisms. OBA has a modular design which provides several benefits for users and data integrators, including an automated and meaningful classification of trait terms computed on the basis of logical inferences drawn from domain-specific ontologies for cells, anatomical and other relevant entities. The logical axioms in OBA also provide a previously missing bridge that can computationally link Mendelian phenotypes with GWAS and quantitative traits. The term components in OBA provide semantic links and enable knowledge and data integration across specialised research community boundaries, thereby breaking silos