COVID-19 Prediction Infrastructure Using Deep Learning

Coronavirus can lead to respiratory illnesses ranging from mild to severe, and even death, which makes early detection critical. However, current COVID-19 (Coronavirus Disease 2019) detection methods are not only expensive but also time-consuming. This poses a challenge, especially with an increasing number of patients and demand for testing kits. Waiting for test results for a few days is not ideal, as the outbreak can spread quickly in the meantime. To address this issue, we propose a COVID-19 prediction infrastructure using deep learning. This innovative android-based application uses a Convolutional Neural Network model, trained on a custom dataset with an accuracy of 97 percent, to predict whether COVID-19 is present or not. With this fast and low-cost approach, users can quickly detect COVID-19 and take appropriate actions to reduce the risk of transmission

Ensemble Federated Learning: An approach for collaborative pneumonia diagnosis

Federated learning is a very convenient approach for scenarios where (i) the exchange of data implies privacy concerns and/or (ii) a quick reaction is needed. In smart healthcare systems, both aspects are usually required. In this paper, we work on the first scenario, where preserving privacy is key and, consequently, building a unique and massive medical image data set by fusing different data sets from different medical institutions or research centers (computation nodes) is not an option. We propose an ensemble federated learning (EFL) approach that is based on the following characteristics: First, each computation node works with a different data set (but of the same type). They work locally and apply an ensemble approach combining eight well-known CNN models (densenet169, mobilenetv2, xception, inceptionv3, vgg16, resnet50, densenet121, and resnet152v2) on Chest X-ray images. Second, the best two local models are used to create a local ensemble model that is shared with a central node. Third, the ensemble models are aggregated to obtain a global model, which is shared with the computation nodes to continue with a new iteration. This procedure continues until there are no changes in the best local models. We have performed different experiments to compare our approach with centralized ones (with or without an ensemble approach). The results conclude that our proposal outperforms these ones in Chest X-ray images (achieving an accuracy of 96.63%) and offers very competitive results compared to other proposals in the literature. A source code is provided at the Code Ocean repository: https://codeocean.com/capsule/0530602/treeXunta de Galicia | Ref. (Centro de investigación de Galicia accreditation 2019– 2022)Universidade de Vigo/CISUGMinisterio de Ciencia e Innovación | Ref. PID2020-113795RB-C3

Deep Learning Models For Biomedical Data Analysis

The field of biomedical data analysis is a vibrant area of research dedicated to extracting valuable insights from a wide range of biomedical data sources, including biomedical images and genomics data. The emergence of deep learning, an artificial intelligence approach, presents significant prospects for enhancing biomedical data analysis and knowledge discovery. This dissertation focused on exploring innovative deep-learning methods for biomedical image processing and gene data analysis. During the COVID-19 pandemic, biomedical imaging data, including CT scans and chest x-rays, played a pivotal role in identifying COVID-19 cases by categorizing patient chest x-ray outcomes as COVID-19-positive or negative. While supervised deep learning methods have effectively recognized COVID-19 patterns in chest x-ray datasets, the availability of annotated training data remains limited. To address this challenge, the thesis introduced a semi-supervised deep learning model named ssResNet, built upon the Residual Neural Network (ResNet) architecture. The model combines supervised and unsupervised paths, incorporating a weighted supervised loss function to manage data imbalance. The strategies to diminish prediction uncertainty in deep learning models for critical applications like medical image processing is explore. It achieves this through an ensemble deep learning model, integrating bagging deep learning and model calibration techniques. This ensemble model not only boosts biomedical image segmentation accuracy but also reduces prediction uncertainty, as validated on a comprehensive chest x-ray image segmentation dataset. Furthermore, the thesis introduced an ensemble model integrating Proformer and ensemble learning methodologies. This model constructs multiple independent Proformers for predicting gene expression, their predictions are combined through weighted averaging to generate final predictions. Experimental outcomes underscore the efficacy of this ensemble model in enhancing prediction performance across various metrics. In conclusion, this dissertation advances biomedical data analysis by harnessing the potential of deep learning techniques. It devises innovative approaches for processing biomedical images and gene data. By leveraging deep learning\u27s capabilities, this work paves the way for further progress in biomedical data analytics and its applications within clinical contexts. Index Terms- biomedical data analysis, COVID-19, deep learning, ensemble learning, gene data analytics, medical image segmentation, prediction uncertainty, Proformer, Residual Neural Network (ResNet), semi-supervised learning

Evolving Deep Learning Convolutional Neural Networks for Early COVID-19 Detection in Chest X-ray Images

This article proposes a framework that automatically designs classifiers for the early detection of COVID-19 from chest X-ray images. To do this, our approach repeatedly makes use of a heuristic for optimisation to efficiently find the best combination of the hyperparameters of a convolutional deep learning model. The framework starts with optimising a basic convolutional neural network which represents the starting point for the evolution process. Subsequently, at most two additional convolutional layers are added, at a time, to the previous convolutional structure as a result of a further optimisation phase. Each performed phase maximises the the accuracy of the system, thus requiring training and assessment of the new model, which gets gradually deeper, with relevant COVID-19 chest X-ray images. This iterative process ends when no improvement, in terms of accuracy, is recorded. Hence, the proposed method evolves the most performing network with the minimum number of convolutional layers. In this light, we simultaneously achieve high accuracy while minimising the presence of redundant layers to guarantee a fast but reliable model. Our results show that the proposed implementation of such a framework achieves accuracy up to 99.11%, thus being particularly suitable for the early detection of COVID-19

Artificial intelligence for advanced manufacturing quality

100 p.This Thesis addresses the challenge of AI-based image quality control systems applied to manufacturing industry, aiming to improve this field through the use of advanced techniques for data acquisition and processing, in order to obtain robust, reliable and optimal systems. This Thesis presents contributions onthe use of complex data acquisition techniques, the application and design of specialised neural networks for the defect detection, and the integration and validation of these systems in production processes. It has been developed in the context of several applied research projects that provided a practical feedback of the usefulness of the proposed computational advances as well as real life data for experimental validation

Explainable artificial intelligence (XAI) in deep learning-based medical image analysis

With an increase in deep learning-based methods, the call for explainability of such methods grows, especially in high-stakes decision making areas such as medical image analysis. This survey presents an overview of eXplainable Artificial Intelligence (XAI) used in deep learning-based medical image analysis. A framework of XAI criteria is introduced to classify deep learning-based medical image analysis methods. Papers on XAI techniques in medical image analysis are then surveyed and categorized according to the framework and according to anatomical location. The paper concludes with an outlook of future opportunities for XAI in medical image analysis.Comment: Submitted for publication. Comments welcome by email to first autho